Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003825g0080 Nicotiana tabacum HOM05D002831 ORTHO05D004341 8.5e-106 387.1 210 100.0
Peaxi162Scf00618g00748 Petunia axillaris HOM05D001680 ORTHO05D004341 9.8e-86 320.5 210 83.3
PGSC0003DMG400028898 Solanum tuberosum HOM05D002831 ORTHO05D004341 6.4e-85 317.8 209 85.2
Sopen06g012030 Solanum pennellii HOM05D002831 ORTHO05D004341 2.7e-83 312.4 209 83.7
Nitab4.5_0000248g0010 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.7e-82 309.7 181 93.4
Peaxi162Scf00444g00016 Petunia axillaris HOM05D002831 ORTHO05D004341 7.1e-76 287.7 211 77.7
Nitab4.5_0000572g0140 Nicotiana tabacum HOM05D002831 ORTHO05D004341 8.6e-74 280.8 211 75.4
CAN.G126.12 Capsicum annuum HOM05D002831 ORTHO05D004341 3.6e-72 275.4 212 74.5
Solyc06g036250.2 Solanum lycopersicum HOM05D002831 ORTHO05D004341 8.1e-72 274.2 185 82.7
Nitab4.5_0000084g0400 Nicotiana tabacum HOM05D002831 ORTHO05D004341 3.4e-70 268.9 211 72.5
Sopen03g003930 Solanum pennellii HOM05D002831 ORTHO05D004341 3.0e-66 255.8 209 72.2
PGSC0003DMG400010167 Solanum tuberosum HOM05D002831 ORTHO05D004341 5.1e-66 255.0 198 74.7
CAN.G204.16 Capsicum annuum HOM05D002831 ORTHO05D004341 4.3e-65 251.9 199 75.9
Dinv28390 Davidia involucrata HOM05D002831 ORTHO05D004341 3.8e-61 238.8 209 65.1
Cc02_g02420 Coffea canephora HOM05D002831 ORTHO05D004341 2.4e-60 236.1 209 67.0
CSS0004722 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 2.7e-59 232.6 209 62.7
CSS0021117 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 2.7e-59 232.6 209 62.7
CSS0012099 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 6.0e-59 231.5 209 64.1
CSS0034926 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 6.0e-59 231.5 209 64.1
Actinidia34155 Actinidia chinensis HOM05D002831 ORTHO05D004341 1.7e-58 229.9 209 66.5
Lj1P1004T73 Lonicera japonica HOM05D002831 ORTHO05D004341 8.7e-58 227.6 206 63.6
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 5.6e-57 224.9 199 66.8
Actinidia08576 Actinidia chinensis HOM05D002831 ORTHO05D004341 2.4e-55 219.5 208 63.9
Oeu045362.1 Olea europaea HOM05D002831 ORTHO05D004341 3.1e-55 219.2 209 64.1
Oeu036905.1 Olea europaea HOM05D002831 ORTHO05D004341 4.0e-55 218.8 213 63.4
Duzib084G1013 Durio zibethinus HOM05D002831 ORTHO05D004341 6.9e-55 218.0 207 65.7
Oeu060465.1 Olea europaea HOM05D002831 ORTHO05D004341 1.3e-53 213.8 202 58.4
COL.COLO4_10060 Corchorus olitorius HOM05D002831 ORTHO05D004341 2.2e-53 213.0 208 65.4
Potri.017G143215 Populus trichocarpa HOM05D002831 ORTHO05D004341 6.4e-53 211.5 209 63.2
Sabra17G0120100 Salix brachista HOM05D002831 ORTHO05D004341 8.4e-53 211.1 207 63.3
Cpa.g.sc107.104 Carica papaya HOM05D002831 ORTHO05D004341 1.1e-52 210.7 211 62.1
Atru.chr1.379 Acer truncatum HOM05D002831 ORTHO05D004341 1.4e-52 210.3 210 63.8
Atru.ctg97_1.16 Acer truncatum HOM05D002831 ORTHO05D004341 1.4e-52 210.3 210 63.8
Thecc.03G183700 Theobroma cacao HOM05D002831 ORTHO05D004341 3.2e-52 209.1 207 64.7
TWI23G0387 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 4.2e-52 208.8 207 55.6
Potri.004G079900 Populus trichocarpa HOM05D002831 ORTHO05D004341 9.3e-52 207.6 207 61.4
