Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003844g0030 Nicotiana tabacum HOM05D005736 ORTHO05D007215 7.3e-178 627.1 311 100.0
PGSC0003DMG400024712 Solanum tuberosum HOM05D005736 ORTHO05D007215 1.4e-168 596.3 311 93.2
Sopen01g043240 Solanum pennellii HOM05D005736 ORTHO05D007215 5.8e-167 590.9 311 92.6
Peaxi162Scf00037g01216 Petunia axillaris HOM05D005736 ORTHO05D007215 3.7e-166 588.2 304 93.8
Solyc09g065950.3 Solanum lycopersicum HOM05D005736 ORTHO05D007215 4.9e-166 587.8 311 92.0
CAN.G1459.12 Capsicum annuum HOM05D005736 ORTHO05D007215 1.1e-165 586.6 312 91.7
SGA_v2.0_scaffold196G40952 Striga asiatica HOM05D005736 ORTHO05D007215 1.1e-144 516.9 299 79.9
Cc02_g34150 Coffea canephora HOM05D005736 ORTHO05D007215 2.4e-144 515.8 309 79.9
Hma1.2p1_1292F.1_g273760 Hydrangea macrophylla HOM05D005736 ORTHO05D007215 3.1e-144 515.4 311 78.8
DCAR_003356 Daucus carota HOM05D005736 ORTHO05D007215 2.0e-143 512.7 302 79.8
GSVIVG01031141001 Vitis vinifera HOM05D005736 ORTHO05D007215 5.8e-143 511.1 297 79.8
CSS0016231 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 1.3e-142 510.0 307 78.2
Duzib106G0969 Durio zibethinus HOM05D005736 ORTHO05D007215 1.3e-142 510.0 302 78.5
Thecc.05G313100 Theobroma cacao HOM05D005736 ORTHO05D007215 1.3e-142 510.0 302 79.1
Migut.O00559 Erythranthe guttata HOM05D005736 ORTHO05D007215 2.2e-142 509.2 302 78.1
CSS0007199 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 8.4e-142 507.3 307 77.9
Migut.N02084 Erythranthe guttata HOM05D005736 ORTHO05D007215 1.4e-141 506.5 302 78.1
Oeu043344.1 Olea europaea HOM05D005736 ORTHO05D007215 1.9e-141 506.1 299 79.3
Hund07098 Selenicereus undatus HOM05D005736 ORTHO05D007215 7.1e-141 504.2 307 76.5
COL.COLO4_10521 Corchorus olitorius HOM05D005736 ORTHO05D007215 2.1e-140 502.7 302 77.5
CANSAT54G0716 Cannabis sativa HOM05D005736 ORTHO05D007215 3.5e-140 501.9 300 78.0
Lsat_1_v5_gn_7_69261 Lactuca sativa HOM05D005736 ORTHO05D007215 4.6e-140 501.5 310 75.2
PGR031G0613 Punica granatum HOM05D005736 ORTHO05D007215 1.0e-139 500.4 310 75.2
TAR633G1366 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.3e-139 500.0 307 76.9
AUR62005207 Chenopodium quinoa HOM05D005736 ORTHO05D007215 1.7e-139 499.6 302 77.5
EL10Ac4g09914 Beta vulgaris HOM05D005736 ORTHO05D007215 3.9e-139 498.4 311 76.2
Potri.013G017000 Populus trichocarpa HOM05D005736 ORTHO05D007215 8.7e-139 497.3 302 76.2
CiPaw.07G021500 Carya illinoinensis HOM05D005736 ORTHO05D007215 1.1e-138 496.9 300 78.0
Medtr7g112700 Medicago truncatula HOM05D005736 ORTHO05D007215 1.5e-138 496.5 311 75.9
Aqoxy5G00736 Aquilegia oxysepala HOM05D005736 ORTHO05D007215 2.5e-138 495.7 309 75.1
Glyma.19G233300 Glycine max HOM05D005736 ORTHO05D007215 2.5e-138 495.7 311 76.2
HanXRQChr16g0513361 Helianthus annuus HOM05D005736 ORTHO05D007215 2.5e-138 495.7 311 74.9
MD12G1212900 Malus domestica HOM05D005736 ORTHO05D007215 3.3e-138 495.4 302 76.8
QL03p020205 Quercus lobata HOM05D005736 ORTHO05D007215 3.3e-138 495.4 299 77.3
