Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003806g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.8e-115 417.5 206 100.0
Nitab4.5_0013472g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.1e-48 196.4 208 57.7
Nitab4.5_0005441g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-45 186.4 139 69.1
Nitab4.5_0000068g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-43 179.9 287 43.6
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-42 177.2 333 39.6
Nitab4.5_0000332g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-38 162.2 276 42.0
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.5e-33 146.4 330 34.5
Nitab4.5_0001339g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-31 140.2 147 54.4
Nitab4.5_0009292g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.4e-30 136.0 111 64.0
Nitab4.5_0004364g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.7e-29 132.5 231 39.4
Nitab4.5_0000775g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.4e-28 128.6 75 81.3
Nitab4.5_0001843g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.8e-27 124.8 75 80.0
Nitab4.5_0000643g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-26 124.4 75 76.0
Nitab4.5_0001634g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.0e-26 124.4 75 77.3
Nitab4.5_0002540g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.5e-25 117.9 223 39.0
Nitab4.5_0007526g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-24 117.1 275 36.0
Nitab4.5_0003273g0050 Nicotiana tabacum HOM05D004926 ORTHO05D001422 2.1e-24 116.7 130 55.4
Nitab4.5_0000073g0430 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.7e-24 115.5 75 76.0
Nitab4.5_0001843g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-23 114.0 75 74.7
Nitab4.5_0001338g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.8e-23 111.7 92 65.2
Nitab4.5_0000007g0280 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.1e-20 102.4 203 39.4
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.5e-19 99.4 71 74.6
Nitab4.5_0002664g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.6e-19 99.0 71 74.6
Nitab4.5_0003230g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.0e-19 98.6 71 74.6
Nitab4.5_0002542g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-18 97.4 52 88.5
Nitab4.5_0005446g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-18 97.1 55 89.1
Nitab4.5_0000046g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-18 96.3 71 71.8
Nitab4.5_0000058g0340 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-18 96.3 64 78.1
Nitab4.5_0005729g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-18 96.3 64 78.1
Nitab4.5_0000132g0330 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.0e-18 95.5 54 90.7
Nitab4.5_0000324g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.0e-18 95.5 67 76.1
Nitab4.5_0000326g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-17 94.0 64 75.0
Nitab4.5_0001832g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-17 94.0 54 88.9
Nitab4.5_0001299g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.9e-17 93.6 54 88.9
Nitab4.5_0000157g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.5e-17 93.2 64 75.0
Nitab4.5_0009292g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.5e-17 93.2 62 77.4
Nitab4.5_0000030g0240 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.3e-17 92.8 54 87.0
Nitab4.5_0001392g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.3e-17 92.4 64 73.4
Nitab4.5_0013196g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.3e-17 91.7 56 82.1
Nitab4.5_0002765g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.5e-17 91.3 64 73.4
Nitab4.5_0028204g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.5e-17 91.3 71 69.0
Nitab4.5_0010041g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-16 90.5 64 73.4
Nitab4.5_0000599g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-16 89.4 54 85.2
Nitab4.5_0002740g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-16 89.4 55 83.6
Nitab4.5_0000727g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.7e-16 89.0 71 69.0
Nitab4.5_0003000g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-15 87.8 56 80.4
Nitab4.5_0000068g0500 Nicotiana tabacum HOM05D004926 ORTHO05D283769 1.4e-15 87.4 82 56.1
Nitab4.5_0004541g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-15 87.4 64 73.4
