Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003779g0180 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.1e-220 769.6 387 100.0
Nitab4.5_0001702g0130 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.7e-213 745.7 395 96.2
Dinv43851 Davidia involucrata HOM05D003847 ORTHO05D004976 1.5e-201 706.1 387 90.4
Sopen01g038710 Solanum pennellii HOM05D003847 ORTHO05D004976 1.4e-199 699.5 425 83.3
Solyc01g094930.3 Solanum lycopersicum HOM05D003847 ORTHO05D004976 3.2e-199 698.4 425 83.3
ClCG05G001330 Citrullus lanatus HOM05D003847 ORTHO05D004976 3.5e-198 694.9 387 88.1
Nitab4.5_0001269g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 4.6e-198 694.5 377 91.5
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 6.0e-198 694.1 425 83.1
CAN.G78.110 Capsicum annuum HOM05D003847 ORTHO05D004976 1.8e-197 692.6 425 82.8
CSS0029735 Camellia sinensis var. sinensis HOM05D003847 ORTHO05D004976 2.5e-196 688.7 425 82.6
Nitab4.5_0011900g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 5.6e-196 687.6 437 81.7
Haze_15549 Corylus avellana HOM05D003847 ORTHO05D004976 9.6e-196 686.8 387 87.6
MBI04_g26959_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D004976 6.2e-195 684.1 393 85.2
GSVIVG01026981001 Vitis vinifera HOM05D003847 ORTHO05D004976 6.9e-194 680.6 425 80.9
SalBow5G2471 Salvia bowleyana HOM05D003847 ORTHO05D004976 1.2e-193 679.9 404 84.9
QL04p055042 Quercus lobata HOM05D003847 ORTHO05D004976 1.5e-193 679.5 424 79.7
Cc02_g38410 Coffea canephora HOM05D003847 ORTHO05D004976 2.0e-193 679.1 425 81.4
Ciclev10020054m.g Citrus clementina HOM05D003847 ORTHO05D004976 7.6e-193 677.2 422 81.0
Prupe.2G175500 Prunus persica HOM05D003847 ORTHO05D004976 7.6e-193 677.2 425 79.8
COL.COLO4_12761 Corchorus olitorius HOM05D003847 ORTHO05D004976 9.9e-193 676.8 425 80.7
Manes.05G031000 Manihot esculenta HOM05D003847 ORTHO05D004976 1.7e-192 676.0 425 80.2
Actinidia02826 Actinidia chinensis HOM05D003847 ORTHO05D004976 2.9e-192 675.2 425 80.7
Migut.N01455 Erythranthe guttata HOM05D003847 ORTHO05D004976 6.4e-192 674.1 425 80.9
Gohir.A11G091500 Gossypium hirsutum HOM05D003847 ORTHO05D004976 3.2e-191 671.8 425 80.2
PGR042G1058 Punica granatum HOM05D003847 ORTHO05D004976 3.2e-191 671.8 425 80.0
Gorai.007G102500 Gossypium raimondii HOM05D003847 ORTHO05D004976 4.2e-191 671.4 425 80.2
Thecc.01G354200 Theobroma cacao HOM05D003847 ORTHO05D004976 7.1e-191 670.6 425 80.5
Hund16669 Selenicereus undatus HOM05D003847 ORTHO05D004976 1.6e-190 669.5 426 79.6
vmacro20904 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.6e-190 669.5 379 87.9
Potri.002G162700 Populus trichocarpa HOM05D003847 ORTHO05D004976 2.1e-190 669.1 425 79.8
FAN10G1372 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.5e-190 668.3 424 78.8
Gohir.D11G096200 Gossypium hirsutum HOM05D003847 ORTHO05D004976 4.6e-190 667.9 425 80.0
MELO3C006089.2 Cucumis melo HOM05D003847 ORTHO05D004976 6.0e-190 667.5 425 79.1
FAN10G2219 Fragaria x ananassa HOM05D003847 ORTHO05D004976 7.9e-190 667.2 424 78.8
CANSAT56G2934 Cannabis sativa HOM05D003847 ORTHO05D004976 1.0e-189 666.8 425 79.1
DCAR_025211 Daucus carota HOM05D003847 ORTHO05D004976 1.0e-189 666.8 425 79.1