Sc09g0002940 Simmondsia chinensis HOM05D005736 ORTHO05D007215 3.3e-138 495.4 305 77.7
Haze_04138 Corylus avellana HOM05D005736 ORTHO05D007215 4.3e-138 495.0 300 76.0
Lalb_Chr15g0077351 Lupinus albus HOM05D005736 ORTHO05D007215 4.3e-138 495.0 307 76.2
Glyma.03G235500 Glycine max HOM05D005736 ORTHO05D007215 9.6e-138 493.8 311 75.6
TWI36G0679 Tripterygium wilfordii HOM05D005736 ORTHO05D007215 1.6e-137 493.0 303 74.9
Nn3g21454 Nelumbo nucifera HOM05D005736 ORTHO05D007215 3.6e-137 491.9 307 74.9
ClCG02G015270 Citrullus lanatus HOM05D005736 ORTHO05D007215 6.2e-137 491.1 302 74.2
Gorai.007G300100 Gossypium raimondii HOM05D005736 ORTHO05D007215 6.2e-137 491.1 302 75.8
Potri.005G025300 Populus trichocarpa HOM05D005736 ORTHO05D007215 6.2e-137 491.1 302 74.8
MSTRG.20415 Avicennia marina HOM05D005736 ORTHO05D007215 8.1e-137 490.7 302 75.8
Sabra13G0020000 Salix brachista HOM05D005736 ORTHO05D007215 8.1e-137 490.7 302 75.5
arahy.Tifrunner.gnm1.ann1.7HV2PX Arachis hypogaea HOM05D005736 ORTHO05D007215 1.1e-136 490.3 299 75.9
HanXRQChr10g0296691 Helianthus annuus HOM05D005736 ORTHO05D007215 1.1e-136 490.3 305 75.4
Gohir.D11G277900 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.4e-136 490.0 302 75.8
Lj1g0012360 Lotus japonicus HOM05D005736 ORTHO05D007215 1.4e-136 490.0 311 74.3
Prupe.6G320500 Prunus persica HOM05D005736 ORTHO05D007215 1.4e-136 490.0 302 76.8
Atru.chr2.31 Acer truncatum HOM05D005736 ORTHO05D007215 3.1e-136 488.8 303 75.6
Manes.09G170200 Manihot esculenta HOM05D005736 ORTHO05D007215 3.1e-136 488.8 300 76.0
Sabra13G0015800 Salix brachista HOM05D005736 ORTHO05D007215 3.1e-136 488.8 302 75.2
TAR362G0909 Trochodendron aralioides HOM05D005736 ORTHO05D007215 4.0e-136 488.4 302 75.8
Phvul.006G089500 Phaseolus vulgaris HOM05D005736 ORTHO05D007215 9.0e-136 487.3 311 74.3
ECA234G1428 Erigeron canadensis HOM05D005736 ORTHO05D007215 1.2e-135 486.9 298 75.5
Ah.06g189800 Amaranthus hybridus HOM05D005736 ORTHO05D007215 1.5e-135 486.5 306 75.2
arahy.Tifrunner.gnm1.ann1.B5Q7D5 Arachis hypogaea HOM05D005736 ORTHO05D007215 1.5e-135 486.5 300 75.7
Ciclev10001982m.g Citrus clementina HOM05D005736 ORTHO05D007215 1.5e-135 486.5 303 75.9
MD04G1200300 Malus domestica HOM05D005736 ORTHO05D007215 2.6e-135 485.7 304 75.7
TPR.G33191 Trifolium pratense HOM05D005736 ORTHO05D007215 7.6e-135 484.2 310 74.2
Gohir.A11G268000 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.3e-134 483.4 302 75.2
RcHm_v2.0_Chr3g0455751 Rosa chinensis HOM05D005736 ORTHO05D007215 1.3e-134 483.4 302 74.5
CsaV3_2G006740 Cucumis sativus L. HOM05D005736 ORTHO05D007215 2.2e-134 482.6 302 73.2
Rhsim07G0188500 Rhododendron simsii HOM05D002832 ORTHO05D008667 4.9e-134 481.5 381 63.5
Sed0015517 Sechium edule HOM05D005736 ORTHO05D007215 4.9e-134 481.5 301 72.1
PSO210G0197 Papaver somniferum HOM05D005736 ORTHO05D007215 1.1e-133 480.3 299 73.6
PSO832G2303 Papaver somniferum HOM05D005736 ORTHO05D007215 1.9e-133 479.6 299 73.6
VMungo0540G0827 Vigna mungo HOM05D005736 ORTHO05D007215 3.2e-133 478.8 311 73.3
