Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003834g0010 Nicotiana tabacum HOM05D006195 ORTHO05D007710 2.0e-94 349.0 167 100.0
Nitab4.5_0009994g0040 Nicotiana tabacum HOM05D006195 ORTHO05D007710 6.2e-51 204.5 138 74.6
Peaxi162Scf00355g00914 Petunia axillaris HOM05D006195 ORTHO05D007710 5.8e-49 198.0 133 74.4
Solyc02g079110.3 Solanum lycopersicum HOM05D006195 ORTHO05D007710 7.6e-49 197.6 138 73.2
Sopen02g023920 Solanum pennellii HOM05D006195 ORTHO05D007710 7.6e-49 197.6 138 73.2
PGSC0003DMG400022408 Solanum tuberosum HOM05D006195 ORTHO05D007710 4.9e-48 194.9 138 72.5
Cc02_g12450 Coffea canephora HOM05D006195 ORTHO05D007710 1.0e-40 170.6 87 89.7
Actinidia24060 Actinidia chinensis HOM05D006195 ORTHO05D007710 1.3e-40 170.2 93 84.9
MBI14_g15641_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 2.2e-40 169.5 87 85.1
Sed0022279 Sechium edule HOM05D006195 ORTHO05D007710 2.2e-40 169.5 93 84.9
CsaV3_1G011800 Cucumis sativus L. HOM05D006195 ORTHO05D007710 2.9e-40 169.1 93 84.9
Eucgr.E03701 Eucalyptus grandis HOM05D006195 ORTHO05D007710 5.0e-40 168.3 89 84.3
Lsat_1_v5_gn_7_19641 Lactuca sativa HOM05D006195 ORTHO05D007710 5.0e-40 168.3 93 83.9
QL04p018330 Quercus lobata HOM05D006195 ORTHO05D007710 5.0e-40 168.3 93 83.9
TAR629G3096 Trochodendron aralioides HOM05D006195 ORTHO05D007710 5.0e-40 168.3 93 82.8
MD10G1303200 Malus domestica HOM05D006195 ORTHO05D007710 6.5e-40 167.9 93 82.8
Rhsim02G0120000 Rhododendron simsii HOM05D006195 ORTHO05D007710 1.1e-39 167.2 92 82.6
Cfa000355 Carpinus fangiana HOM05D006195 ORTHO05D007710 1.4e-39 166.8 91 84.6
ClCG03G005530 Citrullus lanatus HOM05D006195 ORTHO05D007710 1.4e-39 166.8 85 88.2
Haze_06571 Corylus avellana HOM05D006195 ORTHO05D007710 1.4e-39 166.8 91 84.6
Gohir.A05G165600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 1.4e-39 166.8 93 80.6
Gorai.009G173800 Gossypium raimondii HOM05D006195 ORTHO05D007710 1.4e-39 166.8 93 80.6
vmacro15867 Vaccinium macrocarpon HOM05D006195 ORTHO05D007710 3.2e-39 165.6 92 81.5
CiPaw.09G158100 Carya illinoinensis HOM05D006195 ORTHO05D007710 4.2e-39 165.2 91 82.4
Gohir.D05G168600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 4.2e-39 165.2 93 79.6
Nitab4.5_0000190g0110 Nicotiana tabacum HOM05D006195 ORTHO05D007710 4.2e-39 165.2 142 60.6
RcHm_v2.0_Chr5g0006371 Rosa chinensis HOM05D006195 ORTHO05D007710 4.2e-39 165.2 93 80.6
MELO3C002557.2 Cucumis melo HOM05D006195 ORTHO05D007710 5.5e-39 164.9 92 81.5
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 5.5e-39 164.9 93 83.9
FvH4_3g04030 Fragaria vesca HOM05D006195 ORTHO05D007710 5.5e-39 164.9 93 80.6
FAN11G1039 Fragaria x ananassa HOM05D006195 ORTHO05D007710 5.5e-39 164.9 93 80.6
FAN25G3765 Fragaria x ananassa HOM05D006195 ORTHO05D007710 5.5e-39 164.9 93 80.6
Lj2A280G38 Lonicera japonica HOM05D006195 ORTHO05D007710 5.5e-39 164.9 93 83.9
Oeu038214.1 Olea europaea HOM05D006195 ORTHO05D007710 5.5e-39 164.9 89 80.9
Cpa.g.sc27.120 Carica papaya HOM05D006195 ORTHO05D007710 9.3e-39 164.1 91 80.2
AUR62014719 Chenopodium quinoa HOM05D006195 ORTHO05D007710 9.3e-39 164.1 93 78.5
Dinv40483 Davidia involucrata HOM05D006195 ORTHO05D007710 9.3e-39 164.1 93 82.8
TWI38G0511 Tripterygium wilfordii HOM05D006195 ORTHO05D007710 9.3e-39 164.1 93 82.8
Ciclev10015313m.g Citrus clementina HOM05D006195 ORTHO05D007710 1.2e-38 163.7 93 79.6