Nitab4.5_0002045g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-15 87.0 71 67.6
Nitab4.5_0002542g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-15 87.0 56 80.4
Nitab4.5_0001574g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.0e-15 85.9 71 66.2
Nitab4.5_0007680g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.2e-15 85.5 54 83.3
Nitab4.5_0022418g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.8e-15 85.1 53 83.0
Sopen03g011910 Solanum pennellii HOM05D008695 ORTHO05D001422 1.2e-14 84.3 218 29.8
Nitab4.5_0020898g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-14 84.0 54 77.8
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 1.5e-14 84.0 75 54.7
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 1.5e-14 84.0 75 54.7
PGSC0003DMG400022101 Solanum tuberosum HOM05D008695 ORTHO05D001422 1.5e-14 84.0 75 57.3
Nitab4.5_0000462g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-14 83.6 338 28.4
Nitab4.5_0000068g0360 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-14 83.2 64 70.3
Nitab4.5_0000524g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.4e-14 82.8 71 63.4
Nitab4.5_0006206g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-14 82.4 72 65.3
Sopen07g015290 Solanum pennellii HOM05D008695 ORTHO05D001422 5.8e-14 82.0 195 29.2
Sopen09g007730 Solanum pennellii HOM05D008695 ORTHO05D001422 7.5e-14 81.6 75 52.0
Nitab4.5_0000754g0320 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-13 80.1 54 77.8
Nitab4.5_0000926g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.7e-13 79.3 42 85.7
Nitab4.5_0003692g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.7e-13 79.3 51 80.4
Nitab4.5_0000035g0160 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.9e-13 79.0 54 77.8
Nitab4.5_0005061g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.4e-12 77.4 73 50.7
Sopen01g020530 Solanum pennellii HOM05D000047 ORTHO05D000044 1.9e-12 77.0 211 28.9
Sopen07g013820 Solanum pennellii HOM05D000047 ORTHO05D001422 2.4e-12 76.6 134 35.1
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.2e-12 76.3 73 50.7
Sopen01g017450 Solanum pennellii HOM05D002047 ORTHO05D001422 5.4e-12 75.5 77 49.4
Sopen07g016250 Solanum pennellii HOM05D002047 ORTHO05D001422 5.4e-12 75.5 79 46.8
Sopen03g015690 Solanum pennellii HOM05D008695 ORTHO05D001422 7.0e-12 75.1 75 48.0
Sopen04g017310 Solanum pennellii HOM05D008695 ORTHO05D001422 7.0e-12 75.1 207 30.4
Nitab4.5_0000235g0070 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.2e-11 74.3 73 49.3
Nitab4.5_0004532g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-11 73.9 60 68.3
Nitab4.5_0000593g0250 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-11 73.6 45 84.4
Sopen05g014240 Solanum pennellii HOM05D000014 ORTHO05D000016 2.0e-11 73.6 77 48.1
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 2.7e-11 73.2 75 50.7
Nitab4.5_0007424g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.5e-11 72.8 73 49.3
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 3.5e-11 72.8 73 50.7
PGSC0003DMG400016492 Solanum tuberosum HOM05D002047 ORTHO05D001422 4.6e-11 72.4 78 46.2
Nitab4.5_0000274g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.8e-11 71.6 66 60.6
Nitab4.5_0010449g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.8e-11 71.6 52 71.2
Sopen09g018960 Solanum pennellii HOM05D002047 ORTHO05D001422 7.8e-11 71.6 79 45.6
Nitab4.5_0024891g0020 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.0e-10 71.2 73 47.9
Sopen06g009860 Solanum pennellii HOM05D002047 ORTHO05D001422 1.0e-10 71.2 75 48.0
Sopen01g005990 Solanum pennellii HOM05D002047 ORTHO05D001422 1.3e-10 70.9 79 45.6
Nitab4.5_0000308g0170 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-10 70.5 47 76.6
Nitab4.5_0000522g0120 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.7e-10 70.5 73 47.9
Sopen01g005980 Solanum pennellii HOM05D002047 ORTHO05D001422 1.7e-10 70.5 79 45.6
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 1.7e-10 70.5 75 49.3
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.7e-10 70.5 73 49.3
Sopen08g011480 Solanum pennellii HOM05D008695 ORTHO05D001422 1.7e-10 70.5 75 44.0
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 1.7e-10 70.5 73 49.3
Sopen12g021080 Solanum pennellii HOM05D000047 ORTHO05D001422 1.7e-10 70.5 75 46.7
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 3.0e-10 69.7 73 47.9
