Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003871g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 9.7e-46 186.4 92 100.0
Nitab4.5_0008568g0070 Nicotiana tabacum HOM05D007569 ORTHO05D009268 7.9e-40 166.8 85 95.3
Peaxi162Scf00472g00312 Petunia axillaris HOM05D007569 ORTHO05D009268 9.1e-28 126.7 92 69.6
Solyc10g150149.1 Solanum lycopersicum HOM05D007569 ORTHO05D009268 2.1e-24 115.5 94 63.8
Dinv35729 Davidia involucrata HOM05D007569 ORTHO05D009268 6.8e-23 110.5 92 63.0
Peaxi162Scf00005g00394 Petunia axillaris HOM05D007569 ORTHO05D009268 2.0e-22 109.0 94 66.0
Nitab4.5_0006156g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 7.5e-22 107.1 94 62.8
Nitab4.5_0000669g0110 Nicotiana tabacum HOM05D007569 ORTHO05D009268 1.2e-19 99.8 95 60.0
Actinidia19698 Actinidia chinensis HOM05D007569 ORTHO05D009268 9.5e-17 90.1 92 54.3
Oeu026850.1 Olea europaea HOM05D007569 ORTHO05D009268 1.8e-15 85.9 93 50.5
PGSC0003DMG400001743 Solanum tuberosum HOM05D007569 ORTHO05D009268 2.3e-15 85.5 95 58.9
CSS0032625 Camellia sinensis var. sinensis HOM05D007569 ORTHO05D009268 3.0e-15 85.1 94 50.0
Cc06_g03690 Coffea canephora HOM05D007569 ORTHO05D009268 9.8e-14 80.1 90 50.0
GSVIVG01025645001 Vitis vinifera HOM05D007569 ORTHO05D009268 8.3e-13 77.0 84 51.2
Actinidia05265 Actinidia chinensis HOM05D007569 ORTHO05D009268 1.0e-10 70.1 92 44.6
Ciclev10013224m.g Citrus clementina HOM05D007569 ORTHO05D009268 1.1e-09 66.6 94 47.9
Nn2g13029 Nelumbo nucifera HOM05D007569 ORTHO05D009268 1.5e-09 66.2 90 45.6
Peaxi162Scf00488g00927 Petunia axillaris HOM05D007569 ORTHO05D009268 1.5e-09 66.2 44 68.2
Potri.016G087000 Populus trichocarpa HOM05D007569 ORTHO05D009268 1.5e-09 66.2 93 45.2
Oeu060096.1 Olea europaea HOM05D007569 ORTHO05D009268 2.5e-09 65.5 84 47.6
CiPaw.09G178900 Carya illinoinensis HOM05D007569 ORTHO05D009268 3.3e-09 65.1 97 45.4
Potri.006G130400 Populus trichocarpa HOM05D007569 ORTHO05D009268 3.3e-09 65.1 93 45.2
Solyc09g007480.3 Solanum lycopersicum HOM05D007569 ORTHO05D009268 3.3e-09 65.1 91 48.4
Sabra16G0093200 Salix brachista HOM05D007569 ORTHO05D009268 5.6e-09 64.3 93 43.0
Prupe.6G240500 Prunus persica HOM05D007569 ORTHO05D009268 7.3e-09 63.9 92 42.4
TAR623G1008 Trochodendron aralioides HOM05D007569 ORTHO05D009268 7.3e-09 63.9 77 46.8
CiPaw.10G136600 Carya illinoinensis HOM05D007569 ORTHO05D009268 1.2e-08 63.2 94 46.8
Lsat_1_v5_gn_6_30260 Lactuca sativa HOM05D007569 ORTHO05D009268 1.6e-08 62.8 98 41.8
RhsimUnG0115600 Rhododendron simsii HOM05D007569 ORTHO05D009268 1.6e-08 62.8 82 46.3
CANSAT80G1933 Cannabis sativa HOM05D007569 ORTHO05D009268 2.1e-08 62.4 90 42.2
CiPaw.10G136400 Carya illinoinensis HOM05D007569 ORTHO05D009268 2.8e-08 62.0 94 45.7
Haze_20627 Corylus avellana HOM05D007569 ORTHO05D009268 2.8e-08 62.0 94 46.8
QL07p045078 Quercus lobata HOM05D007569 ORTHO05D009268 4.7e-08 61.2 91 41.8
Oeu059987.1 Olea europaea HOM05D007569 ORTHO05D009268 6.1e-08 60.8 63 54.0
Cpa.g.sc368.3 Carica papaya HOM05D007569 ORTHO05D009268 1.4e-07 59.7 94 44.7
Manes.08G004500 Manihot esculenta HOM05D007569 ORTHO05D009268 1.4e-07 59.7 92 46.7
Migut.L01668 Erythranthe guttata HOM05D007569 ORTHO05D009268 1.8e-07 59.3 70 48.6
Medtr7g100860 Medicago truncatula HOM05D007569 ORTHO05D009268 2.3e-07 58.9 88 40.9
Aqoxy4G03229 Aquilegia oxysepala HOM05D007569 ORTHO05D009268 3.0e-07 58.5 85 40.0
COL.COLO4_27060 Corchorus olitorius HOM05D007569 ORTHO05D009268 3.0e-07 58.5 91 40.7
Duzib093G0005 Durio zibethinus HOM05D007569 ORTHO05D009268 3.0e-07 58.5 93 39.8
Thecc.05G055900 Theobroma cacao HOM05D007569 ORTHO05D009268 4.0e-07 58.2 90 41.1
ECA248G1179 Erigeron canadensis HOM05D007569 ORTHO05D009268 5.2e-07 57.8 92 39.1
MD04G1102400 Malus domestica HOM05D007569 ORTHO05D009268 5.2e-07 57.8 88 40.9
DCAR_020844 Daucus carota HOM05D007569 ORTHO05D009268 1.2e-06 56.6 59 47.5
Atru.chr8.1895 Acer truncatum HOM05D004499 ORTHO05D004928 1.5e-06 56.2 78 43.6
Lj5g0021553 Lotus japonicus HOM05D007569 ORTHO05D009268 1.5e-06 56.2 69 49.3
Psat6g070160 Pisum sativum HOM05D007569 ORTHO05D009268 1.5e-06 56.2 94 42.6
BcaC03g13030 Brassica carinata HOM05D007569 ORTHO05D009268 2.6e-06 55.5 59 47.5
C02p00800 Brassica napus HOM05D004310 ORTHO05D009268 2.6e-06 55.5 59 47.5
BraA02t04745Z Brassica rapa HOM05D007569 ORTHO05D009268 2.6e-06 55.5 59 47.5
TPR.G28044 Trifolium pratense HOM05D007569 ORTHO05D009268 2.6e-06 55.5 91 40.7
Gorai.013G026900 Gossypium raimondii HOM05D007569 ORTHO05D009268 4.4e-06 54.7 64 43.8
BcaB05g21850 Brassica carinata HOM05D007569 ORTHO05D009268 5.7e-06 54.3 59 47.5
Psat3g044160 Pisum sativum HOM05D007569 ORTHO05D009268 5.7e-06 54.3 66 45.5
Glyma.13G138100 Glycine max HOM05D007569 ORTHO05D009268 7.5e-06 53.9 99 39.4
Nn2g10705 Nelumbo nucifera HOM05D007569 ORTHO05D009268 7.5e-06 53.9 94 38.3
Medtr1g066720 Medicago truncatula HOM05D007569 ORTHO05D009268 9.8e-06 53.5 50 50.0


User provided reference genes

Program Settings