CsaV3_3G008710 Cucumis sativus L. HOM05D003847 ORTHO05D004976 1.3e-189 666.4 425 78.6
FAN06G3510 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.3e-189 666.4 424 78.8
MD01G1069400 Malus domestica HOM05D003847 ORTHO05D004976 1.3e-189 666.4 425 78.4
Sed0007018 Sechium edule HOM05D003847 ORTHO05D004976 2.3e-189 665.6 425 77.9
AUR62004399 Chenopodium quinoa HOM05D003847 ORTHO05D004976 6.7e-189 664.1 426 78.6
RcHm_v2.0_Chr1g0357201 Rosa chinensis HOM05D003847 ORTHO05D004976 6.7e-189 664.1 425 78.6
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea HOM05D003847 ORTHO05D004976 1.5e-188 662.9 422 79.1
AUR62022605 Chenopodium quinoa HOM05D003847 ORTHO05D004976 1.5e-188 662.9 426 78.6
CiPaw.01G065300 Carya illinoinensis HOM05D003847 ORTHO05D004976 2.5e-188 662.1 425 78.6
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea HOM05D003847 ORTHO05D004976 4.3e-188 661.4 422 79.1
Nn1g01640 Nelumbo nucifera HOM05D003847 ORTHO05D004976 5.6e-188 661.0 425 78.4
Potri.014G088900 Populus trichocarpa HOM05D003847 ORTHO05D004976 5.6e-188 661.0 425 78.6
HanXRQChr17g0562361 Helianthus annuus HOM05D003847 ORTHO05D004976 9.6e-188 660.2 425 79.3
Eucgr.D02317 Eucalyptus grandis HOM05D003847 ORTHO05D004976 1.6e-187 659.4 425 79.8
Lsat_1_v5_gn_4_34641 Lactuca sativa HOM05D003847 ORTHO05D004976 2.1e-187 659.1 425 78.6
SGA_v2.0_scaffold43G16402 Striga asiatica HOM05D003847 ORTHO05D004976 2.8e-187 658.7 425 78.6
Lj9C587T13 Lonicera japonica HOM05D003847 ORTHO05D004976 3.7e-187 658.3 425 80.7
ECA234G3268 Erigeron canadensis HOM05D003847 ORTHO05D004976 4.8e-187 657.9 424 78.8
Lalb_Chr04g0259201 Lupinus albus HOM05D003847 ORTHO05D004976 6.2e-187 657.5 425 77.4
Glyma.18G237300 Glycine max HOM05D003847 ORTHO05D004976 8.2e-187 657.1 425 77.4
DCAR_008629 Daucus carota HOM05D003847 ORTHO05D004976 1.1e-186 656.8 425 78.4
Duzib133G1387 Durio zibethinus HOM05D003847 ORTHO05D004976 3.1e-186 655.2 417 79.9
FAN03G1748 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.3e-186 654.4 438 76.0
Lj1g0024026 Lotus japonicus HOM05D003847 ORTHO05D004976 5.3e-186 654.4 425 76.9
MSTRG.28227 Avicennia marina HOM05D003847 ORTHO05D004976 6.9e-186 654.1 425 79.1
Phvul.008G059300 Phaseolus vulgaris HOM05D003847 ORTHO05D004976 1.2e-185 653.3 425 76.5
TWI59G0695 Tripterygium wilfordii HOM05D003847 ORTHO05D004976 1.5e-185 652.9 425 77.6
Ca_00820_v3 Cicer arietinum L. HOM05D003847 ORTHO05D004976 2.0e-185 652.5 421 77.9
Aqoxy5G04080 Aquilegia oxysepala HOM05D003847 ORTHO05D004976 3.4e-185 651.7 425 77.9
VMungo1383G0817 Vigna mungo HOM05D003847 ORTHO05D004976 4.5e-185 651.4 425 76.2
EL10Ac1g00369 Beta vulgaris HOM05D003847 ORTHO05D004976 5.8e-185 651.0 438 76.0
FAN01G0997 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.8e-185 651.0 414 79.2
CDE11G0931 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 1.3e-184 649.8 425 76.7
Glyma.09G255600 Glycine max HOM05D003847 ORTHO05D004976 2.2e-184 649.0 425 76.5
Sabra02G0147800 Salix brachista HOM05D003847 ORTHO05D004976 4.9e-184 647.9 449 75.1
Medtr7g078760 Medicago truncatula HOM05D003847 ORTHO05D004976 6.5e-184 647.5 421 77.2
BcaC04g24142 Brassica carinata HOM05D003847 ORTHO05D004976 1.9e-183 646.0 425 76.9
