Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003825g0100 Nicotiana tabacum HOM05D002831 ORTHO05D010484 2.2e-34 148.3 69 100.0
Peaxi162Scf00444g00118 Petunia axillaris HOM05D002831 ORTHO05D010484 4.4e-19 97.4 58 79.3
Nitab4.5_0000084g0420 Nicotiana tabacum HOM05D002831 ORTHO05D010484 6.0e-16 87.0 51 82.4
Solyc03g007990.2 Solanum lycopersicum HOM05D002831 ORTHO05D010484 3.0e-15 84.7 51 80.4
CiPaw.06G003400 Carya illinoinensis HOM05D002831 ORTHO05D010484 3.9e-15 84.3 55 74.5
Atru.ctg97_1.17 Acer truncatum HOM05D002831 ORTHO05D010484 8.7e-15 83.2 52 78.8
CiPaw.06G003200 Carya illinoinensis HOM05D002831 ORTHO05D010484 1.1e-14 82.8 52 76.9
Gohir.D11G011200 Gossypium hirsutum HOM05D002831 ORTHO05D010484 2.5e-14 81.6 52 75.0
MD01G1208000 Malus domestica HOM05D002831 ORTHO05D010484 2.5e-14 81.6 52 78.8
Prupe.2G300500 Prunus persica HOM05D002831 ORTHO05D010484 2.5e-14 81.6 52 78.8
Cc02_g02410 Coffea canephora HOM05D002831 ORTHO05D010484 3.3e-14 81.3 51 72.5
Thecc.03G183800 Theobroma cacao HOM05D002831 ORTHO05D010484 3.3e-14 81.3 52 75.0
Nitab4.5_0000248g0010 Nicotiana tabacum HOM05D002831 ORTHO05D004341 4.3e-14 80.9 43 90.7
Nn1g01626 Nelumbo nucifera HOM05D002831 ORTHO05D010484 5.6e-14 80.5 52 78.8
CAN.G126.13 Capsicum annuum HOM05D002831 ORTHO05D010484 9.6e-14 79.7 51 76.5
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 1.3e-13 79.3 52 76.9
Potri.004G080000 Populus trichocarpa HOM05D002831 ORTHO05D010484 1.3e-13 79.3 52 76.9
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 1.6e-13 79.0 52 78.8
Manes.14G022900 Manihot esculenta HOM05D002831 ORTHO05D010484 1.6e-13 79.0 52 75.0
Gohir.A11G012000 Gossypium hirsutum HOM05D002831 ORTHO05D010484 3.6e-13 77.8 52 73.1
Gohir.D09G177300 Gossypium hirsutum HOM05D002831 ORTHO05D010484 3.6e-13 77.8 52 73.1
Manes.06G152150 Manihot esculenta HOM05D002831 ORTHO05D010484 3.6e-13 77.8 52 73.1
CAN.G204.17 Capsicum annuum HOM05D002831 ORTHO05D010484 4.8e-13 77.4 51 72.5
Gorai.006G199300 Gossypium raimondii HOM05D002831 ORTHO05D010484 4.8e-13 77.4 52 71.2
Glyma.09G132600 Glycine max HOM05D002831 ORTHO05D010484 6.2e-13 77.0 51 74.5
Glyma.16G179250 Glycine max HOM05D002831 ORTHO05D010484 6.2e-13 77.0 51 74.5
Prupe.7G027400 Prunus persica HOM05D002831 ORTHO05D010484 6.2e-13 77.0 51 74.5
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 8.1e-13 76.6 52 75.0
Glyma.20G162551 Glycine max HOM05D002831 ORTHO05D010484 1.8e-12 75.5 52 71.2
MD07G1278600 Malus domestica HOM05D002831 ORTHO05D010484 1.8e-12 75.5 52 71.2
Potri.017G143300 Populus trichocarpa HOM05D002831 ORTHO05D010484 3.1e-12 74.7 52 73.1
Carub.0008s1269 Capsella rubella HOM05D002831 ORTHO05D010484 4.0e-12 74.3 52 65.4
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 5.3e-12 73.9 53 69.8
Gohir.A12G255400 Gossypium hirsutum HOM05D002831 ORTHO05D010484 2.6e-11 71.6 52 67.3
Gohir.D12G256800 Gossypium hirsutum HOM05D002831 ORTHO05D010484 2.6e-11 71.6 52 67.3
Gorai.008G275000 Gossypium raimondii HOM05D002831 ORTHO05D010484 2.6e-11 71.6 52 67.3
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 2.6e-11 71.6 55 69.1
