Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 5.1e-174 614.4 323 100.0
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 2.2e-153 545.8 323 90.4
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 8.4e-153 543.9 323 89.2
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 7.1e-152 540.8 324 88.9
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 2.1e-151 539.3 324 88.9
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 3.2e-144 515.4 324 84.6
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.2e-130 470.3 320 75.9
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 8.7e-126 454.1 321 75.4
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 2.8e-124 449.1 320 73.8
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.1e-123 447.2 323 74.9
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 1.4e-123 446.8 320 71.6
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 2.0e-122 443.0 321 72.9
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 1.1e-120 437.2 320 71.2
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 2.1e-119 433.0 312 75.0
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 2.1e-119 433.0 319 72.4
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 4.6e-119 431.8 320 70.9
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 2.3e-118 429.5 320 70.6
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 2.0e-117 426.4 320 70.9
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 5.7e-117 424.9 327 70.3
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 7.4e-117 424.5 323 70.6
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 2.2e-116 422.9 326 70.9
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 1.1e-115 420.6 334 68.0
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 6.9e-115 417.9 320 70.9
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 9.1e-115 417.5 221 99.1
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.2e-114 417.2 324 70.7
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 1.2e-114 417.2 320 69.1
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 1.5e-114 416.8 319 71.5
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 4.5e-114 415.2 322 71.1
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 7.7e-114 414.5 321 69.2
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.3e-113 413.7 322 69.6
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.2e-113 412.9 324 69.8
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 3.8e-113 412.1 320 70.3
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 1.1e-112 410.6 325 68.0
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 1.4e-112 410.2 321 69.8
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 3.2e-112 409.1 324 67.9
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 3.2e-112 409.1 327 69.4
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 4.2e-112 408.7 324 69.1
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 1.2e-111 407.1 321 67.6
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.6e-111 406.8 328 68.3
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.1e-111 406.4 332 68.1
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 2.1e-111 406.4 343 65.9
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 3.6e-111 405.6 323 68.4
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 4.7e-111 405.2 332 65.7
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 1.8e-110 403.3 321 66.7
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 3.0e-110 402.5 320 67.2
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 3.9e-110 402.1 326 66.6
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 1.1e-109 400.6 331 65.9
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 1.5e-109 400.2 325 67.1
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.6e-109 399.4 320 66.6
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.6e-109 399.4 352 63.1
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 3.3e-109 399.1 320 66.6
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 4.4e-109 398.7 324 66.7
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 4.4e-109 398.7 328 65.9
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 5.7e-109 398.3 334 65.0
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 5.7e-109 398.3 323 66.9
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 7.4e-109 397.9 275 75.3
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 1.3e-108 397.1 266 76.7
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 1.3e-108 397.1 320 68.1
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 8.2e-108 394.4 323 67.8
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 1.1e-107 394.0 308 68.5
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 4.1e-107 392.1 247 82.6
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 5.3e-107 391.7 322 66.1
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 2.6e-106 389.4 349 61.6
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 3.5e-106 389.0 287 71.1
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 4.5e-106 388.7 334 65.9
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 4.5e-106 388.7 300 69.0
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 7.7e-106 387.9 318 67.3
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 1.0e-105 387.5 287 70.4
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 2.9e-105 386.0 321 65.4
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 5.0e-105 385.2 287 71.8
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 8.5e-105 384.4 294 68.4
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 2.5e-104 382.9 319 66.8
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 1.2e-103 380.6 286 69.2
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 2.1e-103 379.8 320 65.0
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 2.1e-103 379.8 326 64.4
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 5.2e-102 375.2 248 77.8
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 6.7e-102 374.8 368 59.5
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 4.4e-101 372.1 290 69.0
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 4.4e-101 372.1 260 74.2
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 5.7e-101 371.7 328 60.7
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 7.5e-101 371.3 263 73.0
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 9.7e-101 370.9 321 61.1
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 4.8e-100 368.6 342 61.4
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 1.4e-99 367.1 332 61.1
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.4e-99 367.1 258 74.4
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 2.0e-98 363.2 234 79.9
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 5.9e-98 361.7 291 66.7
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 2.2e-97 359.8 234 79.1
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 5.0e-97 358.6 328 59.5
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 4.8e-92 342.0 253 69.6
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 6.3e-92 341.7 319 59.2
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 5.4e-91 338.6 248 69.4
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.7e-89 333.6 331 58.9
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 2.0e-85 320.1 218 76.6
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 9.2e-83 311.2 253 66.8
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.7e-76 290.4 228 68.9
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 8.3e-76 288.1 214 67.3
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 1.8e-75 287.0 232 63.8
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 3.2e-75 286.2 188 75.5
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 5.6e-72 275.4 258 53.1
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 8.0e-71 271.6 260 53.8
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 4.4e-69 265.8 259 59.5
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 5.8e-69 265.4 258 52.3
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 8.9e-62 241.5 248 52.4
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.0e-61 240.4 262 47.3
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.9e-60 235.7 250 49.2
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.4e-59 234.2 253 49.8
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.5e-58 229.6 252 48.0
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 4.6e-50 202.6 251 43.4
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 9.0e-46 188.3 127 75.6
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 7.8e-42 175.3 248 41.5
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 7.8e-42 175.3 164 62.8
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 2.8e-39 166.8 125 70.4
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 1.1e-38 164.9 246 37.0
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 1.5e-37 161.0 317 40.1
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 9.6e-24 115.2 86 70.9
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 2.8e-23 113.6 244 29.9
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 5.3e-22 109.4 270 33.0
Actinidia30278 Actinidia chinensis HOM05D005233 ORTHO05D006308 5.1e-09 66.2 69 62.3
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 1.4e-06 58.2 30 96.7
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 9.1e-06 55.5 52 48.1


User provided reference genes

Program Settings