C09p00660 Brassica napus HOM05D003847 ORTHO05D004976 1.9e-183 646.0 425 76.9
Sc26g0000820 Simmondsia chinensis HOM05D003847 ORTHO05D004976 2.5e-183 645.6 425 76.2
C03p39000 Brassica napus HOM05D003847 ORTHO05D004976 4.2e-183 644.8 425 76.9
BolC3t16172H Brassica oleracea HOM05D003847 ORTHO05D004976 4.2e-183 644.8 425 76.9
Thhalv10028603m.g Eutrema salsugineum HOM05D003847 ORTHO05D004976 4.2e-183 644.8 425 77.4
THA.LOC104817033 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 5.5e-183 644.4 423 77.3
BraA03t12370Z Brassica rapa HOM05D003847 ORTHO05D004976 1.2e-182 643.3 425 76.7
CARHR249000 Cardamine hirsuta HOM05D003847 ORTHO05D004976 1.2e-182 643.3 425 77.6
BraA09t35735Z Brassica rapa HOM05D003847 ORTHO05D004976 1.6e-182 642.9 425 76.7
A09p00040 Brassica napus HOM05D003847 ORTHO05D004976 2.1e-182 642.5 425 76.5
AT4G01320 Arabidopsis thaliana HOM05D003847 ORTHO05D004976 2.7e-182 642.1 425 77.4
BolC9t53000H Brassica oleracea HOM05D003847 ORTHO05D004976 2.7e-182 642.1 425 76.5
Sp6g00820 Schrenkiella parvula HOM05D003847 ORTHO05D004976 2.7e-182 642.1 425 77.4
Carub.0006s3638 Capsella rubella HOM05D003847 ORTHO05D004976 3.5e-182 641.7 425 77.4
THA.LOC104825858 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 6.0e-182 641.0 425 77.2
BcaB01g02281 Brassica carinata HOM05D003847 ORTHO05D004976 1.0e-181 640.2 425 76.2
Cfa003885 Carpinus fangiana HOM05D003847 ORTHO05D004976 2.3e-181 639.0 373 85.5
ATR0661G289 Amborella trichopoda HOM05D003847 ORTHO05D004976 3.0e-181 638.6 422 75.4
BcaB01g02153 Brassica carinata HOM05D003847 ORTHO05D004976 3.9e-181 638.3 420 76.9
Sabra14G0064600 Salix brachista HOM05D003847 ORTHO05D004976 5.1e-181 637.9 415 77.6
CDE09G0314 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 1.5e-180 636.3 425 74.8
BcaC01g06856 Brassica carinata HOM05D003847 ORTHO05D004976 3.3e-180 635.2 420 76.7
Sabra02G0148200 Salix brachista HOM05D003847 ORTHO05D004976 7.4e-180 634.0 471 71.5
TPR.G22298 Trifolium pratense HOM05D003847 ORTHO05D004976 1.8e-178 629.4 421 75.8
RcHm_v2.0_Chr1g0357211 Rosa chinensis HOM05D003847 ORTHO05D004976 2.4e-178 629.0 425 73.4
A03p31980 Brassica napus HOM05D003847 ORTHO05D004976 5.3e-178 627.9 418 76.3
Zm00001eb187240 Zea mays HOM05D003847 ORTHO05D004976 6.9e-178 627.5 424 73.8
AL6G52080 Arabidopsis lyrata HOM05D003847 ORTHO05D004976 2.0e-177 625.9 413 78.0
FAN10G0014 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.6e-177 625.5 425 72.7
Os02g0680400 Oryza sativa ssp. japonica HOM05D003847 ORTHO05D004976 4.5e-177 624.8 424 73.6
FvH4_7g15083 Fragaria vesca HOM05D003847 ORTHO05D004976 1.7e-176 622.9 425 72.7
Peaxi162Scf00020g01122 Petunia axillaris HOM05D003847 ORTHO05D004976 3.8e-176 621.7 377 83.8
Atru.chr5.1381 Acer truncatum HOM05D003847 ORTHO05D004976 1.9e-175 619.4 420 73.8
Duzib138G0396 Durio zibethinus HOM05D003847 ORTHO05D004976 1.2e-174 616.7 399 78.4
PSO478G2530 Papaver somniferum HOM05D003847 ORTHO05D004976 1.0e-173 613.6 422 73.2
PSO782G0912 Papaver somniferum HOM05D003847 ORTHO05D004976 3.9e-173 611.7 422 73.0
SEGI_36957 Sequoiadendron giganteum HOM05D003847 ORTHO05D004976 3.1e-170 602.1 422 71.1
