Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003810g0070 Nicotiana tabacum HOM05D011002 ORTHO05D022887 1.4e-27 125.6 62 100.0
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-19 97.8 56 82.1
Nitab4.5_0003397g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.0e-15 85.1 51 80.4
Nitab4.5_0001123g0050 Nicotiana tabacum HOM05D011002 ORTHO05D000006 2.7e-15 84.7 56 73.2
Nitab4.5_0000082g0230 Nicotiana tabacum HOM05D011002 ORTHO05D000006 2.5e-13 78.2 54 66.7
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-13 77.8 46 78.3
Nitab4.5_0027927g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.3e-13 77.8 57 63.2
Nitab4.5_0000457g0450 Nicotiana tabacum HOM05D008844 ORTHO05D000006 9.5e-13 76.3 56 60.7
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.2e-12 75.9 56 60.7
Nitab4.5_0001660g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.6e-12 74.3 56 60.7
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-11 72.8 54 64.8
Nitab4.5_0000031g0300 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.4e-11 72.4 54 59.3
Nitab4.5_0000540g0160 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.8e-11 72.0 56 58.9
Nitab4.5_0001987g0040 Nicotiana tabacum HOM05D011002 ORTHO05D000006 1.8e-11 72.0 46 71.7
Nitab4.5_0007450g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.1e-11 71.2 52 61.5
Nitab4.5_0001158g0070 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.0e-11 70.9 56 57.1
Nitab4.5_0005859g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 5.2e-11 70.5 56 57.1
Nitab4.5_0001676g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.0e-10 68.6 56 57.1
Nitab4.5_0001027g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.4e-10 67.4 53 60.4
Nitab4.5_0000396g0200 Nicotiana tabacum HOM05D011951 ORTHO05D000006 5.8e-10 67.0 56 55.4
Nitab4.5_0000541g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 7.5e-10 66.6 56 57.1
Nitab4.5_0005413g0080 Nicotiana tabacum HOM05D008844 ORTHO05D000006 9.8e-10 66.2 55 56.4
Nitab4.5_0001790g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-09 64.7 46 67.4
Nitab4.5_0000370g0070 Nicotiana tabacum HOM05D012219 ORTHO05D000006 4.9e-09 63.9 50 62.0
Nitab4.5_0003601g0040 Nicotiana tabacum HOM05D008844 ORTHO05D000006 8.3e-09 63.2 56 51.8
Nitab4.5_0006324g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 8.3e-09 63.2 43 72.1
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-08 62.8 55 47.3
Nitab4.5_0000164g0060 Nicotiana tabacum HOM05D000024 ORTHO05D283039 1.1e-08 62.8 41 73.2
Nitab4.5_0002108g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-08 62.8 47 61.7
Nitab4.5_0000914g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.4e-08 62.4 57 45.6
Nitab4.5_0000539g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.9e-08 62.0 50 56.0
Nitab4.5_0001569g0210 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.9e-08 62.0 51 54.9
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.2e-08 59.7 56 48.2
SHI22798 Sapria himalayana HOM05D000024 ORTHO05D000006 9.2e-08 59.7 57 45.6
SHI28657 Sapria himalayana HOM05D000024 ORTHO05D000006 9.2e-08 59.7 57 45.6
SHI48200 Sapria himalayana HOM05D000024 ORTHO05D000006 9.2e-08 59.7 57 45.6
Nitab4.5_0001287g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 59.3 51 60.8
Nitab4.5_0003605g0080 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.2e-07 59.3 56 46.4
Nitab4.5_0005334g0060 Nicotiana tabacum HOM05D012219 ORTHO05D000006 1.2e-07 59.3 42 64.3
SHI21937 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-07 59.3 57 45.6
SHI36499 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-07 59.3 57 45.6
Nitab4.5_0002591g0070 Nicotiana tabacum HOM05D011002 ORTHO05D000006 1.6e-07 58.9 46 56.5
Nitab4.5_0028335g0010 Nicotiana tabacum HOM05D045504 ORTHO05D000006 1.6e-07 58.9 55 52.7
SHI35886 Sapria himalayana HOM05D000024 ORTHO05D000006 1.6e-07 58.9 57 45.6
SHI47861 Sapria himalayana HOM05D000024 ORTHO05D000006 2.1e-07 58.5 56 46.4
SHI21776 Sapria himalayana HOM05D000024 ORTHO05D000006 2.7e-07 58.2 55 41.8
