Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003782g0060 Nicotiana tabacum HOM05D004887 ORTHO05D006168 5.4e-187 657.5 337 100.0
Nitab4.5_0000610g0150 Nicotiana tabacum HOM05D004887 ORTHO05D006168 2.4e-179 632.1 357 92.7
Solyc11g073300.2 Solanum lycopersicum HOM05D004887 ORTHO05D006168 4.0e-174 614.8 358 89.7
Sopen11g030920 Solanum pennellii HOM05D004887 ORTHO05D006168 5.3e-174 614.4 358 89.4
CAN.G661.4 Capsicum annuum HOM05D004887 ORTHO05D006168 4.8e-167 591.3 357 86.3
Peaxi162Scf00406g00137 Petunia axillaris HOM05D004887 ORTHO05D006168 6.7e-161 570.9 357 84.0
Dinv32870 Davidia involucrata HOM05D004887 ORTHO05D006168 1.7e-151 539.7 357 77.6
Migut.D02114 Erythranthe guttata HOM05D004887 ORTHO05D006168 1.5e-149 533.1 357 76.5
Migut.G01105 Erythranthe guttata HOM05D004887 ORTHO05D006168 2.6e-149 532.3 354 76.8
Migut.G01142 Erythranthe guttata HOM05D004887 ORTHO05D006168 1.0e-148 530.4 354 76.6
DCAR_018895 Daucus carota HOM05D004887 ORTHO05D006168 2.9e-148 528.9 350 75.4
Hma1.2p1_0624F.1_g191380 Hydrangea macrophylla HOM05D004887 ORTHO05D006168 2.9e-148 528.9 357 77.3
COL.COLO4_18471 Corchorus olitorius HOM05D004887 ORTHO05D006168 1.1e-144 516.9 351 76.9
GSVIVG01025008001 Vitis vinifera HOM05D004887 ORTHO05D006168 3.3e-144 515.4 355 76.1
Cc01_g12500 Coffea canephora HOM05D004887 ORTHO05D006168 8.2e-143 510.8 349 75.9
Oeu041027.1 Olea europaea HOM05D004887 ORTHO05D006168 8.2e-143 510.8 357 73.9
PGR102G2111 Punica granatum HOM05D004887 ORTHO05D006168 7.0e-142 507.7 351 74.4
Cpa.g.sc190.13 Carica papaya HOM05D004887 ORTHO05D006168 1.2e-141 506.9 351 74.6
MD11G1143700 Malus domestica HOM05D004887 ORTHO05D006168 4.5e-141 505.0 351 74.6
Prupe.6G081500 Prunus persica HOM05D004887 ORTHO05D006168 7.7e-141 504.2 352 73.6
Glyma.11G141400 Glycine max HOM05D004887 ORTHO05D006168 8.5e-140 500.7 354 72.3
RcHm_v2.0_Chr5g0063631 Rosa chinensis HOM05D004887 ORTHO05D006168 8.5e-140 500.7 350 74.0
MD03G1097100 Malus domestica HOM05D004887 ORTHO05D006168 1.5e-139 500.0 351 74.1
Gohir.A03G039700 Gossypium hirsutum HOM05D004887 ORTHO05D006168 2.5e-139 499.2 351 74.1
MBI14_g18541_MAGBIO Magnolia biondii HOM05D004887 ORTHO05D006168 3.2e-139 498.8 357 73.9
Lalb_Chr01g0003761 Lupinus albus HOM05D004887 ORTHO05D006168 4.2e-139 498.4 353 73.1
Gohir.D03G128400 Gossypium hirsutum HOM05D004887 ORTHO05D006168 9.4e-139 497.3 351 73.8
Ciclev10028710m.g Citrus clementina HOM05D004887 ORTHO05D006168 1.2e-138 496.9 354 72.6
Potri.001G237000 Populus trichocarpa HOM05D004887 ORTHO05D006168 1.2e-138 496.9 347 74.4
FAN21G1310 Fragaria x ananassa HOM05D004887 ORTHO05D006168 1.6e-138 496.5 350 73.7