DCAR_009393 Daucus carota HOM05D002831 ORTHO05D004341 1.2e-51 207.2 209 60.3
Duzib068G1050 Durio zibethinus HOM05D002831 ORTHO05D004341 2.1e-51 206.5 209 64.1
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 3.5e-51 205.7 204 61.3
TAR374G0609 Trochodendron aralioides HOM05D002831 ORTHO05D004341 1.7e-50 203.4 210 61.9
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 3.0e-50 202.6 204 60.8
SalBow4G1512 Salvia bowleyana HOM05D002831 ORTHO05D004341 8.7e-50 201.1 210 64.3
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 3.3e-49 199.1 207 58.9
Ciclev10005857m.g Citrus clementina HOM05D002831 ORTHO05D004341 7.3e-49 198.0 209 58.9
Actinidia31838 Actinidia chinensis HOM05D002831 ORTHO05D004341 9.6e-49 197.6 212 60.8
Rhsim09G0200400 Rhododendron simsii HOM05D002831 ORTHO05D004341 1.3e-48 197.2 208 58.7
Duzib205G1365 Durio zibethinus HOM05D002831 ORTHO05D004341 3.6e-48 195.7 206 62.1
DCAR_020268 Daucus carota HOM05D002831 ORTHO05D004341 4.8e-48 195.3 209 53.6
TWI39G0102 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 1.8e-47 193.4 209 56.0
Hma1.2p1_0274F.1_g110180 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 5.3e-47 191.8 209 57.9
TWI14G0525 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 1.2e-46 190.7 208 57.2
MSTRG.74 Avicennia marina HOM05D002831 ORTHO05D004341 1.3e-45 187.2 209 59.3
MSTRG.27090 Avicennia marina HOM05D002831 ORTHO05D004341 8.4e-45 184.5 208 60.1
AUR62021127 Chenopodium quinoa HOM05D002831 ORTHO05D004341 4.2e-44 182.2 200 53.5
Gohir.D12G256900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 4.2e-44 182.2 208 58.2
Gorai.008G275100 Gossypium raimondii HOM05D002831 ORTHO05D004341 4.2e-44 182.2 208 58.2
Gohir.A12G255500 Gossypium hirsutum HOM05D002831 ORTHO05D004341 5.4e-44 181.8 208 58.2
Gorai.006G199200 Gossypium raimondii HOM05D002831 ORTHO05D004341 9.3e-44 181.0 214 55.6
AUR62031417 Chenopodium quinoa HOM05D002831 ORTHO05D004341 2.1e-43 179.9 200 53.0
Eucgr.A02748 Eucalyptus grandis HOM05D002831 ORTHO05D004341 6.0e-43 178.3 206 53.4
Gohir.D09G177200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.3e-42 177.2 214 55.6
Aqoxy7G00243 Aquilegia oxysepala HOM05D002831 ORTHO05D004341 3.9e-42 175.6 208 55.8
Gohir.A09G182600 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.5e-41 173.7 216 55.1
EL10Ac3g05428 Beta vulgaris HOM05D002831 ORTHO05D004341 1.9e-41 173.3 200 58.5
CiPaw.06G003300 Carya illinoinensis HOM05D002831 ORTHO05D004341 1.6e-40 170.2 208 54.3
Manes.14G023000 Manihot esculenta HOM05D002831 ORTHO05D004341 1.6e-40 170.2 206 52.4
QL09p012962 Quercus lobata HOM05D002831 ORTHO05D004341 1.6e-40 170.2 210 52.9
Prupe.2G300400 Prunus persica HOM05D002831 ORTHO05D004341 2.1e-40 169.9 211 54.0
PGR042G3073 Punica granatum HOM05D002831 ORTHO05D004341 6.2e-40 168.3 206 56.3
Cfa016283 Carpinus fangiana HOM05D002831 ORTHO05D004341 1.1e-39 167.5 210 53.3
THA.LOC104800271 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 1.8e-39 166.8 194 49.5
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 2.4e-39 166.4 211 55.5
Glyma.09G132500 Glycine max HOM05D002831 ORTHO05D004341 3.1e-39 166.0 205 56.6
PSO478G4817 Papaver somniferum HOM05D002831 ORTHO05D004341 3.1e-39 166.0 202 52.0