Prupe.4G036600 Prunus persica HOM05D006195 ORTHO05D007710 1.2e-38 163.7 127 65.4
Potri.011G043000 Populus trichocarpa HOM05D006195 ORTHO05D007710 1.6e-38 163.3 87 83.9
Thecc.06G199000 Theobroma cacao HOM05D006195 ORTHO05D007710 1.6e-38 163.3 93 78.5
Atru.chr10.2006 Acer truncatum HOM05D006195 ORTHO05D007710 2.1e-38 162.9 93 82.8
Aqoxy1G02740 Aquilegia oxysepala HOM05D006195 ORTHO05D007710 2.1e-38 162.9 92 84.8
GSVIVG01003194001 Vitis vinifera HOM05D006195 ORTHO05D007710 2.1e-38 162.9 93 79.6
Duzib235G1322 Durio zibethinus HOM05D006195 ORTHO05D007710 2.7e-38 162.5 93 77.4
AUR62016899 Chenopodium quinoa HOM05D006195 ORTHO05D007710 3.6e-38 162.2 85 81.2
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 3.6e-38 162.2 93 80.6
CANSAT56G3748 Cannabis sativa HOM05D006195 ORTHO05D007710 4.6e-38 161.8 131 64.1
THA.LOC104806275 Tarenaya hassleriana HOM05D006195 ORTHO05D007710 4.6e-38 161.8 87 79.3
Ah.14g088920 Amaranthus hybridus HOM05D006195 ORTHO05D007710 6.1e-38 161.4 93 80.6
HanXRQChr14g0437281 Helianthus annuus HOM05D006195 ORTHO05D007710 7.9e-38 161.0 93 80.6
EL10Ac8g20527 Beta vulgaris HOM05D006195 ORTHO05D007710 1.8e-37 159.8 85 81.2
SalBow8G2471 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.8e-37 159.8 89 78.7
PGR042G1193 Punica granatum HOM05D006195 ORTHO05D007710 2.3e-37 159.5 93 77.4
Sc17g0006620 Simmondsia chinensis HOM05D006195 ORTHO05D007710 3.0e-37 159.1 85 81.2
PSO675G1294 Papaver somniferum HOM05D006195 ORTHO05D007710 3.9e-37 158.7 87 79.3
Aa31LG6G3540 Aethionema arabicum HOM05D006195 ORTHO05D007710 5.1e-37 158.3 86 81.4
Thhalv10025271m.g Eutrema salsugineum HOM05D006195 ORTHO05D007710 5.1e-37 158.3 87 80.5
SGA_v2.0_scaffold7G03951 Striga asiatica HOM05D006195 ORTHO05D007710 5.1e-37 158.3 89 78.7
DCAR_008069 Daucus carota HOM05D006195 ORTHO05D007710 6.7e-37 157.9 93 81.7
Eucgr.L01396 Eucalyptus grandis HOM05D006195 ORTHO05D007710 6.7e-37 157.9 89 79.8
AT4G21520 Arabidopsis thaliana HOM05D006195 ORTHO05D007710 8.8e-37 157.5 87 79.3
BcaNung02791 Brassica carinata HOM05D006195 ORTHO05D007710 8.8e-37 157.5 87 79.3
Dinv18994 Davidia involucrata HOM05D006195 ORTHO05D007710 8.8e-37 157.5 87 83.9
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 1.1e-36 157.1 93 77.4
FAN21G3429 Fragaria x ananassa HOM05D006195 ORTHO05D007710 1.1e-36 157.1 102 73.5
ATR0693G097 Amborella trichopoda HOM05D006195 ORTHO05D007710 1.9e-36 156.4 91 73.6
Carub.0007s1990 Capsella rubella HOM05D006195 ORTHO05D007710 2.5e-36 156.0 87 78.2
Sp7g19630 Schrenkiella parvula HOM05D006195 ORTHO05D007710 2.5e-36 156.0 87 79.3
Ca_18483_v3 Cicer arietinum L. HOM05D006195 ORTHO05D007710 3.3e-36 155.6 93 78.5
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 3.3e-36 155.6 93 78.5
BraA01t01227Z Brassica rapa HOM05D006195 ORTHO05D007710 4.3e-36 155.2 87 78.2
Glyma.07G190200 Glycine max HOM05D006195 ORTHO05D007710 4.3e-36 155.2 120 64.2
AL7G32530 Arabidopsis lyrata HOM05D006195 ORTHO05D007710 5.7e-36 154.8 87 78.2
A01p12830 Brassica napus HOM05D006195 ORTHO05D007710 5.7e-36 154.8 87 77.0
Medtr4g091080 Medicago truncatula HOM05D006195 ORTHO05D007710 7.4e-36 154.5 93 77.4
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 7.4e-36 154.5 103 70.9
C01p15450 Brassica napus HOM05D006195 ORTHO05D007710 9.7e-36 154.1 87 78.2