Sopen01g017700 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-10 68.9 75 45.3
Sopen11g019410 Solanum pennellii HOM05D002047 ORTHO05D001422 6.6e-10 68.6 74 50.0
Sopen09g022070 Solanum pennellii HOM05D000047 ORTHO05D001422 8.6e-10 68.2 73 49.3
Nitab4.5_0001228g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-09 67.8 56 66.1
Sopen02g002190 Solanum pennellii HOM05D002047 ORTHO05D001422 1.1e-09 67.8 74 50.0
Sopen02g007640 Solanum pennellii HOM05D002047 ORTHO05D001422 1.1e-09 67.8 74 50.0
Sopen05g014510 Solanum pennellii HOM05D002047 ORTHO05D001422 1.1e-09 67.8 75 49.3
Sopen00g005910 Solanum pennellii HOM05D002047 ORTHO05D001422 1.5e-09 67.4 79 44.3
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 1.5e-09 67.4 73 47.9
Nitab4.5_0004762g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.9e-09 67.0 46 73.9
Sopen07g017300 Solanum pennellii HOM05D008695 ORTHO05D001422 1.9e-09 67.0 118 33.1
Nitab4.5_0001955g0130 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.3e-09 66.2 66 47.0
Nitab4.5_0000235g0080 Nicotiana tabacum HOM05D008440 ORTHO05D001422 5.6e-09 65.5 66 47.0
Sopen12g015700 Solanum pennellii HOM05D008695 ORTHO05D001422 5.6e-09 65.5 73 46.6
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 9.5e-09 64.7 73 46.6
Sopen05g013180 Solanum pennellii HOM05D002047 ORTHO05D001422 9.5e-09 64.7 74 47.3
Sopen01g006870 Solanum pennellii HOM05D002047 ORTHO05D001422 1.2e-08 64.3 79 43.0
Nitab4.5_0000902g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-08 63.9 65 55.4
Sopen04g022160 Solanum pennellii HOM05D002047 ORTHO05D001422 1.6e-08 63.9 70 48.6
Sopen08g007700 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-08 63.9 75 44.0
Sopen01g017210 Solanum pennellii HOM05D000047 ORTHO05D001422 2.8e-08 63.2 175 28.0
Sopen01g024730 Solanum pennellii HOM05D002047 ORTHO05D001422 2.8e-08 63.2 79 41.8
Nitab4.5_0001124g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-08 62.8 42 76.2
Sopen11g020140 Solanum pennellii HOM05D002047 ORTHO05D001422 3.6e-08 62.8 74 45.9
Nitab4.5_0000002g0420 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.7e-08 62.4 52 65.4
Sopen07g011120 Solanum pennellii HOM05D002047 ORTHO05D001422 4.7e-08 62.4 79 41.8
Nitab4.5_0003555g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.2e-08 62.0 36 83.3
Nitab4.5_0022423g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.2e-08 62.0 36 83.3
Sopen11g013600 Solanum pennellii HOM05D008695 ORTHO05D001422 8.1e-08 61.6 66 47.0
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 8.1e-08 61.6 66 47.0
Sopen04g013010 Solanum pennellii HOM05D008695 ORTHO05D001422 1.1e-07 61.2 66 47.0
Nitab4.5_0000372g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-07 60.5 43 74.4
Nitab4.5_0000068g0510 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.3e-07 60.1 36 80.6
Nitab4.5_0008253g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.3e-07 60.1 79 40.5
Sopen04g020150 Solanum pennellii HOM05D002047 ORTHO05D001422 2.3e-07 60.1 66 48.5
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 2.3e-07 60.1 66 45.5
Nitab4.5_0006110g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.1e-07 59.7 155 28.4
Nitab4.5_0000271g0150 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.0e-07 59.3 36 80.6
Sopen11g018120 Solanum pennellii HOM05D008695 ORTHO05D001422 5.2e-07 58.9 66 47.0
Nitab4.5_0005138g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.9e-07 58.2 36 80.6
Nitab4.5_0009292g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.9e-07 58.2 36 80.6
Nitab4.5_0001124g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.2e-06 57.8 36 83.3
Nitab4.5_0011907g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.2e-06 57.8 79 40.5
Sopen01g024270 Solanum pennellii HOM05D002047 ORTHO05D001422 2.0e-06 57.0 76 42.1
Sopen01g024350 Solanum pennellii HOM05D000004 ORTHO05D001422 2.0e-06 57.0 79 39.2
Nitab4.5_0011685g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-06 56.6 36 77.8
Sopen01g041930 Solanum pennellii HOM05D007487 ORTHO05D008561 3.4e-06 56.2 84 44.0
CAN.G574.11 Capsicum annuum HOM05D000265 ORTHO05D001422 4.4e-06 55.8 79 38.0
Nitab4.5_0005662g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.5e-06 55.1 36 75.0
Nitab4.5_0001116g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.9e-06 54.7 79 38.0
Nitab4.5_0004122g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.9e-06 54.7 28 92.9


User provided reference genes

Program Settings