arahy.Tifrunner.gnm1.ann1.31UC9J Arachis hypogaea HOM05D004887 ORTHO05D006168 2.1e-138 496.1 351 71.8
Gorai.003G135100 Gossypium raimondii HOM05D004887 ORTHO05D006168 2.7e-138 495.7 351 73.5
FvH4_3g35470 Fragaria vesca HOM05D004887 ORTHO05D006168 3.6e-138 495.4 350 73.7
arahy.Tifrunner.gnm1.ann1.1V42NR Arachis hypogaea HOM05D004887 ORTHO05D006168 6.1e-138 494.6 351 71.5
Migut.N02667 Erythranthe guttata HOM05D004887 ORTHO05D006168 6.1e-138 494.6 353 72.2
CiPaw.13G097700 Carya illinoinensis HOM05D004887 ORTHO05D006168 1.4e-137 493.4 353 73.4
VMungo1127G0043 Vigna mungo HOM05D004887 ORTHO05D006168 1.8e-137 493.0 354 71.2
TAR369G0226 Trochodendron aralioides HOM05D004887 ORTHO05D006168 2.3e-137 492.7 354 72.3
Phvul.011G065900 Phaseolus vulgaris HOM05D004887 ORTHO05D006168 3.0e-137 492.3 354 71.2
Lj3g0008400 Lotus japonicus HOM05D004887 ORTHO05D006168 4.0e-137 491.9 354 71.8
TPR.G10217 Trifolium pratense HOM05D004887 ORTHO05D006168 5.2e-137 491.5 354 70.6
Hund18927 Selenicereus undatus HOM05D004887 ORTHO05D006168 6.7e-137 491.1 355 72.1
Duzib150G1309 Durio zibethinus HOM05D004887 ORTHO05D006168 1.5e-136 490.0 351 74.1
HanXRQChr04g0107001 Helianthus annuus HOM05D004887 ORTHO05D006168 4.4e-136 488.4 352 72.2
Thhalv10013947m.g Eutrema salsugineum HOM05D004887 ORTHO05D006168 5.7e-136 488.0 352 69.9
Actinidia37217 Actinidia chinensis HOM05D004887 ORTHO05D006168 9.7e-136 487.3 344 74.7
BcaB08g36206 Brassica carinata HOM05D004887 ORTHO05D006168 9.7e-136 487.3 352 69.3
AT5G59960 Arabidopsis thaliana HOM05D004887 ORTHO05D006168 1.3e-135 486.9 349 71.6
BcaC04g19652 Brassica carinata HOM05D004887 ORTHO05D006168 2.2e-135 486.1 352 69.3
C09p52470 Brassica napus HOM05D004887 ORTHO05D006168 2.2e-135 486.1 352 69.3
BolC9t58114H Brassica oleracea HOM05D004887 ORTHO05D006168 2.2e-135 486.1 352 69.3
Medtr4g063570 Medicago truncatula HOM05D004887 ORTHO05D006168 2.2e-135 486.1 354 69.5
Potri.009G028500 Populus trichocarpa HOM05D004887 ORTHO05D006168 2.2e-135 486.1 347 72.6
Aqoxy4G02983 Aquilegia oxysepala HOM05D004887 ORTHO05D006168 2.8e-135 485.7 349 73.1
BraA10t43799Z Brassica rapa HOM05D004887 ORTHO05D006168 2.8e-135 485.7 352 69.3
MSTRG.17840 Avicennia marina HOM05D004887 ORTHO05D006168 4.8e-135 485.0 355 71.5
Eucgr.B02388 Eucalyptus grandis HOM05D004887 ORTHO05D006168 8.2e-135 484.2 351 70.7
A10p17180 Brassica napus HOM05D004887 ORTHO05D006168 1.1e-134 483.8 352 69.0
Sp6g21640 Schrenkiella parvula HOM05D004887 ORTHO05D006168 1.4e-134 483.4 352 69.0
THA.LOC104799466 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 3.1e-134 482.3 351 70.9
