Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003816g0110 Nicotiana tabacum HOM05D007602 ORTHO05D009086 1.6e-39 165.6 81 100.0
Nitab4.5_0003281g0040 Nicotiana tabacum HOM05D007602 ORTHO05D009086 2.6e-34 148.3 75 97.3
Peaxi162Scf00016g01124 Petunia axillaris HOM05D007602 ORTHO05D009086 4.0e-11 71.2 40 85.0
Solyc01g109220.4 Solanum lycopersicum HOM05D007602 ORTHO05D009086 6.8e-11 70.5 35 91.4
PGSC0003DMG400025161 Solanum tuberosum HOM05D007602 ORTHO05D009086 6.8e-11 70.5 35 91.4
Manes.15G146500 Manihot esculenta HOM05D007602 ORTHO05D009086 2.0e-10 68.9 35 85.7
Ca_07356_v3 Cicer arietinum L. HOM05D007602 ORTHO05D009086 3.4e-10 68.2 35 85.7
Lalb_Chr03g0025901 Lupinus albus HOM05D007602 ORTHO05D009086 4.4e-10 67.8 35 85.7
Manes.17G097600 Manihot esculenta HOM05D007602 ORTHO05D009086 4.4e-10 67.8 35 82.9
CAN.G322.99 Capsicum annuum HOM05D007602 ORTHO05D009086 7.5e-10 67.0 35 85.7
COL.COLO4_17788 Corchorus olitorius HOM05D007602 ORTHO05D009086 7.5e-10 67.0 35 88.6
Gohir.A04G129200 Gossypium hirsutum HOM05D007602 ORTHO05D009086 7.5e-10 67.0 35 82.9
Gohir.A04G129300 Gossypium hirsutum HOM05D007602 ORTHO05D009086 7.5e-10 67.0 35 82.9
Gohir.D04G174400 Gossypium hirsutum HOM05D007602 ORTHO05D009086 7.5e-10 67.0 35 82.9
Gorai.012G163800 Gossypium raimondii HOM05D007602 ORTHO05D009086 7.5e-10 67.0 35 82.9
Gorai.012G163900 Gossypium raimondii HOM05D007602 ORTHO05D009086 7.5e-10 67.0 35 82.9
Lj3g0015904 Lotus japonicus HOM05D007602 ORTHO05D009086 7.5e-10 67.0 35 82.9
Thecc.08G131300 Theobroma cacao HOM05D007602 ORTHO05D009086 7.5e-10 67.0 35 82.9
MELO3C021943.2 Cucumis melo HOM05D007602 ORTHO05D009086 9.9e-10 66.6 35 82.9
CsaV3_2G014370 Cucumis sativus L. HOM05D007602 ORTHO05D009086 9.9e-10 66.6 35 82.9
Glyma.12G047200 Glycine max HOM05D007602 ORTHO05D009086 9.9e-10 66.6 35 82.9
Medtr4g068710 Medicago truncatula HOM05D007602 ORTHO05D009086 9.9e-10 66.6 35 82.9
CANSAT25G1814 Cannabis sativa HOM05D007602 ORTHO05D009086 1.3e-09 66.2 35 82.9
Cpa.g.sc62.91 Carica papaya HOM05D007602 ORTHO05D009086 1.3e-09 66.2 35 82.9
Ciclev10029767m.g Citrus clementina HOM05D007602 ORTHO05D009086 1.7e-09 65.9 35 80.0
Oeu007232.1 Olea europaea HOM05D007602 ORTHO05D009086 1.7e-09 65.9 35 82.9
Carub.0001s3861 Capsella rubella HOM05D007602 ORTHO05D009086 2.2e-09 65.5 34 82.4
Duzib132G1115 Durio zibethinus HOM05D007602 ORTHO05D009086 2.2e-09 65.5 35 80.0
Lalb_Chr01g0002891 Lupinus albus HOM05D007602 ORTHO05D009086 2.2e-09 65.5 35 80.0
AT1G49410 Arabidopsis thaliana HOM05D007602 ORTHO05D009086 2.9e-09 65.1 34 82.4
Cfa004963 Carpinus fangiana HOM05D007602 ORTHO05D009086 2.9e-09 65.1 35 80.0
ClCG09G017780 Citrullus lanatus HOM05D007602 ORTHO05D009086 2.9e-09 65.1 35 80.0
Haze_02438 Corylus avellana HOM05D007602 ORTHO05D009086 2.9e-09 65.1 35 80.0
Migut.B00282 Erythranthe guttata HOM05D007602 ORTHO05D009086 2.9e-09 65.1 35 80.0
Sed0020423 Sechium edule HOM05D007602 ORTHO05D009086 2.9e-09 65.1 35 80.0
Aa31LG10G4570 Aethionema arabicum HOM05D007602 ORTHO05D009086 3.7e-09 64.7 36 80.6
Glyma.11G122300 Glycine max HOM05D007602 ORTHO05D009086 3.7e-09 64.7 35 80.0
Gorai.004G104500 Gossypium raimondii HOM05D007602 ORTHO05D009086 3.7e-09 64.7 33 84.8
Phvul.011G049200 Phaseolus vulgaris HOM05D007602 ORTHO05D009086 3.7e-09 64.7 35 80.0
PGR042G2915 Punica granatum HOM05D007602 ORTHO05D009086 3.7e-09 64.7 35 80.0
Gohir.D04G174300 Gossypium hirsutum HOM05D007602 ORTHO05D009086 4.9e-09 64.3 35 80.0
