Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 1.3e-66 256.1 121 100.0
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 7.4e-62 240.4 121 92.6
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 7.4e-62 240.4 121 92.6
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 1.7e-61 239.2 121 91.7
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 1.4e-60 236.1 121 89.3
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 1.8e-60 235.7 121 90.1
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 7.0e-60 233.8 121 89.3
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 8.5e-58 226.9 119 85.7
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 1.9e-57 225.7 121 87.6
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 9.4e-57 223.4 119 84.9
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 9.4e-57 223.4 119 84.0
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 2.7e-56 221.9 118 85.6
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 4.7e-56 221.1 119 84.9
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 4.7e-56 221.1 119 84.9
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 6.1e-56 220.7 119 83.2
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 1.0e-55 219.9 119 84.0
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.4e-55 219.5 119 83.2
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 2.3e-55 218.8 119 82.4
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 3.0e-55 218.4 119 84.0
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 3.0e-55 218.4 119 83.2
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 5.2e-55 217.6 119 82.4
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 5.2e-55 217.6 119 84.9
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 6.7e-55 217.2 119 82.4
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 6.7e-55 217.2 120 85.0
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 8.8e-55 216.9 119 84.0
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 1.2e-54 216.5 119 83.2
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 1.5e-54 216.1 119 81.5
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.5e-54 216.1 119 81.5
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 2.6e-54 215.3 119 80.7
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 2.6e-54 215.3 119 83.2
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 9.7e-54 213.4 119 82.4
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 1.3e-53 213.0 119 82.4
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 1.3e-53 213.0 119 82.4
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 2.2e-53 212.2 119 80.7
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 8.2e-53 210.3 119 80.7
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 1.1e-52 209.9 126 81.0
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 1.8e-52 209.1 119 79.0
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 3.1e-52 208.4 119 79.8
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.0e-52 207.2 121 83.5
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.0e-52 207.2 121 83.5
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.0e-52 207.2 121 83.5
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 7.0e-52 207.2 119 79.0
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 9.1e-52 206.8 117 79.5
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 1.2e-51 206.5 122 82.0
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 1.2e-51 206.5 120 84.2
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 1.2e-51 206.5 119 78.2
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 1.2e-51 206.5 117 79.5
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 2.0e-51 205.7 121 82.6
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 2.0e-51 205.7 122 81.1
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.5e-51 204.9 121 82.6
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 5.9e-51 204.1 119 77.3
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 5.9e-51 204.1 119 78.2
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 1.0e-50 203.4 117 78.6
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 2.2e-50 202.2 119 77.3
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 6.5e-50 200.7 119 76.5
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 8.5e-50 200.3 117 78.6
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.5e-49 199.5 119 77.3
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 1.6e-48 196.1 116 75.9
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 2.7e-48 195.3 119 75.6
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 2.7e-48 195.3 120 76.7
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 4.7e-48 194.5 124 72.6
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 6.1e-48 194.1 115 76.5
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 1.0e-47 193.4 116 75.9
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 1.4e-47 193.0 117 74.4
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 1.8e-47 192.6 116 75.0
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 2.3e-47 192.2 116 75.0
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 2.3e-47 192.2 116 75.0
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 2.3e-47 192.2 116 75.0
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 2.3e-47 192.2 116 75.0
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 2.3e-47 192.2 124 72.6
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 3.0e-47 191.8 133 70.7
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 5.2e-47 191.0 116 75.0
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 5.2e-47 191.0 116 74.1
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 5.2e-47 191.0 116 74.1
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 1.2e-46 189.9 116 74.1
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 1.2e-46 189.9 116 74.1
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 2.6e-46 188.7 116 73.3
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 2.6e-46 188.7 116 73.3
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 2.6e-46 188.7 116 73.3
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 2.6e-46 188.7 120 74.2
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 4.4e-46 188.0 116 74.1
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 7.5e-46 187.2 116 74.1
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 6.5e-42 174.1 130 67.7
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 5.5e-41 171.0 90 82.2
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 5.5e-41 171.0 87 86.2
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 2.1e-40 169.1 119 64.7
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 3.6e-40 168.3 91 83.5
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 4.7e-40 167.9 117 67.5
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 4.7e-40 167.9 90 84.4
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 6.1e-40 167.5 87 85.1
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 8.0e-40 167.2 90 83.3
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 1.0e-39 166.8 90 82.2
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 3.0e-39 165.2 91 83.5
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 2.6e-38 162.2 87 82.8
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 5.7e-38 161.0 99 73.7
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 1.3e-37 159.8 87 83.9
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 2.2e-37 159.1 115 62.6
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 6.3e-37 157.5 86 82.6
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 6.3e-37 157.5 86 82.6
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 1.1e-36 156.8 86 80.2
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 9.2e-36 153.7 76 88.2
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 2.7e-35 152.1 86 80.2
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 4.5e-35 151.4 86 79.1
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 2.3e-34 149.1 115 61.7
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 2.3e-34 149.1 115 61.7
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 2.9e-34 148.7 87 72.4
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 2.9e-34 148.7 86 77.9
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 1.5e-33 146.4 101 71.3
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 2.5e-33 145.6 100 69.0
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 9.5e-33 143.7 103 67.0
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 1.6e-32 142.9 84 76.2
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 3.6e-32 141.7 72 87.5
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 6.1e-32 141.0 89 73.0
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 1.7e-29 132.9 97 67.0
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 6.6e-26 120.9 67 76.1
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 4.7e-24 114.8 65 78.5
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 2.0e-19 99.4 54 81.5
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 9.5e-17 90.5 119 46.2
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 3.1e-15 85.5 115 40.0
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 5.2e-15 84.7 110 40.9
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 3.4e-14 82.0 117 36.8
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 4.9e-13 78.2 146 33.6
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 1.9e-09 66.2 33 90.9
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 1.9e-09 66.2 30 90.0
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 1.2e-08 63.5 31 90.3
unitig_75.g29315 Utricularia gibba HOM05D006449 ORTHO05D007995 9.9e-06 53.9 25 92.0


User provided reference genes

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