CiPaw.06G003100 Carya illinoinensis HOM05D002831 ORTHO05D004341 9.0e-39 164.5 208 53.8
Lalb_Chr02g0141231 Lupinus albus HOM05D002831 ORTHO05D004341 2.0e-38 163.3 190 58.9
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 1.0e-37 161.0 197 57.4
PSO782G2858 Papaver somniferum HOM05D002831 ORTHO05D004341 2.2e-37 159.8 197 52.3
Glyma.16G179300 Glycine max HOM05D002831 ORTHO05D004341 2.9e-37 159.5 204 53.4
MD01G1207900 Malus domestica HOM05D002831 ORTHO05D004341 3.8e-37 159.1 213 52.6
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 4.9e-37 158.7 207 50.2
CANSAT11G0421 Cannabis sativa HOM05D002831 ORTHO05D004341 4.9e-37 158.7 212 52.8
Manes.06G152100 Manihot esculenta HOM05D002831 ORTHO05D004341 6.5e-37 158.3 206 50.0
SGA_v2.0_scaffold113G31691 Striga asiatica HOM05D002831 ORTHO05D008967 6.5e-37 158.3 210 56.7
MD07G1278500 Malus domestica HOM05D002831 ORTHO05D004341 1.1e-36 157.5 213 52.6
Gorai.007G012600 Gossypium raimondii HOM05D002831 ORTHO05D004341 1.4e-36 157.1 210 55.7
Gohir.A11G011900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.9e-36 156.8 210 55.7
Phvul.004G109000 Phaseolus vulgaris HOM05D002831 ORTHO05D004341 2.5e-36 156.4 204 52.9
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 3.2e-36 156.0 206 53.4
TAR375G0840 Trochodendron aralioides HOM05D002831 ORTHO05D004341 4.2e-36 155.6 209 52.6
VMungo0464G0591 Vigna mungo HOM05D002831 ORTHO05D004341 4.2e-36 155.6 204 52.9
Gohir.D11G011100 Gossypium hirsutum HOM05D002831 ORTHO05D004341 5.5e-36 155.2 210 55.2
FAN03G0781 Fragaria x ananassa HOM05D002831 ORTHO05D004341 3.5e-35 152.5 214 50.9
unitig_37.g11969 Utricularia gibba HOM05D002831 ORTHO05D004341 3.5e-35 152.5 210 51.4
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 7.9e-35 151.4 194 57.7
Hma1.2p1_0327F.1_g126410 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 7.9e-35 151.4 207 48.8
FAN01G0089 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.3e-34 150.6 214 50.5
FAN03G0359 Fragaria x ananassa HOM05D002831 ORTHO05D004341 3.9e-34 149.1 214 50.5
Gohir.A08G098200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 3.9e-34 149.1 194 57.2
Gohir.D08G109800 Gossypium hirsutum HOM05D002831 ORTHO05D004341 3.9e-34 149.1 194 57.2
Sp7g23710 Schrenkiella parvula HOM05D002831 ORTHO05D004341 3.9e-34 149.1 207 46.4
Aa31LG3G8920 Aethionema arabicum HOM05D002831 ORTHO05D004341 5.1e-34 148.7 183 47.5
RcHm_v2.0_Chr1g0378241 Rosa chinensis HOM05D002831 ORTHO05D004341 8.7e-34 147.9 205 51.7
Carub.0007s1530 Capsella rubella HOM05D002831 ORTHO05D004341 1.9e-33 146.7 207 46.4
TPR.G7753 Trifolium pratense HOM05D002831 ORTHO05D004341 1.9e-33 146.7 204 52.5
AL7G27390 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 3.3e-33 146.0 207 47.8
AL7G27410 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 3.3e-33 146.0 207 47.8
FvH4_7g30190 Fragaria vesca HOM05D002831 ORTHO05D004341 5.7e-33 145.2 214 50.0
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 5.7e-33 145.2 214 50.0
Thhalv10027473m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 7.4e-33 144.8 207 45.9
Ah.13g069150 Amaranthus hybridus HOM05D002831 ORTHO05D004341 9.6e-33 144.4 206 48.5