unitig_21.g20769 Utricularia gibba HOM05D007602 ORTHO05D009086 4.9e-09 64.3 34 82.4
AL1G56570 Arabidopsis lyrata HOM05D007602 ORTHO05D009086 6.4e-09 63.9 34 79.4
SGA_v2.0_scaffold32G13134 Striga asiatica HOM05D000790 ORTHO05D000769 6.4e-09 63.9 35 77.1
CiPaw.05G059500 Carya illinoinensis HOM05D007602 ORTHO05D009086 8.3e-09 63.5 35 77.1
Potri.004G149200 Populus trichocarpa HOM05D007602 ORTHO05D009086 8.3e-09 63.5 35 77.1
Sabra04G0099200 Salix brachista HOM05D007602 ORTHO05D009086 8.3e-09 63.5 35 77.1
Sed0019655 Sechium edule HOM05D007602 ORTHO05D009086 1.1e-08 63.2 35 77.1
Thecc.02G030000 Theobroma cacao HOM05D007602 ORTHO05D009086 1.4e-08 62.8 35 77.1
CARHR039420 Cardamine hirsuta HOM05D007602 ORTHO05D009086 1.9e-08 62.4 35 74.3
Duzib248G0323 Durio zibethinus HOM05D007602 ORTHO05D009086 2.4e-08 62.0 35 77.1
Duzib248G0595 Durio zibethinus HOM05D007602 ORTHO05D009086 2.4e-08 62.0 35 77.1
Duzib248G1495 Durio zibethinus HOM05D007602 ORTHO05D009086 2.4e-08 62.0 35 77.1
Potri.009G110100 Populus trichocarpa HOM05D007602 ORTHO05D009086 2.4e-08 62.0 35 74.3
THA.LOC104798806 Tarenaya hassleriana HOM05D007602 ORTHO05D009086 2.4e-08 62.0 34 79.4
THA.LOC104808449 Tarenaya hassleriana HOM05D007602 ORTHO05D009086 2.4e-08 62.0 34 79.4
BcaB02g11073 Brassica carinata HOM05D007602 ORTHO05D009086 3.2e-08 61.6 34 76.5
Thhalv10011932m.g Eutrema salsugineum HOM05D007602 ORTHO05D009086 3.2e-08 61.6 34 79.4
Lsat_1_v5_gn_9_109200 Lactuca sativa HOM05D007602 ORTHO05D009086 3.2e-08 61.6 35 74.3
Psat7g206800 Pisum sativum HOM05D007602 ORTHO05D009086 4.1e-08 61.2 40 72.5
BcaB04g17343 Brassica carinata HOM05D007602 ORTHO05D009086 7.1e-08 60.5 34 76.5
Glyma.12G082000 Glycine max HOM05D007602 ORTHO05D009086 9.2e-08 60.1 35 74.3
Hma1.2p1_0584F.1_g183350 Hydrangea macrophylla HOM05D007602 ORTHO05D009086 9.2e-08 60.1 35 71.4
Prupe.8G107900 Prunus persica HOM05D007602 ORTHO05D009086 9.2e-08 60.1 34 73.5
Atru.chr12.1346 Acer truncatum HOM05D007602 ORTHO05D009086 1.6e-07 59.3 35 74.3
CSS0038117 Camellia sinensis var. sinensis HOM05D007602 ORTHO05D009086 1.6e-07 59.3 35 68.6
CSS0032371 Camellia sinensis var. sinensis HOM05D007602 ORTHO05D009086 2.7e-07 58.5 37 67.6
RcHm_v2.0_Chr6g0262021 Rosa chinensis HOM05D007602 ORTHO05D009086 2.7e-07 58.5 35 71.4
SHI05446 Sapria himalayana HOM05D007602 ORTHO05D009086 2.7e-07 58.5 34 73.5
TWI31G0092 Tripterygium wilfordii HOM05D007602 ORTHO05D009086 2.7e-07 58.5 35 74.3
A08p03960 Brassica napus HOM05D007602 ORTHO05D009086 3.5e-07 58.2 34 76.5
Hma1.2p1_1353F.1_g277670 Hydrangea macrophylla HOM05D007602 ORTHO05D009086 3.5e-07 58.2 35 71.4
Hma1.2p1_2724F.1_g327525 Hydrangea macrophylla HOM05D007602 ORTHO05D009086 3.5e-07 58.2 35 71.4
FAN20G1774 Fragaria x ananassa HOM05D007602 ORTHO05D009086 4.6e-07 57.8 35 68.6
vmacro19447 Vaccinium macrocarpon HOM05D007602 ORTHO05D009086 4.6e-07 57.8 33 75.8
VMungo1127G0479 Vigna mungo HOM05D007602 ORTHO05D009086 7.8e-07 57.0 31 80.6
Lj5E203T0 Lonicera japonica HOM05D007602 ORTHO05D009086 1.3e-06 56.2 35 68.6
Nn5g29445 Nelumbo nucifera HOM05D007602 ORTHO05D009086 2.3e-06 55.5 34 76.5
Nn6g32178 Nelumbo nucifera HOM05D007602 ORTHO05D009086 2.3e-06 55.5 35 71.4
vmacro23386 Vaccinium macrocarpon HOM05D007602 ORTHO05D009086 2.3e-06 55.5 33 69.7
ECA240G4508 Erigeron canadensis HOM05D007602 ORTHO05D009086 6.6e-06 53.9 32 75.0


User provided reference genes

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