Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 3.5e-178 628.2 330 100.0
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 6.3e-172 607.4 330 96.1
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 2.7e-154 548.9 330 83.0
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 1.2e-146 523.5 330 85.8
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 2.8e-143 512.3 330 81.8
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.4e-142 510.0 330 81.8
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 8.3e-140 500.7 289 85.8
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 2.0e-125 453.0 278 76.6
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 1.7e-121 439.9 317 68.1
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 2.3e-121 439.5 298 71.1
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 5.1e-121 438.3 309 68.6
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 8.7e-121 437.6 298 71.1
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 1.9e-120 436.4 291 72.5
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.1e-118 430.6 293 71.7
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 1.4e-118 430.3 300 69.3
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 4.0e-118 428.7 284 70.8
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 4.0e-118 428.7 284 74.3
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 3.4e-117 425.6 312 68.6
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 4.4e-117 425.2 302 66.6
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 4.4e-117 425.2 285 71.2
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 5.8e-117 424.9 299 68.6
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 5.8e-117 424.9 307 66.1
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 9.9e-117 424.1 298 68.1
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 1.3e-116 423.7 291 70.1
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 1.3e-116 423.7 280 72.1
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 4.9e-116 421.8 291 69.4
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 1.1e-115 420.6 302 68.2
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.1e-115 420.6 298 69.1
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 3.2e-115 419.1 296 69.3
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.2e-114 417.2 301 65.8
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.6e-114 416.8 305 65.9
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 3.5e-114 415.6 300 65.7
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 4.6e-114 415.2 293 68.3
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 7.8e-114 414.5 297 66.7
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 7.8e-114 414.5 293 67.9
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 1.3e-113 413.7 301 67.8
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 3.0e-113 412.5 299 65.9
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 5.1e-113 411.8 294 67.7
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 8.7e-113 411.0 317 65.6
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 1.1e-112 410.6 285 68.4
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 1.5e-112 410.2 285 67.7
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 1.9e-112 409.8 290 68.6
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.9e-112 409.8 298 68.5
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 1.9e-112 409.8 290 69.3
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 3.3e-112 409.1 280 70.4
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 7.3e-112 407.9 307 67.8
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.3e-111 407.1 276 70.3
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 2.8e-111 406.0 302 64.6
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 4.8e-111 405.2 300 64.0
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 4.8e-111 405.2 293 66.6
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 6.2e-111 404.8 302 67.9
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 8.1e-111 404.4 282 67.7
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 1.4e-110 403.7 301 65.1
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 1.4e-110 403.7 287 68.6
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.8e-110 403.3 287 67.6
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 1.8e-110 403.3 301 65.8
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 1.8e-110 403.3 290 66.6
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.4e-110 402.9 297 66.0
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 2.4e-110 402.9 286 67.5
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 9.0e-110 401.0 301 65.1
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 1.5e-109 400.2 326 63.5
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 2.6e-109 399.4 288 67.4
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 2.6e-109 399.4 299 66.2
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 4.5e-109 398.7 284 67.6
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 5.8e-109 398.3 288 67.0
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 7.6e-109 397.9 284 65.8
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 1.3e-108 397.1 299 64.5
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.7e-108 396.7 271 70.8
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 4.9e-108 395.2 288 66.0
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 8.4e-108 394.4 272 69.5
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 1.9e-107 393.3 284 66.5
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 3.2e-107 392.5 288 66.0
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 2.7e-106 389.4 332 61.1
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 6.0e-106 388.3 267 70.4
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 1.3e-105 387.1 307 63.5
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 3.0e-105 386.0 300 65.0
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 3.9e-105 385.6 300 65.0
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 3.9e-105 385.6 288 66.0
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 5.1e-105 385.2 294 62.6
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 8.7e-105 384.4 252 75.0
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.5e-104 383.6 288 65.6
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.5e-104 382.9 292 64.4
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 3.3e-104 382.5 285 66.7
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 4.3e-104 382.1 287 64.8
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 1.5e-101 373.6 305 63.3
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 4.5e-101 372.1 272 66.2
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 4.5e-101 372.1 298 62.8
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 1.3e-100 370.5 275 66.2
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 1.7e-100 370.2 301 63.8
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 8.4e-100 367.9 290 60.3
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 1.4e-99 367.1 302 63.9
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 1.4e-99 367.1 302 63.9
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 1.9e-99 366.7 203 83.3
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 5.5e-99 365.2 251 66.9
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.9e-92 342.8 312 58.3
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 1.4e-91 340.5 234 66.2
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 3.2e-91 339.3 229 83.8
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 5.1e-89 332.0 252 65.1
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 1.9e-88 330.1 321 54.5
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 2.9e-84 316.2 293 54.3
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 2.2e-76 290.0 208 67.3
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 8.8e-73 278.1 300 49.7
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.1e-67 261.2 283 47.0
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 1.9e-67 260.4 213 59.2
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.6e-66 257.3 182 72.0
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 6.1e-66 255.4 176 70.5
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.3e-65 253.4 278 46.8
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 5.2e-65 252.3 304 44.1
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 8.8e-65 251.5 314 41.7
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 4.5e-61 239.2 292 45.9
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 1.7e-52 210.7 216 46.8
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.7e-47 194.1 288 41.0
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 3.8e-44 183.0 294 38.4
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 5.0e-44 182.6 149 56.4
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 2.9e-36 156.8 152 58.6
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 6.4e-31 139.0 106 59.4
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.2e-24 118.2 110 57.3
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 1.8e-17 94.4 119 51.3
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 4.1e-14 83.2 135 38.5
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 9.6e-11 72.0 41 78.0
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 9.9e-08 62.0 95 42.1
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 6.4e-07 59.3 33 75.8


User provided reference genes

Program Settings