vmacro04325 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 5.3e-170 601.3 393 76.8
FAN03G0710 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.6e-169 599.0 419 71.4
Pp3c4_3300 Physcomitrium patens HOM05D003847 ORTHO05D004976 4.4e-164 581.6 423 69.0
Oeu036597.2 Olea europaea HOM05D003847 ORTHO05D004976 5.7e-164 581.3 611 55.0
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis HOM05D003847 ORTHO05D004976 7.4e-164 580.9 423 68.3
Mapoly0151s0045 Marchantia polymorpha HOM05D003847 ORTHO05D004976 3.7e-163 578.6 423 69.0
Oeu015226.2 Olea europaea HOM05D003847 ORTHO05D004976 4.8e-163 578.2 411 73.5
TAR629G0433 Trochodendron aralioides HOM05D003847 ORTHO05D004976 6.3e-163 577.8 416 71.9
Pp3c12_25070 Physcomitrium patens HOM05D003847 ORTHO05D004976 5.3e-162 574.7 423 67.6
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 1.4e-159 566.6 422 67.5
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea HOM05D003847 ORTHO05D004976 5.2e-157 558.1 422 69.9
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.4e-156 555.1 412 68.0
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 7.4e-156 554.3 406 68.5
SMO364G0773 Selaginella moellendorffii HOM05D003847 ORTHO05D004976 7.4e-156 554.3 425 64.9
FAN10G3576 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.8e-155 552.4 416 66.8
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 1.7e-152 543.1 302 89.1
RcHm_v2.0_Chr1g0357271 Rosa chinensis HOM05D003847 ORTHO05D004976 3.8e-152 542.0 410 67.1
TAR375G0471 Trochodendron aralioides HOM05D003847 ORTHO05D004976 7.2e-151 537.7 353 76.5
Psat3g106680 Pisum sativum HOM05D003847 ORTHO05D004976 1.6e-150 536.6 364 74.2
FvH4_7g15081 Fragaria vesca HOM05D003847 ORTHO05D004976 1.8e-149 533.1 301 86.0
HanXRQChr16g0521851 Helianthus annuus HOM05D003847 ORTHO05D004976 4.0e-149 531.9 410 67.8
Sed0024082 Sechium edule HOM05D003847 ORTHO05D004976 5.2e-149 531.6 302 85.8
Atru.chr5.547 Acer truncatum HOM05D003847 ORTHO05D004976 6.7e-149 531.2 302 85.1
FAN06G4922 Fragaria x ananassa HOM05D003847 ORTHO05D004976 6.3e-147 524.6 413 66.1
HanXRQChr16g0521861 Helianthus annuus HOM05D003847 ORTHO05D004976 7.0e-146 521.2 430 63.5
Aa31LG5G720 Aethionema arabicum HOM05D003847 ORTHO05D004976 6.5e-144 514.6 302 82.8
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.0e-141 507.3 403 63.5
CBR_g23782 Chara braunii HOM05D003847 ORTHO05D004976 3.7e-139 498.8 418 58.9
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.7e-134 481.9 399 62.4
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 6.3e-131 471.5 385 64.9
HPP92_022235 Vanilla planifolia HOM05D003847 ORTHO05D004976 1.1e-130 470.7 312 77.2
QL12p031965 Quercus lobata HOM05D003847 ORTHO05D004976 5.8e-124 448.4 423 55.1
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea HOM05D003847 ORTHO05D004976 3.0e-112 409.5 281 74.7
Medtr8g028680 Medicago truncatula HOM05D003847 ORTHO05D004976 3.0e-112 409.5 442 52.5
Hund27252 Selenicereus undatus HOM05D003847 ORTHO05D004976 4.7e-110 402.1 435 51.3
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 8.1e-110 401.4 286 71.7
Psat2g071920 Pisum sativum HOM05D003847 ORTHO05D004976 2.4e-106 389.8 252 75.4
