Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 0.0e+00 1295.8 663 100.0
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 0.0e+00 1243.8 665 96.5
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 2.7e-307 1058.1 665 83.9
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 4.8e-304 1047.3 676 82.1
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 1.9e-300 1035.4 665 82.4
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 4.2e-300 1034.2 665 82.6
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 2.2e-285 985.3 676 79.1
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 6.4e-232 807.7 643 65.8
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 1.1e-228 797.0 665 62.7
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 1.4e-223 780.0 684 62.3
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 9.0e-218 760.8 668 59.6
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 4.9e-216 755.0 663 61.2
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 3.5e-214 748.8 666 60.4
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 1.0e-213 747.3 665 60.3
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 2.3e-213 746.1 604 64.4
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 5.1e-213 745.0 675 58.5
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 5.1e-213 745.0 677 58.8
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 1.1e-212 743.8 673 57.8
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 3.3e-212 742.3 664 60.5
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 1.6e-211 740.0 673 58.2
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 6.2e-211 738.0 683 57.0
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 6.2e-211 738.0 665 59.4
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 8.1e-211 737.6 602 64.1
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 1.4e-210 736.9 666 58.9
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 2.4e-210 736.1 670 58.4
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 3.1e-210 735.7 604 64.1
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 1.2e-209 733.8 602 63.6
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 4.5e-209 731.9 665 60.2
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 1.7e-208 729.9 693 58.6
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 8.4e-208 727.6 667 59.1
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 3.2e-207 725.7 607 63.8
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 4.2e-207 725.3 666 57.5
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 7.1e-207 724.5 668 59.4
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 3.5e-206 722.2 666 58.9
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 3.5e-206 722.2 678 58.7
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 1.3e-205 720.3 668 58.5
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 1.3e-205 720.3 668 58.5
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 1.3e-205 720.3 664 59.2
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 2.3e-205 719.5 667 58.8
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 6.7e-205 718.0 606 63.0
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 9.6e-204 714.1 672 58.9
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 6.2e-203 711.4 671 58.4
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 1.1e-202 710.7 732 54.4
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 6.9e-202 708.0 599 61.4
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 6.9e-202 708.0 691 57.9
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 1.2e-201 707.2 659 57.5
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 1.5e-201 706.8 664 56.9
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 2.0e-201 706.4 662 58.9
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 2.0e-201 706.4 670 57.3
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 2.6e-201 706.1 663 57.8
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 7.6e-201 704.5 732 54.0
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 1.0e-200 704.1 663 57.6
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 1.0e-200 704.1 608 61.8
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 1.3e-200 703.7 610 61.6
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 1.3e-200 703.7 664 58.3
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 1.7e-200 703.4 666 56.8
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 2.2e-200 703.0 665 57.7
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 1.9e-199 699.9 674 56.7
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 3.2e-199 699.1 746 52.8
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 4.2e-199 698.7 554 66.2
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 5.5e-199 698.4 673 55.7
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 7.1e-199 698.0 609 61.2
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 2.7e-198 696.0 663 56.6
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 1.8e-197 693.3 669 57.2
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 1.1e-196 690.6 683 56.2
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 5.7e-196 688.3 665 57.4
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 7.4e-196 688.0 526 64.8
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 1.3e-195 687.2 666 55.4
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 6.9e-194 681.4 584 60.8
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 9.0e-194 681.0 666 56.5
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 1.3e-192 677.2 678 54.4
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 2.9e-192 676.0 656 55.9
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 1.2e-190 670.6 669 54.7
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 3.0e-189 666.0 608 58.1
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 2.5e-188 662.9 642 57.3
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 6.1e-182 641.7 627 57.1
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 1.8e-181 640.2 504 65.3
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 8.8e-181 637.9 681 54.2
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 1.1e-180 637.5 743 49.1
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 5.7e-180 635.2 683 52.4
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 2.8e-179 632.9 743 49.1
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 8.5e-176 621.3 619 54.8
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 9.4e-175 617.8 602 56.5
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 3.0e-173 612.8 443 70.9
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 7.4e-172 608.2 674 53.0
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 7.4e-172 608.2 606 56.3
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 2.2e-171 606.7 671 53.2
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 2.2e-171 606.7 673 52.6
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 8.2e-171 604.7 673 53.0
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 7.0e-170 601.7 669 52.2
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 3.5e-169 599.4 575 56.5
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 5.5e-167 592.0 541 57.3
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 2.1e-166 590.1 583 54.5
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 4.0e-165 585.9 666 50.3
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 6.7e-165 585.1 600 54.7
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 2.0e-164 583.6 608 53.5
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 1.8e-162 577.0 530 57.2
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 2.4e-162 576.6 666 50.5
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 7.0e-162 575.1 667 49.6
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 1.7e-160 570.5 665 49.0
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 1.7e-160 570.5 666 48.9
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 2.2e-160 570.1 532 56.2
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 8.5e-160 568.2 665 48.7
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 4.2e-159 565.8 668 50.1
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 5.5e-159 565.5 668 50.0
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 9.4e-159 564.7 600 53.0
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 9.4e-159 564.7 602 52.8
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 3.6e-158 562.8 600 52.8
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 1.4e-157 560.8 635 49.3
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 3.7e-155 552.7 670 47.9
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 5.9e-153 545.4 509 57.2
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 1.3e-152 544.3 645 50.2
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 3.2e-151 539.7 667 48.6
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 1.2e-150 537.7 676 48.4
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 1.6e-150 537.3 704 45.7
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 3.4e-148 529.6 546 50.2
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 5.7e-140 502.3 651 45.2
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 2.8e-134 483.4 579 48.5
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 2.3e-133 480.3 670 44.2
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 5.4e-122 442.6 644 41.0
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 3.0e-120 436.8 646 40.1
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 3.9e-120 436.4 643 44.6
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 3.1e-93 347.1 535 38.3
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 9.0e-93 345.5 563 36.2
C05p17770 Brassica napus HOM05D005308 ORTHO05D006494 2.1e-89 334.3 266 63.2
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 2.1e-89 334.3 535 37.2
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 1.1e-87 328.6 451 39.7
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 2.5e-87 327.4 317 54.9
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 2.1e-86 324.3 236 65.3
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 4.8e-86 323.2 411 41.1
unitig_0.g1436 Utricularia gibba HOM05D005308 ORTHO05D006494 1.5e-71 275.0 409 41.1
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 7.4e-71 272.7 217 64.1
unitig_0.g1437 Utricularia gibba HOM05D005308 ORTHO05D006494 1.7e-51 208.4 248 48.4
A07p29060 Brassica napus HOM05D005308 ORTHO05D006494 6.1e-49 199.9 127 75.6
MCO12G330 Micromonas commoda HOM05D005308 ORTHO05D006494 8.6e-19 99.8 553 23.1
SHI17314 Sapria himalayana HOM05D005308 ORTHO05D006494 3.4e-07 61.2 138 37.0
CBR_g49554 Chara braunii HOM05D005308 ORTHO05D006494 4.9e-06 57.4 164 28.0
BcaC07g37382 Brassica carinata HOM05D005308 ORTHO05D006494 6.4e-06 57.0 64 45.3


User provided reference genes

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