Gohir.A11G294600 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.2e-132 476.9 302 73.5
FvH4_6g06571 Fragaria vesca HOM05D005736 ORTHO05D007215 6.0e-132 474.6 302 73.5
Aa31LG5G15870 Aethionema arabicum HOM05D005736 ORTHO05D007215 2.3e-131 472.6 311 70.4
THA.LOC104818718 Tarenaya hassleriana HOM05D005736 ORTHO05D007215 3.0e-131 472.2 309 70.6
AL3G16120 Arabidopsis lyrata HOM05D005736 ORTHO05D007215 3.9e-131 471.9 310 70.6
vmacro04813 Vaccinium macrocarpon HOM05D005736 ORTHO05D007215 3.9e-131 471.9 381 63.0
Cfa006630 Carpinus fangiana HOM05D005736 ORTHO05D007215 8.7e-131 470.7 300 73.0
CARHR079910 Cardamine hirsuta HOM05D005736 ORTHO05D007215 5.6e-130 468.0 309 70.6
ATR0796G081 Amborella trichopoda HOM05D005736 ORTHO05D007215 1.3e-129 466.8 311 69.8
Carub.0003s0481 Capsella rubella HOM05D005736 ORTHO05D007215 1.6e-129 466.5 310 69.4
Thhalv10021069m.g Eutrema salsugineum HOM05D005736 ORTHO05D007215 2.8e-129 465.7 315 69.8
Sp3g04350 Schrenkiella parvula HOM05D005736 ORTHO05D007215 3.7e-129 465.3 310 69.7
AT3G05520 Arabidopsis thaliana HOM05D005736 ORTHO05D007215 1.1e-128 463.8 309 69.9
BraA03t12591Z Brassica rapa HOM05D005736 ORTHO05D007215 1.1e-128 463.8 309 68.9
BcaB04g19260 Brassica carinata HOM05D005736 ORTHO05D007215 1.8e-128 463.0 310 69.7
BcaB04g19261 Brassica carinata HOM05D005736 ORTHO05D007215 5.3e-128 461.5 310 69.0
BNapus_Darmor_BZH_scaffold_114p00020 Brassica napus HOM05D005736 ORTHO05D007215 5.3e-128 461.5 308 69.2
BraSC132t45500Z Brassica rapa HOM05D005736 ORTHO05D007215 6.9e-128 461.1 308 69.2
FAN09G2204 Fragaria x ananassa HOM05D001134 ORTHO05D007215 6.9e-128 461.1 301 72.8
BolC3t16437H Brassica oleracea HOM05D005736 ORTHO05D007215 9.0e-128 460.7 309 68.6
Gorai.007G341300 Gossypium raimondii HOM05D005736 ORTHO05D007215 1.5e-127 459.9 326 68.1
FAN05G2751 Fragaria x ananassa HOM05D001134 ORTHO05D007215 2.0e-127 459.5 301 72.4
HPP92_002147 Vanilla planifolia HOM05D005736 ORTHO05D007215 1.0e-126 457.2 311 68.2
A03p34170 Brassica napus HOM05D005736 ORTHO05D007215 2.2e-126 456.1 308 68.2
C03p41560 Brassica napus HOM05D005736 ORTHO05D007215 3.8e-126 455.3 308 68.5
Dinv30811 Davidia involucrata HOM05D005736 ORTHO05D007215 4.2e-125 451.8 307 72.0
FAN02G0934 Fragaria x ananassa HOM05D005736 ORTHO05D007215 4.2e-125 451.8 338 65.4
CDE02G3291 Ceratophyllum demersum HOM05D005736 ORTHO05D007215 1.6e-124 449.9 306 69.6
FAN14G1274 Fragaria x ananassa HOM05D001134 ORTHO05D001035 1.1e-122 443.7 311 69.1
BolC1t05691H Brassica oleracea HOM05D005736 ORTHO05D007215 3.1e-120 435.6 315 65.4
Zm00001eb330450 Zea mays HOM05D005736 ORTHO05D007215 5.3e-120 434.9 297 66.0
MELO3C004216.2 Cucumis melo HOM05D005736 ORTHO05D007215 2.2e-118 429.5 302 67.5
Zm00001eb111300 Zea mays HOM05D005736 ORTHO05D007215 1.2e-116 423.7 297 65.3
AUR62000762 Chenopodium quinoa HOM05D005736 ORTHO05D007215 1.6e-113 413.3 262 73.7
Cpa.g.sc48.100 Carica papaya HOM05D005736 ORTHO05D007215 2.2e-113 412.9 311 65.6
Eucgr.H04534 Eucalyptus grandis HOM05D005736 ORTHO05D007215 1.4e-112 410.2 271 70.1
