Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 6.4e-74 280.8 156 100.0
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.2e-72 276.6 156 97.4
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 1.4e-68 263.1 156 94.2
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 2.4e-68 262.3 156 93.6
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 1.5e-67 259.6 156 92.3
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 5.8e-67 257.7 157 92.4
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 2.9e-66 255.4 155 93.5
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 1.5e-59 233.0 152 85.5
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 9.9e-59 230.3 156 84.0
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.7e-58 229.6 152 86.2
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 3.8e-58 228.4 153 83.7
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 6.4e-58 227.6 153 81.7
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 6.4e-58 227.6 151 85.4
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 3.2e-57 225.3 151 81.5
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 3.2e-57 225.3 150 86.7
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 9.3e-57 223.8 152 81.6
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 1.2e-56 223.4 150 84.7
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 1.6e-56 223.0 151 84.1
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 1.6e-56 223.0 152 82.9
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 1.6e-56 223.0 151 81.5
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 2.7e-56 222.2 152 81.6
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 7.9e-56 220.7 146 84.9
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 7.9e-56 220.7 152 81.6
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 7.9e-56 220.7 152 82.2
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 1.0e-55 220.3 151 80.8
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 2.3e-55 219.2 152 82.2
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 3.0e-55 218.8 153 80.4
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 3.0e-55 218.8 153 80.4
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 3.0e-55 218.8 150 82.0
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 3.0e-55 218.8 151 82.1
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 3.0e-55 218.8 148 81.1
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.1e-55 218.0 152 80.3
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 5.1e-55 218.0 154 79.2
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 5.1e-55 218.0 154 79.2
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 1.1e-54 216.9 148 79.1
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 1.1e-54 216.9 152 80.9
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 1.5e-54 216.5 151 80.8
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.5e-54 216.5 151 80.8
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 1.9e-54 216.1 152 78.3
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 1.9e-54 216.1 171 74.9
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 2.5e-54 215.7 148 79.1
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 5.6e-54 214.5 153 79.1
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 9.6e-54 213.8 151 79.5
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 9.6e-54 213.8 151 79.5
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 1.3e-53 213.4 148 79.1
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.1e-53 212.6 147 81.6
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 2.8e-53 212.2 147 78.9
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 2.8e-53 212.2 148 79.1
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 8.1e-53 210.7 153 80.4
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 1.1e-52 210.3 146 79.5
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 1.1e-52 210.3 131 87.8
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 1.1e-52 210.3 153 77.1
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.4e-52 209.9 152 78.3
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 4.0e-52 208.4 148 77.7
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 4.0e-52 208.4 148 77.0
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 4.0e-52 208.4 148 77.7
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 4.0e-52 208.4 148 77.7
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 4.0e-52 208.4 148 77.7
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 5.3e-52 208.0 145 80.0
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 5.3e-52 208.0 148 77.7
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 6.9e-52 207.6 148 77.0
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 1.2e-51 206.8 148 77.0
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 1.2e-51 206.8 153 77.1
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 2.0e-51 206.1 151 76.8
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 2.0e-51 206.1 148 76.4
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 2.6e-51 205.7 148 76.4
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 2.6e-51 205.7 148 76.4
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 4.5e-51 204.9 148 76.4
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 4.5e-51 204.9 146 76.7
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 4.5e-51 204.9 148 77.7
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 5.8e-51 204.5 148 77.0
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 1.3e-50 203.4 148 75.7
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.7e-50 203.0 148 75.7
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 2.2e-50 202.6 139 79.9
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 6.4e-50 201.1 152 76.3
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 1.1e-49 200.3 142 78.2
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 1.1e-49 200.3 142 78.2
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 1.4e-49 199.9 148 75.0
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 1.9e-49 199.5 154 73.4
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 3.2e-49 198.7 154 75.3
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 3.2e-49 198.7 151 74.2
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 2.1e-48 196.1 154 72.7
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 1.3e-47 193.4 151 72.2
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 2.3e-47 192.6 146 71.2
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 2.3e-47 192.6 138 76.1
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 3.9e-47 191.8 147 70.1
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 1.5e-46 189.9 150 70.7
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 3.7e-45 185.3 148 73.0
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 1.4e-44 183.3 153 71.2
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 4.0e-44 181.8 144 70.8
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 1.2e-43 180.3 153 73.2
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 1.3e-42 176.8 224 53.1
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 6.5e-42 174.5 156 67.9
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 1.9e-41 172.9 148 66.9
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 4.2e-41 171.8 153 66.7
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 4.6e-40 168.3 147 70.7
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 1.3e-39 166.8 151 65.6
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 1.5e-38 163.3 111 83.8
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 9.7e-38 160.6 112 82.1
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.6e-37 159.8 143 64.3
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 8.2e-37 157.5 127 74.0
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 1.4e-36 156.8 111 82.9
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 4.1e-36 155.2 148 56.8
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 6.9e-36 154.5 153 62.7
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 9.0e-36 154.1 143 58.0
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 3.4e-35 152.1 153 62.7
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 5.0e-34 148.3 148 60.8
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 1.4e-33 146.7 116 70.7
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 1.2e-32 143.7 113 72.6
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 1.2e-32 143.7 173 56.1
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 2.3e-31 139.4 118 67.8
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 3.0e-31 139.0 110 71.8
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 3.9e-31 138.7 153 58.8
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 6.7e-31 137.9 155 57.4
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 2.0e-30 136.3 104 72.1
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 5.7e-30 134.8 145 48.3
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 3.1e-28 129.0 153 55.6
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 3.1e-28 129.0 153 55.6
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 3.1e-28 129.0 152 55.9
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 6.5e-26 121.3 91 74.7
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 3.3e-22 109.0 126 57.1
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 4.4e-22 108.6 81 76.5
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 1.4e-15 87.0 139 42.4
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 3.9e-15 85.5 65 70.8
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 1.2e-11 73.9 158 34.2
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 3.5e-11 72.4 127 44.1
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 5.9e-11 71.6 47 76.6
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 6.5e-10 68.2 54 64.8
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 8.0e-08 61.2 42 73.8
Oeu011770.1 Olea europaea HOM05D004115 ORTHO05D005004 2.6e-06 56.2 42 66.7


User provided reference genes

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