Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003852g0060 Nicotiana tabacum HOM05D007802 ORTHO05D009879 3.3e-37 157.9 82 100.0
Nitab4.5_0001601g0070 Nicotiana tabacum HOM05D007802 ORTHO05D009879 4.0e-35 151.0 82 96.3
Solyc08g016415.1 Solanum lycopersicum HOM05D007802 ORTHO05D009879 2.2e-17 92.0 70 68.6
Sopen08g006790 Solanum pennellii HOM05D007802 ORTHO05D009879 2.9e-17 91.7 70 67.1
FvH4_5g34160 Fragaria vesca HOM05D007802 ORTHO05D009879 1.0e-14 83.2 76 57.9
Dinv42589 Davidia involucrata HOM05D007802 ORTHO05D009879 1.5e-13 79.3 92 51.1
Cc10_g08360 Coffea canephora HOM05D007802 ORTHO05D009879 4.3e-13 77.8 93 51.6
Prupe.1G536500 Prunus persica HOM05D007802 ORTHO05D009879 9.6e-13 76.6 75 54.7
TWI56G1155 Tripterygium wilfordii HOM05D007802 ORTHO05D009879 1.3e-12 76.3 68 57.4
MD08G1204900 Malus domestica HOM05D007802 ORTHO05D009879 2.8e-12 75.1 68 58.8
RcHm_v2.0_Chr7g0233751 Rosa chinensis HOM05D007802 ORTHO05D009879 4.8e-12 74.3 78 51.3
Cpa.g.sc21.44 Carica papaya HOM05D007802 ORTHO05D009879 6.2e-12 73.9 74 54.1
GSVIVG01009214001 Vitis vinifera HOM05D007802 ORTHO05D009879 8.2e-12 73.6 86 51.2
QL09p018673 Quercus lobata HOM05D007802 ORTHO05D009879 1.4e-11 72.8 93 46.2
TAR628G0546 Trochodendron aralioides HOM05D007802 ORTHO05D009879 1.8e-11 72.4 66 59.1
Cfa013816 Carpinus fangiana HOM05D007802 ORTHO05D009879 2.4e-11 72.0 68 55.9
Ciclev10002961m.g Citrus clementina HOM05D007802 ORTHO05D009879 3.1e-11 71.6 76 53.9
CiPaw.08G057300 Carya illinoinensis HOM05D007802 ORTHO05D009879 9.0e-11 70.1 71 53.5
arahy.Tifrunner.gnm1.ann1.6VNW8E Arachis hypogaea HOM05D007802 ORTHO05D009879 1.2e-10 69.7 94 42.6
Eucgr.F00437 Eucalyptus grandis HOM05D007802 ORTHO05D009879 1.2e-10 69.7 88 45.5
FvH4_4g29130 Fragaria vesca HOM05D007802 ORTHO05D009879 1.2e-10 69.7 64 56.2
FAN12G4209 Fragaria x ananassa HOM05D007802 ORTHO05D009879 1.2e-10 69.7 64 56.2
Manes.18G057100 Manihot esculenta HOM05D007802 ORTHO05D009879 1.5e-10 69.3 68 54.4
Atru.chr13.972 Acer truncatum HOM05D007802 ORTHO05D009879 2.0e-10 68.9 68 52.9
ClCG08G011540 Citrullus lanatus HOM05D007802 ORTHO05D009879 2.6e-10 68.6 72 51.4
MD08G1204300 Malus domestica HOM05D007802 ORTHO05D009879 2.6e-10 68.6 65 55.4
AUR62014370 Chenopodium quinoa HOM05D007802 ORTHO05D009879 4.5e-10 67.8 70 52.9
FAN08G3003 Fragaria x ananassa HOM05D007802 ORTHO05D009879 4.5e-10 67.8 105 41.9
FAN18G1081 Fragaria x ananassa HOM05D007802 ORTHO05D009879 4.5e-10 67.8 105 41.9
Glyma.02G216200 Glycine max HOM05D007802 ORTHO05D009879 4.5e-10 67.8 70 52.9
Rhsim07G0213800 Rhododendron simsii HOM05D007802 ORTHO05D009879 4.5e-10 67.8 70 54.3
Haze_22490 Corylus avellana HOM05D007802 ORTHO05D009879 5.8e-10 67.4 68 51.5
Oeu040885.1 Olea europaea HOM05D007802 ORTHO05D009879 7.6e-10 67.0 66 56.1
THA.LOC104806901 Tarenaya hassleriana HOM05D007802 ORTHO05D009879 7.6e-10 67.0 74 44.6
Lalb_Chr17g0344631 Lupinus albus HOM05D007802 ORTHO05D009879 1.0e-09 66.6 70 52.9
AUR62019113 Chenopodium quinoa HOM05D007802 ORTHO05D009879 1.7e-09 65.9 70 51.4
SEGI_04889 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 1.7e-09 65.9 77 42.9
SEGI_40405 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 2.2e-09 65.5 78 43.6
