Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003825g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.3e-105 384.0 184 100.0
Nitab4.5_0005093g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.3e-27 125.2 64 89.1
Nitab4.5_0001037g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.9e-27 124.8 73 80.8
Nitab4.5_0000749g0170 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.5e-26 123.6 64 89.1
Nitab4.5_0004282g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.4e-26 122.5 71 81.7
Nitab4.5_0002879g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.5e-26 122.1 60 91.7
Nitab4.5_0007095g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.3e-25 120.6 57 94.7
Nitab4.5_0000641g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.2e-25 119.8 58 93.1
Nitab4.5_0002020g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.0e-25 118.6 67 83.6
Nitab4.5_0007833g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.0e-25 118.6 59 89.8
Nitab4.5_0000947g0110 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.5e-25 118.2 59 89.8
Nitab4.5_0004319g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.1e-24 117.5 63 84.1
Nitab4.5_0000736g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.4e-24 117.1 58 89.7
Nitab4.5_0001587g0090 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.4e-24 117.1 68 77.9
Nitab4.5_0000946g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.9e-24 116.7 57 91.2
Nitab4.5_0002513g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.9e-24 116.7 64 82.8
Nitab4.5_0006733g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.5e-24 116.3 57 93.0
Nitab4.5_0002558g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.2e-24 115.9 61 85.2
Nitab4.5_0007758g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.2e-24 115.5 57 91.2
Nitab4.5_0008120g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.2e-24 115.5 58 89.7
Nitab4.5_0003744g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.2e-23 114.0 58 87.9
Nitab4.5_0003811g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.1e-23 113.2 71 76.1
Nitab4.5_0008914g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.1e-23 113.2 58 87.9
Nitab4.5_0002790g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.7e-23 112.8 70 77.1
Nitab4.5_0000594g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.6e-23 112.5 57 89.5
Nitab4.5_0006664g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.6e-23 112.5 78 66.7
Nitab4.5_0001940g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.6e-23 112.1 81 67.9
Nitab4.5_0002276g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.6e-23 112.1 59 86.4
Nitab4.5_0005347g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.6e-23 112.1 72 72.2
Nitab4.5_0008466g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.6e-23 112.1 57 87.7
Nitab4.5_0006876g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.1e-23 111.7 58 87.9
Nitab4.5_0002639g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.0e-22 110.9 71 74.6
Nitab4.5_0004709g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.4e-22 110.5 58 82.8
Nitab4.5_0006882g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.4e-22 110.5 66 75.8
Nitab4.5_0005490g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-22 110.2 57 86.0
Nitab4.5_0005776g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-22 110.2 53 90.6
Nitab4.5_0003636g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.0e-22 109.4 57 87.7
Nitab4.5_0001075g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.7e-22 108.2 57 86.0
Nitab4.5_0000807g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.8e-22 107.8 54 88.9
Nitab4.5_0006505g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.8e-22 107.8 67 74.6
Nitab4.5_0013160g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.8e-22 107.8 57 86.0
Nitab4.5_0002497g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.1e-21 107.5 57 84.2
Nitab4.5_0003859g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.1e-21 107.5 61 83.6
Nitab4.5_0010480g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.1e-21 107.5 51 92.2
Nitab4.5_0000684g0080 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.5e-21 107.1 61 82.0
Nitab4.5_0002451g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.5e-21 107.1 55 87.3
Nitab4.5_0002209g0220 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.0e-21 106.7 58 82.8
Nitab4.5_0004882g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.5e-21 106.3 57 82.5
Nitab4.5_0003641g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.7e-21 104.4 57 82.5
Nitab4.5_0004216g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.2e-20 103.2 68 72.1
Nitab4.5_0004911g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.8e-20 102.8 79 62.0
Nitab4.5_0001169g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.4e-19 99.8 50 86.0
Nitab4.5_0009029g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.4e-19 99.8 50 88.0
Nitab4.5_0002892g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.1e-19 97.8 56 75.0
Nitab4.5_0004217g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.4e-18 95.9 50 86.0
Nitab4.5_0012681g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.5e-18 95.5 55 72.7
Nitab4.5_0000940g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.9e-18 95.1 55 74.5
Nitab4.5_0002558g0180 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.7e-18 94.7 50 84.0
Nitab4.5_0002973g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.0e-17 92.0 45 88.9