Gorai.004G004400 Gossypium raimondii HOM05D004887 ORTHO05D006168 4.1e-134 481.9 347 71.5
Manes.04G032300 Manihot esculenta HOM05D004887 ORTHO05D006168 5.3e-134 481.5 348 72.4
CANSAT54G1644 Cannabis sativa HOM05D004887 ORTHO05D006168 7.0e-134 481.1 358 70.1
Nn2g12934 Nelumbo nucifera HOM05D004887 ORTHO05D006168 2.6e-133 479.2 354 71.2
EL10Ac7g15978 Beta vulgaris HOM05D004887 ORTHO05D006168 4.5e-133 478.4 355 69.3
Gohir.D08G010900 Gossypium hirsutum HOM05D004887 ORTHO05D006168 4.5e-133 478.4 347 71.2
Glyma.12G064800 Glycine max HOM05D004887 ORTHO05D006168 5.9e-133 478.0 354 70.3
PSO384G2944 Papaver somniferum HOM05D004887 ORTHO05D006168 7.7e-133 477.6 357 68.6
ECA247G3571 Erigeron canadensis HOM05D004887 ORTHO05D006168 1.0e-132 477.2 339 72.9
CsaV3_1G033620 Cucumis sativus L. HOM05D004887 ORTHO05D006168 6.5e-132 474.6 356 69.7
HanXRQChr06g0175771 Helianthus annuus HOM05D004887 ORTHO05D006168 6.5e-132 474.6 344 72.1
PSO339G5095 Papaver somniferum HOM05D004887 ORTHO05D006168 1.9e-131 473.0 357 68.9
AL8G36530 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 2.5e-131 472.6 376 66.2
Manes.11G133000 Manihot esculenta HOM05D004887 ORTHO05D006168 2.5e-131 472.6 348 71.0
AL781U10010 Arabidopsis lyrata HOM05D004887 ORTHO05D006168 7.2e-131 471.1 339 71.1
Lsat_1_v5_gn_9_22360 Lactuca sativa HOM05D004887 ORTHO05D006168 1.6e-130 469.9 350 69.1
Lsat_1_v5_gn_8_77921 Lactuca sativa HOM05D004887 ORTHO05D006168 6.1e-130 468.0 348 69.8
Sc21g0005570 Simmondsia chinensis HOM05D004887 ORTHO05D006168 6.1e-130 468.0 358 67.9
A03p11380 Brassica napus HOM05D004887 ORTHO05D006168 8.0e-130 467.6 349 69.1
Duzib168G0637 Durio zibethinus HOM05D004887 ORTHO05D006168 1.2e-128 463.8 348 71.0
Aa31LG1G12090 Aethionema arabicum HOM05D004887 ORTHO05D006168 2.6e-128 462.6 349 68.8
CSS0048955 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 2.8e-127 459.1 337 72.1
arahy.Tifrunner.gnm1.ann1.LTG2DU Arachis hypogaea HOM05D004887 ORTHO05D006168 3.7e-127 458.8 373 64.1
ClCG03G001950 Citrullus lanatus HOM05D004887 ORTHO05D006168 3.7e-127 458.8 380 64.7
SalBow3G3342 Salvia bowleyana HOM05D004887 ORTHO05D006168 2.4e-126 456.1 377 63.4
Os01g0151600 Oryza sativa ssp. japonica HOM05D004887 ORTHO05D006168 4.5e-125 451.8 351 65.5
HPP92_015526 Vanilla planifolia HOM05D004887 ORTHO05D006168 7.7e-125 451.1 355 67.0
CSS0023093 Camellia sinensis var. sinensis HOM05D004887 ORTHO05D006168 3.8e-124 448.7 321 74.1
TWI79G0894 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 1.7e-119 433.3 299 71.2
Lj1A157T41 Lonicera japonica HOM05D004887 ORTHO05D006168 3.7e-119 432.2 317 71.0