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 3.1e-112 409.1 265 70.9
Psat3g011440 Pisum sativum HOM05D005736 ORTHO05D007215 2.5e-109 399.4 263 70.7
Gohir.D11G309300 Gossypium hirsutum HOM05D005736 ORTHO05D007215 8.2e-105 384.4 238 74.8
unitig_46.g18363 Utricularia gibba HOM05D005736 ORTHO05D007215 1.4e-99 367.1 299 58.9
Mapoly0002s0253 Marchantia polymorpha HOM05D005736 ORTHO05D007215 3.9e-99 365.5 306 55.6
Nitab4.5_0018629g0010 Nicotiana tabacum HOM05D005736 ORTHO05D007215 3.9e-99 365.5 177 98.9
Actinidia35560 Actinidia chinensis HOM05D002832 ORTHO05D008667 4.8e-97 358.6 271 67.9
Sopen09g027740 Solanum pennellii HOM05D005736 ORTHO05D007215 5.3e-96 355.1 177 95.5
SMO196G0013 Selaginella moellendorffii HOM05D005736 ORTHO05D007215 5.9e-95 351.7 291 58.4
unitig_48.g30289 Utricularia gibba HOM05D005736 ORTHO05D007215 7.2e-93 344.7 299 57.5
Os07g0414800 Oryza sativa ssp. japonica HOM05D005736 ORTHO05D007215 6.7e-91 338.2 216 69.4
RcHm_v2.0_Chr1g0327431 Rosa chinensis HOM05D005736 ORTHO05D007215 1.1e-90 337.4 200 78.0
AagrBONN_evm.TU.Sc2ySwM_344.5036 Anthoceros agrestis HOM05D005736 ORTHO05D007215 9.7e-90 334.3 301 53.5
BcaC09g47830 Brassica carinata HOM05D005736 ORTHO05D007215 2.4e-80 303.1 211 65.9
Lj5A420T26 Lonicera japonica HOM05D005736 ORTHO05D007215 7.5e-74 281.6 178 77.0
Pp3c10_25170 Physcomitrium patens HOM05D005736 ORTHO05D007215 2.7e-71 273.1 237 53.2
RcHm_v2.0_Chr1g0322221 Rosa chinensis HOM05D005736 ORTHO05D007215 4.0e-67 259.2 181 69.6
RcHm_v2.0_Chr3g0465741 Rosa chinensis HOM05D005736 ORTHO05D007215 7.3e-61 238.4 142 75.4
Pp3c20_23130 Physcomitrium patens HOM05D005736 ORTHO05D007215 1.9e-56 223.8 189 57.1
Nitab4.5_0003658g0100 Nicotiana tabacum HOM05D001134 ORTHO05D001035 3.9e-54 216.1 111 98.2
MBI18_g08112_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 1.3e-49 201.1 130 70.0
BcaB05g23235 Brassica carinata HOM05D005736 ORTHO05D007215 8.3e-49 198.4 171 53.8
Actinidia16814 Actinidia chinensis HOM05D005736 ORTHO05D007215 1.3e-46 191.0 107 85.0
Actinidia16813 Actinidia chinensis HOM05D005736 ORTHO05D007215 6.6e-46 188.7 132 68.2
BcaB04g21446 Brassica carinata HOM05D005736 ORTHO05D007215 1.2e-44 184.5 131 68.7
RcHm_v2.0_Chr1g0322051 Rosa chinensis HOM05D005736 ORTHO05D007215 3.4e-42 176.4 123 67.5
MBI18_g44147_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 9.2e-40 168.3 145 57.2
TAR636G3309 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.1e-32 144.8 101 65.3
TAR629G2822 Trochodendron aralioides HOM05D005736 ORTHO05D007215 2.4e-32 143.7 101 67.3
RcHm_v2.0_Chr1g0322151 Rosa chinensis HOM05D005736 ORTHO05D007215 9.3e-32 141.7 101 65.3
unitig_48.g30291 Utricularia gibba HOM05D003281 ORTHO05D004128 8.7e-22 108.6 74 66.2
MBI18_g08111_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 1.7e-17 94.4 52 76.9
EL10Ac9g22444 Beta vulgaris HOM05D005736 ORTHO05D090219 8.7e-06 55.5 39 64.1


User provided reference genes

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