Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 9.8e-94 347.1 211 100.0
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 4.1e-84 315.1 211 84.4
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 3.5e-51 205.7 211 57.3
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 1.3e-48 197.2 210 55.7
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 2.9e-45 186.0 206 51.5
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 2.2e-40 169.9 203 50.7
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 5.3e-39 165.2 204 50.0
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 1.2e-38 164.1 223 46.2
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 1.5e-38 163.7 210 51.0
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 2.6e-38 162.9 209 48.3
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 5.9e-38 161.8 198 50.5
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 2.9e-37 159.5 202 49.0
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 5.0e-37 158.7 210 44.8
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 1.1e-36 157.5 210 47.1
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 2.5e-36 156.4 210 45.7
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 4.2e-36 155.6 209 46.9
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 9.4e-36 154.5 209 47.8
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 1.6e-35 153.7 214 46.3
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 2.7e-35 152.9 205 45.4
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 2.3e-34 149.8 198 46.0
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 3.9e-34 149.1 205 46.3
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 8.8e-34 147.9 202 46.5
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 3.3e-33 146.0 210 43.8
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 3.3e-33 146.0 198 46.0
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 2.2e-32 143.3 209 42.6
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 4.8e-32 142.1 122 67.2
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 1.2e-30 137.5 198 44.4
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 2.0e-30 136.7 197 46.2
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 3.4e-30 136.0 231 39.8
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 3.4e-30 136.0 205 44.9
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 4.5e-30 135.6 209 42.1
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 1.0e-29 134.4 211 40.8
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 1.3e-29 134.0 220 41.8
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 2.2e-29 133.3 209 40.7
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 5.5e-28 128.6 209 40.2
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 4.7e-27 125.6 194 43.8
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 7.9e-27 124.8 197 41.1
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 7.9e-27 124.8 209 43.5
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 7.9e-27 124.8 209 43.5
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 1.0e-26 124.4 194 40.7
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 3.0e-26 122.9 213 40.8
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 3.9e-26 122.5 145 52.4
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 6.7e-26 121.7 201 47.8
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 8.8e-26 121.3 198 42.9
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 2.6e-25 119.8 174 50.6
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 9.7e-25 117.9 215 40.9
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.7e-24 117.1 189 44.4
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 3.7e-24 115.9 214 40.7
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 3.7e-24 115.9 200 43.5
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 1.1e-23 114.4 144 45.8
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 3.1e-23 112.8 200 38.0
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 5.3e-23 112.1 161 42.2
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 9.1e-23 111.3 149 41.6
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 1.2e-22 110.9 151 43.0
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 2.6e-22 109.8 204 40.7
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 1.3e-21 107.5 161 41.6
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 1.7e-21 107.1 161 41.6
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 2.2e-21 106.7 160 41.9
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 2.9e-21 106.3 219 36.1
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 5.0e-21 105.5 198 38.4
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 6.5e-21 105.1 198 38.4
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 1.1e-20 104.4 150 42.0
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 1.1e-20 104.4 143 47.6
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 1.5e-20 104.0 151 42.4
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 3.2e-20 102.8 161 39.8
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 5.5e-20 102.1 161 41.0
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 1.2e-19 100.9 144 42.4
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.4e-18 97.4 151 39.1
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 8.8e-18 94.7 196 39.3
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 4.4e-17 92.4 165 37.6
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 5.7e-17 92.0 182 35.7
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 4.8e-16 89.0 93 53.8
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 4.1e-15 85.9 189 33.3
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 4.5e-14 82.4 136 39.0
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 7.7e-14 81.6 94 47.9
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.7e-13 80.5 170 32.9
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 3.8e-13 79.3 153 45.8
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.9e-12 77.0 206 33.0
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 1.9e-12 77.0 128 41.4
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.5e-12 76.6 89 48.3
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 3.2e-12 76.3 203 32.5
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 4.2e-12 75.9 135 36.3
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 5.5e-12 75.5 206 33.0
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.3e-10 70.1 141 38.3
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.8e-10 68.6 136 36.8
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 2.6e-09 66.6 198 30.3
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 4.4e-09 65.9 141 38.3
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 4.8e-08 62.4 119 38.7
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 1.1e-07 61.2 74 44.6
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 1.4e-07 60.8 122 32.8
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.4e-07 60.8 130 37.7
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 3.1e-07 59.7 84 38.1


User provided reference genes

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