AL8G27020 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 9.6e-33 144.4 196 46.9
Lj5g0008853 Lotus japonicus HOM05D002831 ORTHO05D004341 1.3e-32 144.1 205 51.7
AT4G25690 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 1.6e-32 143.7 205 48.3
AT4G25670 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 2.1e-32 143.3 207 47.3
Haze_00039 Corylus avellana HOM05D002831 ORTHO05D004341 2.1e-32 143.3 145 53.8
Lalb_Chr03g0034811 Lupinus albus HOM05D002831 ORTHO05D004341 2.1e-32 143.3 204 52.9
Ca_10728_v3 Cicer arietinum L. HOM05D002831 ORTHO05D004341 2.8e-32 142.9 203 51.2
FAN10G3196 Fragaria x ananassa HOM05D002831 ORTHO05D004341 3.7e-32 142.5 214 49.5
CARHR233110 Cardamine hirsuta HOM05D002831 ORTHO05D004341 4.8e-32 142.1 207 45.9
Thhalv10026278m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 8.2e-32 141.4 205 47.3
SGA_v2.0_scaffold60G21104 Striga asiatica HOM05D002831 ORTHO05D004341 1.1e-31 141.0 206 54.4
CsaV3_3G017430 Cucumis sativus L. HOM05D002831 ORTHO05D004341 3.1e-31 139.4 206 49.5
Psat6g196360 Pisum sativum HOM05D002831 ORTHO05D004341 3.1e-31 139.4 205 52.7
Migut.F01087 Erythranthe guttata HOM05D002831 ORTHO05D004341 4.1e-31 139.0 197 52.3
CiPaw.12G018300 Carya illinoinensis HOM05D002831 ORTHO05D004341 6.9e-31 138.3 186 53.8
MBI11_g04751_MAGBIO Magnolia biondii HOM05D002831 ORTHO05D004341 6.9e-31 138.3 190 55.8
ATR0661G020 Amborella trichopoda HOM05D002831 ORTHO05D004341 1.2e-30 137.5 129 62.0
Carub.0008s1268 Capsella rubella HOM05D002831 ORTHO05D004341 1.5e-30 137.1 267 38.6
MELO3C006940.2 Cucumis melo HOM05D002831 ORTHO05D004341 1.5e-30 137.1 206 50.0
Glyma.10G231300 Glycine max HOM05D002831 ORTHO05D004341 1.5e-30 137.1 203 49.3
BraA01t01648Z Brassica rapa HOM05D002831 ORTHO05D004341 2.6e-30 136.3 207 46.4
THA.LOC104811959 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 2.6e-30 136.3 259 38.2
Sc19g0001290 Simmondsia chinensis HOM05D002831 ORTHO05D004341 5.8e-30 135.2 198 50.0
AT5G52550 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 1.0e-29 134.4 197 44.2
BraA01t01645Z Brassica rapa HOM05D002831 ORTHO05D004341 1.0e-29 134.4 208 44.7
Glyma.20G162500 Glycine max HOM05D002831 ORTHO05D004341 1.0e-29 134.4 203 48.3
BolC1t02049H Brassica oleracea HOM05D002831 ORTHO05D004341 1.7e-29 133.7 209 52.2
BraA02t06237Z Brassica rapa HOM05D002831 ORTHO05D004341 1.7e-29 133.7 196 42.9
BNapus_Darmor_BZH_scaffold_232p00070 Brassica napus HOM05D002831 ORTHO05D004341 2.2e-29 133.3 195 45.1
ClCG05G008340 Citrullus lanatus HOM05D002831 ORTHO05D004341 2.2e-29 133.3 206 49.5
Sp7g23730 Schrenkiella parvula HOM05D002831 ORTHO05D004341 3.8e-29 132.5 202 47.0
BolC1t02046H Brassica oleracea HOM05D002831 ORTHO05D004341 1.1e-28 131.0 211 44.5
vmacro09817 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 1.4e-28 130.6 119 72.3
A02p11720 Brassica napus HOM05D002831 ORTHO05D004341 1.9e-28 130.2 196 42.3
TPR.G21560 Trifolium pratense HOM05D002831 ORTHO05D004341 3.2e-28 129.4 206 50.0
A01p16930 Brassica napus HOM05D002831 ORTHO05D004341 3.5e-27 125.9 205 43.4
MSTRG.8713 Avicennia marina HOM05D002831 ORTHO05D004341 1.0e-26 124.4 212 46.2
Sed0011382 Sechium edule HOM05D002831 ORTHO05D004341 1.3e-26 124.0 206 47.1