Nitab4.5_0002590g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.5e-07 57.8 49 55.1
SHI45778 Sapria himalayana HOM05D000024 ORTHO05D000006 3.5e-07 57.8 57 45.6
SHI49279 Sapria himalayana HOM05D000024 ORTHO05D000006 3.5e-07 57.8 57 45.6
SHI24107 Sapria himalayana HOM05D000024 ORTHO05D000006 4.6e-07 57.4 57 45.6
SHI34493 Sapria himalayana HOM05D000024 ORTHO05D000006 4.6e-07 57.4 56 46.4
Nitab4.5_0000431g0190 Nicotiana tabacum HOM05D012387 ORTHO05D000006 6.0e-07 57.0 57 40.4
SHI17587 Sapria himalayana HOM05D000024 ORTHO05D000006 6.0e-07 57.0 52 40.4
SHI28045 Sapria himalayana HOM05D000024 ORTHO05D000006 6.0e-07 57.0 56 46.4
SHI38431 Sapria himalayana HOM05D000024 ORTHO05D022887 6.0e-07 57.0 60 40.0
Nitab4.5_0002697g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 7.8e-07 56.6 50 52.0
SHI33731 Sapria himalayana HOM05D000024 ORTHO05D000006 7.8e-07 56.6 57 40.4
Nitab4.5_0000832g0100 Nicotiana tabacum HOM05D026524 ORTHO05D000006 1.0e-06 56.2 48 56.2
SHI25439 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-06 56.2 57 42.1
SHI39165 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-06 56.2 57 40.4
Nitab4.5_0005100g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.3e-06 55.8 56 46.4
Peaxi162Scf01188g00002 Petunia axillaris HOM05D008844 ORTHO05D000006 1.3e-06 55.8 55 52.7
SHI14849 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-06 55.8 52 44.2
SHI34322 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-06 55.8 57 42.1
SHI47252 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-06 55.8 61 34.4
Nitab4.5_0002737g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.7e-06 55.5 45 55.6
SHI23647 Sapria himalayana HOM05D000024 ORTHO05D000006 1.7e-06 55.5 53 47.2
SHI48575 Sapria himalayana HOM05D000024 ORTHO05D000006 1.7e-06 55.5 53 45.3
Nitab4.5_0002004g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 55.1 47 53.2
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 55.1 49 53.1
SHI24128 Sapria himalayana HOM05D000024 ORTHO05D000006 2.3e-06 55.1 57 40.4
SHI46723 Sapria himalayana HOM05D000024 ORTHO05D000006 2.3e-06 55.1 57 38.6
SHI49286 Sapria himalayana HOM05D000024 ORTHO05D000007 2.3e-06 55.1 57 33.3
Nitab4.5_0000379g0060 Nicotiana tabacum HOM05D011002 ORTHO05D283817 3.0e-06 54.7 39 66.7
SHI16624 Sapria himalayana HOM05D000024 ORTHO05D000006 3.0e-06 54.7 57 33.3
SHI42169 Sapria himalayana HOM05D000024 ORTHO05D000006 3.0e-06 54.7 53 45.3
SHI33883 Sapria himalayana HOM05D000024 ORTHO05D000006 3.9e-06 54.3 53 41.5
SHI46359 Sapria himalayana HOM05D000024 ORTHO05D000006 3.9e-06 54.3 53 41.5
Thecc.08G000100 Theobroma cacao HOM05D000024 ORTHO05D000006 3.9e-06 54.3 57 40.4
SHI15990 Sapria himalayana HOM05D000024 ORTHO05D000006 5.1e-06 53.9 53 35.8
SHI20394 Sapria himalayana HOM05D000024 ORTHO05D000006 5.1e-06 53.9 57 36.8
SHI30898 Sapria himalayana HOM05D000024 ORTHO05D000006 5.1e-06 53.9 54 35.2
SHI36683 Sapria himalayana HOM05D000024 ORTHO05D000006 5.1e-06 53.9 56 44.6
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-06 53.5 46 58.7
SHI24669 Sapria himalayana HOM05D000024 ORTHO05D000006 6.6e-06 53.5 56 41.1
SHI34352 Sapria himalayana HOM05D000024 ORTHO05D000006 6.6e-06 53.5 52 34.6
SHI34714 Sapria himalayana HOM05D000024 ORTHO05D000006 6.6e-06 53.5 57 33.3
SHI37215 Sapria himalayana HOM05D000024 ORTHO05D000006 6.6e-06 53.5 53 39.6
SHI48005 Sapria himalayana HOM05D000024 ORTHO05D000006 6.6e-06 53.5 57 36.8
SHI48259 Sapria himalayana HOM05D000024 ORTHO05D000006 6.6e-06 53.5 54 38.9
SHI49069 Sapria himalayana HOM05D000024 ORTHO05D000006 6.6e-06 53.5 54 37.0
SHI29951 Sapria himalayana HOM05D000024 ORTHO05D000006 8.6e-06 53.1 57 31.6
SHI35495 Sapria himalayana HOM05D000024 ORTHO05D000006 8.6e-06 53.1 54 37.0
SHI49513 Sapria himalayana HOM05D000024 ORTHO05D000006 8.6e-06 53.1 57 31.6
SHI53870 Sapria himalayana HOM05D000024 ORTHO05D000006 8.6e-06 53.1 54 40.7


User provided reference genes

Program Settings