Cre07.g356150 Chlamydomonas reinhardtii HOM05D003847 ORTHO05D004976 2.6e-100 369.8 431 47.1
vmacro05292 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 7.3e-95 351.7 465 45.6
MSTRG.4846 Avicennia marina HOM05D003847 ORTHO05D004976 1.2e-92 344.4 237 75.5
PRCOL_00003828 Prasinoderma coloniale HOM05D003847 ORTHO05D004976 3.4e-84 316.2 436 42.2
Gohir.A13G099905 Gossypium hirsutum HOM05D003847 ORTHO05D004976 4.9e-83 312.4 199 78.9
Haze_26886 Corylus avellana HOM05D003847 ORTHO05D004976 1.2e-73 281.2 410 39.5
vmacro05290 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.3e-72 277.7 239 61.5
Psat1g001760 Pisum sativum HOM05D003847 ORTHO05D004976 1.6e-70 270.8 168 77.4
unitig_22.g6721 Utricularia gibba HOM05D001167 ORTHO05D001054 2.8e-70 270.0 155 80.6
Hma1.2p1_0456F.1_g156440 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 2.0e-68 263.8 166 78.9
SalBow5G1235 Salvia bowleyana HOM05D003847 ORTHO05D004976 1.3e-64 251.1 253 58.1
Cpa.g.sc184.22 Carica papaya HOM05D003847 ORTHO05D004976 3.8e-59 233.0 171 69.6
Atru.chr12.614 Acer truncatum HOM05D003847 ORTHO05D004976 1.6e-57 227.6 150 76.0
CANSAT25G3593 Cannabis sativa HOM05D003847 ORTHO05D004976 1.0e-56 224.9 158 74.1
RcHm_v2.0_Chr3g0493601 Rosa chinensis HOM05D003847 ORTHO05D004976 3.5e-36 156.8 96 80.2
Mapoly1163s0001 Marchantia polymorpha HOM05D003847 ORTHO05D026554 4.7e-33 146.4 87 80.5
CANSAT25G0211 Cannabis sativa HOM05D003847 ORTHO05D004976 8.0e-33 145.6 87 80.5
COL.COLO4_08374 Corchorus olitorius HOM05D000137 ORTHO05D000382 3.7e-30 136.7 213 39.9
SGA_v2.0_scaffold190G40413 Striga asiatica HOM05D003847 ORTHO05D004976 3.7e-30 136.7 126 61.9
RcHm_v2.0_Chr1g0357221 Rosa chinensis HOM05D003847 ORTHO05D026554 1.7e-19 101.3 192 36.5
ATR0763G219 Amborella trichopoda HOM05D003847 ORTHO05D026554 5.0e-19 99.8 58 81.0
Lsat_1_v5_gn_8_14540 Lactuca sativa HOM05D003847 ORTHO05D005301 1.6e-17 94.7 166 39.2
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 2.2e-14 84.3 47 89.4
TAR365G1016 Trochodendron aralioides HOM05D000001 ORTHO05D000003 8.3e-14 82.4 54 75.9
vmacro05291 Vaccinium macrocarpon HOM05D003847 ORTHO05D026554 1.5e-10 71.6 48 75.0
Lsat_1_v5_gn_3_43021 Lactuca sativa HOM05D003847 ORTHO05D028506 3.3e-10 70.5 98 44.9
Lsat_1_v5_gn_2_83340 Lactuca sativa HOM05D003847 ORTHO05D028506 5.6e-10 69.7 74 52.7
CAN.G13.12 Capsicum annuum HOM05D002403 ORTHO05D028506 3.6e-09 67.0 46 65.2
Lsat_1_v5_gn_9_59821 Lactuca sativa HOM05D000726 ORTHO05D025737 6.1e-09 66.2 32 90.6
Lsat_1_v5_gn_8_143621 Lactuca sativa HOM05D003847 ORTHO05D028506 1.0e-08 65.5 49 65.3
BcaC03g16052 Brassica carinata HOM05D003847 ORTHO05D004976 1.8e-08 64.7 38 78.9
HanXRQChr14g0436691 Helianthus annuus HOM05D003847 ORTHO05D025737 6.8e-08 62.8 35 80.0
Psat5g164800 Pisum sativum HOM05D003847 ORTHO05D004976 6.8e-08 62.8 120 37.5
CAN.G1511.3 Capsicum annuum HOM05D002403 ORTHO05D002724 2.0e-07 61.2 30 86.7
RcHm_v2.0_Chr2g0131551 Rosa chinensis HOM05D003847 ORTHO05D025737 1.3e-06 58.5 44 59.1
HanXRQChr04g0097131 Helianthus annuus HOM05D009775 ORTHO05D219867 6.4e-06 56.2 65 44.6


User provided reference genes

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