unitig_0.g2470 Utricularia gibba HOM05D002831 ORTHO05D004341 1.3e-26 124.0 204 43.1
C01p21210 Brassica napus HOM05D002831 ORTHO05D004341 1.8e-26 123.6 207 44.0
CARHR233150 Cardamine hirsuta HOM05D002831 ORTHO05D004341 3.0e-26 122.9 207 44.9
Sed0001656 Sechium edule HOM05D002831 ORTHO05D004341 3.9e-26 122.5 205 47.3
HPP92_022210 Vanilla planifolia HOM05D002831 ORTHO05D004341 3.9e-26 122.5 195 45.6
HPP92_022228 Vanilla planifolia HOM05D002831 ORTHO05D004341 6.7e-26 121.7 195 45.6
BcaNung07307 Brassica carinata HOM05D002831 ORTHO05D004341 1.1e-25 120.9 219 39.7
Lalb_Chr06g0161301 Lupinus albus HOM05D002831 ORTHO05D004341 1.5e-25 120.6 194 46.4
SGA_v2.0_scaffold10G05296 Striga asiatica HOM05D002831 ORTHO05D004341 2.5e-25 119.8 209 43.5
BcaC06g32789 Brassica carinata HOM05D002831 ORTHO05D004341 3.7e-24 115.9 210 43.3
BcaC03g14518 Brassica carinata HOM05D002831 ORTHO05D004341 2.4e-23 113.2 119 51.3
BcaB05g21966 Brassica carinata HOM05D002831 ORTHO05D004341 5.3e-23 112.1 192 44.3
Lalb_Chr21g0305221 Lupinus albus HOM05D002831 ORTHO05D004341 6.9e-23 111.7 154 55.2
Sabra06G0007800 Salix brachista HOM05D002831 ORTHO05D010484 9.0e-23 111.3 128 47.7
HPP92_022231 Vanilla planifolia HOM05D002831 ORTHO05D004341 1.2e-22 110.9 135 53.3
ECA232G1618 Erigeron canadensis HOM05D002831 ORTHO05D004341 1.3e-21 107.5 222 45.5
HanXRQChr14g0462531 Helianthus annuus HOM05D002831 ORTHO05D004341 2.2e-21 106.7 218 45.4
VMungo0720G1018 Vigna mungo HOM05D002831 ORTHO05D004341 3.8e-21 105.9 196 45.4
FAN10G0429 Fragaria x ananassa HOM05D002831 ORTHO05D004341 4.2e-20 102.4 214 41.1
HPP92_008924 Vanilla planifolia HOM05D002831 ORTHO05D004341 4.2e-20 102.4 191 42.4
SEGI_15574 Sequoiadendron giganteum HOM05D002831 ORTHO05D004341 2.1e-19 100.1 237 40.5
Medtr1g100090 Medicago truncatula HOM05D002831 ORTHO05D004341 2.7e-19 99.8 129 59.7
BraA03t14689Z Brassica rapa HOM05D000048 ORTHO05D000445 1.4e-18 97.4 104 66.3
C07p54490 Brassica napus HOM05D000048 ORTHO05D000445 4.3e-17 92.4 98 59.2
BolC7t45934H Brassica oleracea HOM05D000048 ORTHO05D000445 4.3e-17 92.4 98 59.2
Os02g0104200 Oryza sativa ssp. japonica HOM05D002831 ORTHO05D004341 7.4e-17 91.7 202 42.6
Zm00001eb229390 Zea mays HOM05D002831 ORTHO05D004341 8.2e-16 88.2 202 41.6
CARHR265540 Cardamine hirsuta HOM05D002831 ORTHO05D004341 1.1e-15 87.8 84 60.7
Lsat_1_v5_gn_2_131301 Lactuca sativa HOM05D002831 ORTHO05D004341 6.9e-15 85.1 211 44.5
ECA238G2131 Erigeron canadensis HOM05D002831 ORTHO05D004341 1.5e-14 84.0 206 42.2
Carub.0007s1527 Capsella rubella HOM05D002831 ORTHO05D004341 3.8e-13 79.3 72 63.9
Lsat_1_v5_gn_9_56481 Lactuca sativa HOM05D002831 ORTHO05D004341 5.0e-13 79.0 208 41.3
Nn1g08525 Nelumbo nucifera HOM05D002831 ORTHO05D004341 2.1e-11 73.6 142 37.3
Lj8C18T8 Lonicera japonica HOM05D002831 ORTHO05D004341 5.7e-09 65.5 213 39.4
Os06g0106900 Oryza sativa ssp. japonica HOM05D002831 ORTHO05D004341 6.3e-08 62.0 106 50.0
Pp3c26_7830 Physcomitrium patens HOM05D040812 ORTHO05D031180 6.3e-08 62.0 200 38.0
Nn1g01625 Nelumbo nucifera HOM05D002831 ORTHO05D004341 5.3e-07 58.9 50 70.0


User provided reference genes

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