BolC1t01499H Brassica oleracea HOM05D006195 ORTHO05D007710 9.7e-36 154.1 87 78.2
Lj4g0017156 Lotus japonicus HOM05D006195 ORTHO05D007710 9.7e-36 154.1 93 78.5
CARHR228180 Cardamine hirsuta HOM05D006195 ORTHO05D007710 1.7e-35 153.3 87 77.0
Migut.I00196 Erythranthe guttata HOM05D006195 ORTHO05D007710 1.7e-35 153.3 89 75.3
Lalb_Chr09g0327371 Lupinus albus HOM05D006195 ORTHO05D007710 1.7e-35 153.3 93 77.4
MD05G1325300 Malus domestica HOM05D006195 ORTHO05D007710 1.7e-35 153.3 96 76.0
Migut.M01211 Erythranthe guttata HOM05D006195 ORTHO05D007710 2.2e-35 152.9 89 74.2
TPR.G37128 Trifolium pratense HOM05D006195 ORTHO05D007710 2.2e-35 152.9 93 77.4
VMungo0251G2515 Vigna mungo HOM05D006195 ORTHO05D007710 2.8e-35 152.5 85 82.4
Psat7g108560 Pisum sativum HOM05D006195 ORTHO05D007710 3.7e-35 152.1 94 78.7
Phvul.002G222200 Phaseolus vulgaris HOM05D006195 ORTHO05D007710 8.2e-35 151.0 103 69.9
Os03g0738000 Oryza sativa ssp. japonica HOM05D006195 ORTHO05D007710 1.4e-34 150.2 81 80.2
arahy.Tifrunner.gnm1.ann1.HDHM3Z Arachis hypogaea HOM05D006195 ORTHO05D007710 2.4e-34 149.4 93 76.3
arahy.Tifrunner.gnm1.ann1.IWY5CJ Arachis hypogaea HOM05D006195 ORTHO05D007710 2.4e-34 149.4 93 76.3
MSTRG.8639 Avicennia marina HOM05D006195 ORTHO05D007710 3.1e-34 149.1 89 74.2
CSS0049192 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 4.1e-34 148.7 90 75.6
CDE11G0466 Ceratophyllum demersum HOM05D006195 ORTHO05D007710 9.1e-34 147.5 81 79.0
Mapoly0082s0056 Marchantia polymorpha HOM05D006195 ORTHO05D007710 1.5e-33 146.7 93 69.9
Zm00001eb056530 Zea mays HOM05D006195 ORTHO05D007710 1.5e-33 146.7 83 75.9
Pp3c6_22670 Physcomitrium patens HOM05D006195 ORTHO05D007710 3.8e-32 142.1 89 68.5
AagrBONN_evm.TU.Sc2ySwM_344.4192 Anthoceros agrestis HOM05D006195 ORTHO05D007710 3.2e-31 139.0 92 65.2
Manes.17G039200 Manihot esculenta HOM05D006195 ORTHO05D007710 2.1e-30 136.3 87 74.7
SMO137G0351 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 1.4e-29 133.7 124 50.0
HPP92_018057 Vanilla planifolia HOM05D006195 ORTHO05D007710 6.7e-29 131.3 97 63.9
Hund23609 Selenicereus undatus HOM05D006195 ORTHO05D007710 8.2e-27 124.4 64 87.5
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 4.5e-25 118.6 86 62.8
Potri.004G034600 Populus trichocarpa HOM05D006195 ORTHO05D007710 5.0e-24 115.2 66 81.8
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 8.5e-24 114.4 84 63.1
SMO116G0485 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 7.2e-23 111.3 110 46.4
MCO07G204 Micromonas commoda HOM05D006195 ORTHO05D007710 1.1e-18 97.4 80 55.0
Cre07.g326350 Chlamydomonas reinhardtii HOM05D006195 ORTHO05D007710 4.1e-18 95.5 73 56.2
Manes.10G084901 Manihot esculenta HOM05D006195 ORTHO05D007710 7.0e-18 94.7 63 74.6
SEGI_17138 Sequoiadendron giganteum HOM05D006195 ORTHO05D007710 2.9e-16 89.4 50 74.0
MBI14_g13652_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 8.2e-11 71.2 40 75.0
SalBow1G5137 Salvia bowleyana HOM05D006195 ORTHO05D007710 5.3e-10 68.6 36 80.6
SalBow6G2099 Salvia bowleyana HOM05D006195 ORTHO05D007710 5.3e-10 68.6 36 80.6
SalBow6G4337 Salvia bowleyana HOM05D006195 ORTHO05D007710 5.3e-10 68.6 36 80.6
SHI02125 Sapria himalayana HOM05D006195 ORTHO05D007710 2.0e-09 66.6 59 49.2
SHI02124 Sapria himalayana HOM05D006195 ORTHO05D007710 7.2e-07 58.2 29 89.7


User provided reference genes

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