CSS0001563 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 3.4e-11 71.2 52 69.2
CSS0038907 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 3.4e-11 71.2 52 69.2
Glyma.10G231251 Glycine max HOM05D002831 ORTHO05D010484 4.5e-11 70.9 52 63.5
CARHR233120 Cardamine hirsuta HOM05D002831 ORTHO05D010484 9.9e-11 69.7 52 63.5
ClCG05G008350 Citrullus lanatus HOM05D002831 ORTHO05D010484 1.3e-10 69.3 58 62.1
Carub.0007s1529 Capsella rubella HOM05D002831 ORTHO05D010484 2.2e-10 68.6 52 59.6
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 2.9e-10 68.2 55 69.1
BolC1t02050H Brassica oleracea HOM05D002831 ORTHO05D010484 6.4e-10 67.0 52 61.5
Lalb_Chr02g0141241 Lupinus albus HOM05D002831 ORTHO05D010484 8.4e-10 66.6 53 67.9
CiPaw.12G018400 Carya illinoinensis HOM05D002831 ORTHO05D010484 1.1e-09 66.2 44 77.3
BolC1t02047H Brassica oleracea HOM05D002831 ORTHO05D010484 1.4e-09 65.9 51 64.7
BraA01t01646Z Brassica rapa HOM05D002831 ORTHO05D010484 1.4e-09 65.9 51 64.7
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 1.4e-09 65.9 46 63.0
BraA01t01649Z Brassica rapa HOM05D002831 ORTHO05D010484 1.9e-09 65.5 52 59.6
FAN03G0192 Fragaria x ananassa HOM05D002831 ORTHO05D010484 1.9e-09 65.5 50 68.0
Cfa016283 Carpinus fangiana HOM05D002831 ORTHO05D004341 3.2e-09 64.7 43 76.7
RcHm_v2.0_Chr1g0378241 Rosa chinensis HOM05D002831 ORTHO05D004341 4.2e-09 64.3 44 75.0
Peaxi162Scf00618g00726 Petunia axillaris HOM05D002831 ORTHO05D010484 5.4e-09 63.9 45 68.9
VMungo0464G0591 Vigna mungo HOM05D002831 ORTHO05D004341 5.4e-09 63.9 45 73.3
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 7.1e-09 63.5 50 66.0
SGA_v2.0_scaffold60G21104 Striga asiatica HOM05D002831 ORTHO05D004341 2.7e-08 61.6 45 62.2
A02p11710 Brassica napus HOM05D002831 ORTHO05D010484 3.5e-08 61.2 72 41.7
A03p56200 Brassica napus HOM05D002831 ORTHO05D010484 3.5e-08 61.2 51 56.9
BraA03t14690Z Brassica rapa HOM05D002831 ORTHO05D010484 3.5e-08 61.2 51 56.9
Migut.F01087 Erythranthe guttata HOM05D002831 ORTHO05D004341 6.0e-08 60.5 46 60.9
vmacro09817 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 7.9e-08 60.1 45 66.7
BolC7t45935H Brassica oleracea HOM05D002831 ORTHO05D010484 1.0e-07 59.7 54 51.9
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 1.0e-07 59.7 46 67.4
Lalb_Chr21g0305231 Lupinus albus HOM05D002831 ORTHO05D010484 1.8e-07 58.9 54 64.8
Sabra06G0007800 Salix brachista HOM05D002831 ORTHO05D010484 2.3e-07 58.5 43 72.1
VMungo0720G1018 Vigna mungo HOM05D002831 ORTHO05D004341 5.1e-07 57.4 43 67.4
Lalb_Chr03g0034821 Lupinus albus HOM05D002831 ORTHO05D010484 6.7e-07 57.0 50 60.0
Ah.13g069160 Amaranthus hybridus HOM05D004727 ORTHO05D005788 8.7e-07 56.6 59 50.8
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 5.6e-06 53.9 52 50.0
Oeu045362.1 Olea europaea HOM05D002831 ORTHO05D004341 7.4e-06 53.5 32 75.0
CSS0020125 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 9.6e-06 53.1 63 50.8
CSS0026204 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 9.6e-06 53.1 63 50.8
TPR.G7753 Trifolium pratense HOM05D002831 ORTHO05D004341 9.6e-06 53.1 43 65.1


User provided reference genes

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