Rhsim13G0085300 Rhododendron simsii HOM05D001446 ORTHO05D001360 1.4e-118 430.3 395 58.2
Psat7g217880 Pisum sativum HOM05D004887 ORTHO05D006168 3.1e-118 429.1 369 62.9
Zm00001eb124290 Zea mays HOM05D004887 ORTHO05D006168 7.0e-118 427.9 340 63.2
AUR62009609 Chenopodium quinoa HOM05D004887 ORTHO05D006168 4.2e-115 418.7 313 70.6
SGA_v2.0_scaffold61G21266 Striga asiatica HOM05D004887 ORTHO05D006168 2.1e-114 416.4 340 67.6
Duzib170G0837 Durio zibethinus HOM05D004887 ORTHO05D006168 1.0e-113 414.1 339 67.3
FAN11G2539 Fragaria x ananassa HOM05D004887 ORTHO05D006168 8.9e-113 411.0 341 67.2
arahy.Tifrunner.gnm1.ann1.RHUE9Y Arachis hypogaea HOM05D004887 ORTHO05D006168 1.2e-112 410.6 302 67.2
QL01p032955 Quercus lobata HOM05D004887 ORTHO05D006168 2.6e-112 409.5 339 65.8
Atru.chr3.3838 Acer truncatum HOM05D004887 ORTHO05D006168 4.4e-112 408.7 297 74.1
MELO3C020709.2 Cucumis melo HOM05D004887 ORTHO05D006168 2.2e-111 406.4 302 68.5
FAN25G2556 Fragaria x ananassa HOM05D004887 ORTHO05D006168 2.9e-111 406.0 341 66.3
Cfa011464 Carpinus fangiana HOM05D004887 ORTHO05D006168 2.4e-110 402.9 345 64.6
Lj2C1057T15 Lonicera japonica HOM05D004887 ORTHO05D006168 1.2e-109 400.6 240 80.0
Haze_24049 Corylus avellana HOM05D004887 ORTHO05D006168 1.0e-108 397.5 297 71.0
Sed0009981 Sechium edule HOM05D004887 ORTHO05D006168 6.6e-108 394.8 283 69.3
Carub.0008s2049 Capsella rubella HOM05D004887 ORTHO05D006168 2.8e-106 389.4 233 80.7
AUR62001822 Chenopodium quinoa HOM05D004887 ORTHO05D006168 4.7e-106 388.7 296 69.6
BraA03t10452Z Brassica rapa HOM05D004887 ORTHO05D006168 7.5e-104 381.3 233 78.5
CDE07G1169 Ceratophyllum demersum HOM05D004887 ORTHO05D006168 1.7e-103 380.2 351 61.3
THA.LOC104810819 Tarenaya hassleriana HOM05D004887 ORTHO05D006168 2.2e-103 379.8 297 67.0
unitig_899.g14894 Utricularia gibba HOM05D004887 ORTHO05D006168 5.4e-102 375.2 306 64.7
ATR0559G318 Amborella trichopoda HOM05D004887 ORTHO05D006168 6.6e-100 368.2 300 64.7
TWI31G1179 Tripterygium wilfordii HOM05D004887 ORTHO05D006168 5.8e-96 355.1 348 57.5
Actinidia07046 Actinidia chinensis HOM05D004887 ORTHO05D006168 1.7e-92 343.6 255 71.4
Nitab4.5_0000610g0050 Nicotiana tabacum HOM05D004887 ORTHO05D006168 1.7e-92 343.6 360 57.8
Psat7g218040 Pisum sativum HOM05D004887 ORTHO05D006168 1.5e-91 340.5 297 60.3
Pp3c8_24390 Physcomitrium patens HOM05D004887 ORTHO05D006168 5.6e-91 338.6 342 51.8
FAN16G2077 Fragaria x ananassa HOM05D001446 ORTHO05D001360 6.2e-90 335.1 259 71.4
Pp3c24_20310 Physcomitrium patens HOM05D004887 ORTHO05D006168 1.8e-89 333.6 342 51.8