Nn5g29812 Nelumbo nucifera HOM05D007802 ORTHO05D009879 3.8e-09 64.7 65 50.8
AT2G38465 Arabidopsis thaliana HOM05D007802 ORTHO05D009879 5.0e-09 64.3 85 43.5
Thhalv10017501m.g Eutrema salsugineum HOM05D007802 ORTHO05D009879 6.5e-09 63.9 63 52.4
Sed0007651 Sechium edule HOM05D007802 ORTHO05D009879 6.5e-09 63.9 63 52.4
AL4G35740 Arabidopsis lyrata HOM05D007802 ORTHO05D009879 8.4e-09 63.5 81 44.4
CARHR133150 Cardamine hirsuta HOM05D007802 ORTHO05D009879 8.4e-09 63.5 63 54.0
Phvul.008G183400 Phaseolus vulgaris HOM05D007802 ORTHO05D009879 1.4e-08 62.8 87 46.0
TPR.G38823 Trifolium pratense HOM05D007802 ORTHO05D009879 1.4e-08 62.8 67 49.3
ATR0767G120 Amborella trichopoda HOM05D007802 ORTHO05D009879 3.2e-08 61.6 60 53.3
COL.COLO4_35287 Corchorus olitorius HOM05D007802 ORTHO05D009879 3.2e-08 61.6 67 47.8
C07p40270 Brassica napus HOM05D007802 ORTHO05D009879 4.2e-08 61.2 63 52.4
Carub.0004s2044 Capsella rubella HOM05D007802 ORTHO05D009879 4.2e-08 61.2 63 52.4
Thecc.08G074100 Theobroma cacao HOM05D007802 ORTHO05D009879 4.2e-08 61.2 68 48.5
BolC7t44562H Brassica oleracea HOM05D007802 ORTHO05D009879 5.5e-08 60.8 63 52.4
CSS0046125 Camellia sinensis var. sinensis HOM05D007802 ORTHO05D009879 5.5e-08 60.8 69 50.7
Ca_05474_v3 Cicer arietinum L. HOM05D007802 ORTHO05D009879 5.5e-08 60.8 88 42.0
C04p09060 Brassica napus HOM05D007802 ORTHO05D009879 7.1e-08 60.5 63 50.8
A04p29410 Brassica napus HOM05D007802 ORTHO05D009879 9.3e-08 60.1 51 58.8
MELO3C011071.2 Cucumis melo HOM05D007802 ORTHO05D009879 9.3e-08 60.1 58 55.2
SalBow7G0598 Salvia bowleyana HOM05D007802 ORTHO05D009879 1.2e-07 59.7 74 50.0
BcaB02g09173 Brassica carinata HOM05D007802 ORTHO05D009879 2.1e-07 58.9 51 58.8
BcaC02g11998 Brassica carinata HOM05D007802 ORTHO05D009879 2.1e-07 58.9 63 49.2
A05p07580 Brassica napus HOM05D007802 ORTHO05D009879 2.1e-07 58.9 51 58.8
BolC4t22496H Brassica oleracea HOM05D007802 ORTHO05D009879 2.1e-07 58.9 63 49.2
BraA05t19725Z Brassica rapa HOM05D007802 ORTHO05D009879 2.1e-07 58.9 63 49.2
Medtr5g066760 Medicago truncatula HOM05D007802 ORTHO05D009879 2.1e-07 58.9 60 50.0
Sabra02G0086800 Salix brachista HOM05D007802 ORTHO05D009879 2.1e-07 58.9 68 47.1
Psat2g064360 Pisum sativum HOM05D007802 ORTHO05D009879 2.7e-07 58.5 60 50.0
BcaNung02098 Brassica carinata HOM05D007802 ORTHO05D009879 3.5e-07 58.2 63 50.8
DCAR_019323 Daucus carota HOM05D007802 ORTHO05D009879 3.5e-07 58.2 69 44.9
Gorai.009G227900 Gossypium raimondii HOM05D007802 ORTHO05D009879 7.9e-07 57.0 78 44.9
PGR042G2061 Punica granatum HOM05D007802 ORTHO05D009879 7.9e-07 57.0 78 43.6
Gohir.D05G220800 Gossypium hirsutum HOM05D007802 ORTHO05D009879 1.0e-06 56.6 78 44.9
MBI16_g07278_MAGBIO Magnolia biondii HOM05D007802 ORTHO05D009879 1.0e-06 56.6 66 50.0
BcaB06g29053 Brassica carinata HOM05D007802 ORTHO05D009879 1.3e-06 56.2 63 44.4
FAN07G2104 Fragaria x ananassa HOM05D007802 ORTHO05D009879 3.0e-06 55.1 59 47.5
CANSAT78G0113 Cannabis sativa HOM05D007802 ORTHO05D009879 5.1e-06 54.3 66 45.5
HPP92_025782 Vanilla planifolia HOM05D007802 ORTHO05D009879 5.1e-06 54.3 70 42.9


User provided reference genes

Program Settings