Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 0.0e+00 1446.0 747 100.0
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 0.0e+00 1330.9 756 91.5
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 1.2e-279 966.5 753 71.0
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 1.6e-271 939.5 766 70.4
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 3.9e-254 881.7 695 70.9
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 2.0e-234 816.2 695 67.6
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 3.7e-119 433.3 780 38.2
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 6.3e-103 379.4 829 36.6
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 1.7e-100 371.3 787 36.7
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 4.0e-97 360.1 796 35.3
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.5e-96 358.2 796 35.2
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 6.3e-95 352.8 807 34.0
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 6.3e-95 352.8 811 36.0
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 7.8e-93 345.9 793 34.7
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 2.3e-84 317.8 782 34.5
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 2.4e-78 297.7 836 31.3
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 3.0e-76 290.8 812 32.9
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.5e-75 288.5 794 31.7
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 1.8e-73 281.6 893 30.3
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 3.7e-71 273.9 819 31.4
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 4.9e-71 273.5 814 31.1
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 1.9e-70 271.6 762 31.6
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 4.1e-70 270.4 793 33.7
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 3.3e-67 260.8 888 29.6
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 7.3e-67 259.6 426 44.1
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 5.2e-65 253.4 985 27.8
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 2.2e-63 248.1 890 29.1
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 4.2e-62 243.8 931 29.4
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 4.2e-62 243.8 904 29.5
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 5.4e-62 243.4 286 50.7
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 1.7e-60 238.4 279 50.9
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 3.9e-60 237.3 876 29.3
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 1.1e-59 235.7 235 56.6
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.9e-59 235.0 871 29.4
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 7.3e-59 233.0 801 31.7
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 2.1e-58 231.5 815 30.8
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 4.8e-58 230.3 262 51.5
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.4e-57 228.8 842 30.2
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 2.4e-57 228.0 836 29.1
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 2.0e-56 224.9 773 31.6
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 1.3e-55 222.2 862 29.1
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 2.2e-55 221.5 779 31.2
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 4.9e-55 220.3 892 27.1
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 1.1e-54 219.2 827 28.5
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.1e-54 219.2 797 30.5
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 1.4e-54 218.8 739 29.9
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.6e-53 215.3 767 31.2
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 6.0e-53 213.4 507 33.5
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 1.0e-52 212.6 834 27.8
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 3.9e-52 210.7 773 30.0
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 4.3e-51 207.2 527 34.3
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 9.6e-51 206.1 434 37.3
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.0e-48 198.4 299 42.5
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 3.4e-48 197.6 783 28.0
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 5.8e-48 196.8 800 28.5
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 7.6e-48 196.4 484 34.9
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 2.9e-47 194.5 818 28.1
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 2.9e-47 194.5 775 28.3
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 3.2e-46 191.0 751 27.0
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.8e-44 185.3 422 33.4
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 2.3e-44 184.9 829 26.4
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 1.5e-43 182.2 811 27.6
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 4.3e-43 180.6 784 27.3
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 4.3e-43 180.6 774 29.2
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 5.6e-43 180.3 807 25.7
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 7.4e-43 179.9 320 37.2
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 7.4e-43 179.9 753 28.0
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 7.4e-43 179.9 274 42.3
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 9.6e-43 179.5 233 45.9
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 9.6e-43 179.5 315 38.1
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.4e-41 175.6 191 52.9
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 9.0e-41 172.9 810 27.0
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 1.5e-40 172.2 766 26.4
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 1.0e-39 169.5 531 31.1
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 2.2e-39 168.3 772 26.8
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 1.1e-38 166.0 758 26.5
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 1.9e-38 165.2 342 36.3
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 2.5e-38 164.9 434 33.4
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 4.2e-38 164.1 871 25.4
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 7.1e-38 163.3 375 36.3
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 7.1e-38 163.3 273 39.2
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 7.1e-38 163.3 282 39.0
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 2.1e-37 161.8 764 27.4
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 2.1e-37 161.8 825 27.0
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.0e-36 159.5 743 26.6
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 1.8e-36 158.7 821 26.1
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 1.8e-36 158.7 777 25.9
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 1.9e-35 155.2 763 25.8
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 7.4e-35 153.3 410 32.4
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 7.4e-35 153.3 757 27.6
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 1.1e-33 149.4 322 33.5
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 1.4e-33 149.1 359 34.0
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 1.4e-33 149.1 359 34.0
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 3.1e-33 147.9 377 34.2
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 3.1e-33 147.9 412 33.0
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 1.5e-32 145.6 361 33.5
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.6e-32 144.8 544 27.2
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.3e-31 142.5 185 45.9
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 1.6e-29 135.6 484 28.7
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 2.1e-29 135.2 753 24.8
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 2.1e-29 135.2 753 24.8
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 4.6e-29 134.0 372 33.1
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 3.0e-28 131.3 842 25.4
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 7.4e-27 126.7 334 33.2
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 9.7e-27 126.3 317 34.1
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 9.7e-27 126.3 652 26.7
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 9.7e-27 126.3 255 35.7
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 1.4e-25 122.5 132 52.3
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.4e-25 121.7 266 37.2
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.5e-24 119.0 372 32.5
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 1.5e-24 119.0 227 37.4
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.4e-22 112.5 654 26.5
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 2.5e-22 111.7 134 48.5
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 3.9e-20 104.4 302 30.8
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 5.3e-17 94.0 144 42.4
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 2.7e-13 81.6 333 27.0
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 9.7e-11 73.2 121 39.7
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 1.1e-09 69.7 130 36.9
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 5.9e-08 63.9 236 27.1
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 1.0e-07 63.2 129 34.9
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 1.3e-07 62.8 120 34.2
MBI11_g07400_MAGBIO Magnolia biondii HOM05D007138 ORTHO05D009148 2.5e-06 58.5 148 32.4


User provided reference genes

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