Thecc.09G325700 Theobroma cacao HOM05D004887 ORTHO05D006168 4.9e-87 325.5 248 72.6
Dinv03548 Davidia involucrata HOM05D004887 ORTHO05D006168 6.4e-87 325.1 234 74.4
Sabra16G0142900 Salix brachista HOM05D001446 ORTHO05D001360 3.2e-86 322.8 387 51.4
TAR623G0510 Trochodendron aralioides HOM05D004887 ORTHO05D006168 2.1e-85 320.1 256 69.9
SMO118G0033 Selaginella moellendorffii HOM05D004887 ORTHO05D006168 4.6e-85 318.9 330 52.7
Mapoly0001s0555 Marchantia polymorpha HOM05D004887 ORTHO05D006168 1.9e-83 313.5 349 47.9
CARHR273590 Cardamine hirsuta HOM05D004887 ORTHO05D006168 2.5e-83 313.2 190 78.9
Ca_19183_v3 Cicer arietinum L. HOM05D004887 ORTHO05D006168 2.1e-82 310.1 254 66.5
vmacro03096 Vaccinium macrocarpon HOM05D004887 ORTHO05D006168 4.4e-80 302.4 303 56.4
SalBow2G3032 Salvia bowleyana HOM05D004887 ORTHO05D006168 3.5e-77 292.7 261 62.1
AagrBONN_evm.TU.Sc2ySwM_344.5355 Anthoceros agrestis HOM05D004887 ORTHO05D006168 9.6e-75 284.6 277 51.6
Nn2g10420 Nelumbo nucifera HOM05D004887 ORTHO05D006168 6.9e-73 278.5 226 67.3
CBR_g46654 Chara braunii HOM05D004887 ORTHO05D006168 1.3e-66 257.7 318 44.0
Gohir.A08G000181 Gossypium hirsutum HOM05D004887 ORTHO05D006168 2.1e-66 256.9 226 62.4
Psat7g218000 Pisum sativum HOM05D004887 ORTHO05D006168 6.2e-58 228.8 193 61.7
CARHR273600 Cardamine hirsuta HOM05D004887 ORTHO05D006168 1.9e-43 180.6 159 62.9
PSO384G0451 Papaver somniferum HOM05D004887 ORTHO05D006168 3.7e-42 176.4 199 53.8
Carub.0008s2068 Capsella rubella HOM05D004887 ORTHO05D006168 2.5e-30 137.1 98 66.3
Sabra09G0019700 Salix brachista HOM05D004887 ORTHO05D006168 2.3e-28 130.6 184 48.9
C06p04980 Brassica napus HOM05D004887 ORTHO05D006168 4.4e-27 126.3 73 75.3
BolC6t35622H Brassica oleracea HOM05D004887 ORTHO05D006168 7.4e-27 125.6 74 77.0
A02p35440 Brassica napus HOM05D004887 ORTHO05D006168 9.7e-27 125.2 73 75.3
BraA02t08545Z Brassica rapa HOM05D004887 ORTHO05D006168 9.7e-27 125.2 73 75.3
C03p13170 Brassica napus HOM05D004887 ORTHO05D006168 2.2e-26 124.0 73 76.7
Duzib205G1865 Durio zibethinus HOM05D004887 ORTHO05D006168 2.6e-24 117.1 136 52.2
BolC3t13778H Brassica oleracea HOM05D004887 ORTHO05D006168 7.7e-24 115.5 63 81.0
HanXRQChr07g0192801 Helianthus annuus HOM05D004887 ORTHO05D225384 1.3e-07 61.6 50 64.0
Lj1A771T11 Lonicera japonica HOM05D004887 ORTHO05D234499 1.3e-07 61.6 40 72.5
HanXRQChr05g0134321 Helianthus annuus HOM05D004887 ORTHO05D025733 2.5e-06 57.4 46 56.5
Lj1A771T12 Lonicera japonica HOM05D024127 ORTHO05D025733 4.2e-06 56.6 35 68.6
C03p13130 Brassica napus HOM05D004887 ORTHO05D006168 5.5e-06 56.2 75 44.0


User provided reference genes

Program Settings