Nitab4.5_0003691g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.5e-17 91.7 58 69.0
Nitab4.5_0000435g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.1e-16 90.9 68 63.2
Nitab4.5_0006344g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.4e-16 90.5 85 48.2
Nitab4.5_0003980g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.2e-16 89.4 55 69.1
Nitab4.5_0003794g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.5e-16 88.6 48 77.1
Nitab4.5_0000963g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.6e-15 87.0 87 51.7
Nitab4.5_0002460g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.6e-15 87.0 43 90.7
Nitab4.5_0002496g0080 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.6e-15 87.0 47 76.6
Nitab4.5_0004188g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.6e-15 87.0 49 83.7
Nitab4.5_0006841g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.6e-15 87.0 53 67.9
Nitab4.5_0001665g0070 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.6e-15 85.9 72 61.1
Nitab4.5_0002835g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.6e-15 85.9 44 88.6
Nitab4.5_0000801g0080 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.0e-14 84.3 39 94.9
Nitab4.5_0003231g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.4e-14 84.0 59 61.0
Nitab4.5_0000778g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.8e-14 83.6 45 82.2
Nitab4.5_0003338g0100 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.9e-14 82.4 47 78.7
Nitab4.5_0003083g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.7e-14 81.6 43 79.1
Nitab4.5_0007525g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.8e-14 81.3 42 81.0
Nitab4.5_0000534g0100 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.1e-13 80.9 48 68.8
Nitab4.5_0000371g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.6e-13 79.7 55 60.0
Nitab4.5_0001224g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.4e-13 78.2 46 69.6
Nitab4.5_0001460g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.4e-13 78.2 45 75.6
Nitab4.5_0004248g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 9.7e-13 77.8 35 97.1
Nitab4.5_0001161g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.7e-12 75.9 66 57.6
Nitab4.5_0003385g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.4e-11 73.2 38 81.6
Nitab4.5_0004049g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.4e-11 73.2 41 73.2
Nitab4.5_0001593g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.1e-11 72.8 44 70.5
Nitab4.5_0003148g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.1e-11 72.4 34 91.2
Nitab4.5_0003975g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 4.1e-11 72.4 34 94.1
Nitab4.5_0007969g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.0e-11 71.6 34 91.2
Nitab4.5_0002081g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.2e-10 70.9 38 81.6
Nitab4.5_0000339g0060 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.0e-10 70.1 37 81.1
Nitab4.5_0000817g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 2.6e-10 69.7 40 72.5
Nitab4.5_0004735g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.5e-10 69.3 76 51.3
Nitab4.5_0004759g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.5e-10 69.3 41 65.9
Nitab4.5_0003284g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 7.7e-10 68.2 41 73.2
Nitab4.5_0004022g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.3e-09 67.4 35 82.9
Nitab4.5_0002252g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.7e-09 67.0 34 82.4
Nitab4.5_0002413g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.7e-09 67.0 56 57.1
Nitab4.5_0011203g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.7e-09 67.0 39 74.4
Nitab4.5_0001430g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.0e-09 65.5 34 82.4
Nitab4.5_0001098g0050 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.5e-09 65.1 49 63.3
Nitab4.5_0000197g0040 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.5e-09 64.7 37 78.4
Nitab4.5_0002272g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.5e-09 64.7 38 73.7
Nitab4.5_0001457g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.1e-08 64.3 29 96.6
Nitab4.5_0014647g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.1e-08 64.3 31 90.3
Nitab4.5_0010860g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.5e-08 63.9 31 83.9
PGSC0003DMG400047118 Solanum tuberosum HOM05D011738 ORTHO05D014268 3.2e-08 62.8 48 50.0
PGSC0003DMG400044192 Solanum tuberosum HOM05D011738 ORTHO05D014268 9.4e-08 61.2 48 50.0
Nitab4.5_0004100g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.2e-07 60.8 43 65.1
Nitab4.5_0005787g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.2e-07 60.8 32 84.4
Nitab4.5_0004671g0020 Nicotiana tabacum HOM05D006630 ORTHO05D008476 6.1e-07 58.5 30 86.7
Nitab4.5_0003121g0030 Nicotiana tabacum HOM05D006630 ORTHO05D008476 8.0e-07 58.2 41 65.9
PGSC0003DMG400040062 Solanum tuberosum HOM05D011738 ORTHO05D014268 1.0e-06 57.8 41 56.1
Nitab4.5_0000751g0060 Nicotiana tabacum HOM05D006630 ORTHO05D282353 1.4e-06 57.4 54 53.7
Nitab4.5_0004609g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 1.4e-06 57.4 53 56.6
Nitab4.5_0011803g0010 Nicotiana tabacum HOM05D006630 ORTHO05D008476 3.0e-06 56.2 34 67.6
PGSC0003DMG400040242 Solanum tuberosum HOM05D011738 ORTHO05D014268 4.0e-06 55.8 59 42.4
Nitab4.5_0003469g0080 Nicotiana tabacum HOM05D006630 ORTHO05D008476 5.2e-06 55.5 27 81.5


User provided reference genes

Program Settings