Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003779g0040 Nicotiana tabacum HOM05D008545 ORTHO05D010341 1.0e-108 396.7 195 100.0
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 1.5e-80 303.1 218 72.0
Peaxi162Scf00403g00718 Petunia axillaris HOM05D008545 ORTHO05D010341 2.3e-65 252.7 226 59.7
PGSC0003DMG400033878 Solanum tuberosum HOM05D008545 ORTHO05D010341 6.2e-58 228.0 228 52.2
CAN.G310.5 Capsicum annuum HOM05D008545 ORTHO05D010341 1.7e-55 219.9 227 52.9
Solyc05g050240.3 Solanum lycopersicum HOM05D008545 ORTHO05D010341 1.2e-48 197.2 225 47.1
Sopen05g028690 Solanum pennellii HOM05D008545 ORTHO05D010341 3.3e-35 152.5 178 47.8
Thecc.01G347700 Theobroma cacao HOM05D008545 ORTHO05D010341 3.4e-24 115.9 197 35.5
Lj9A592T71 Lonicera japonica HOM05D008545 ORTHO05D010341 8.4e-23 111.3 197 38.1
Atru.chr5.619 Acer truncatum HOM05D008545 ORTHO05D010341 1.9e-22 110.2 187 34.8
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 1.9e-22 110.2 189 35.4
Lj7A504G55 Lonicera japonica HOM05D008545 ORTHO05D010341 1.6e-21 107.1 191 36.6
Duzib138G0500 Durio zibethinus HOM05D008545 ORTHO05D010341 3.5e-21 105.9 225 33.8
Gohir.D07G144800 Gossypium hirsutum HOM05D008545 ORTHO05D010341 2.3e-20 103.2 199 33.2
Gorai.001G156800 Gossypium raimondii HOM05D008545 ORTHO05D010341 2.3e-20 103.2 199 33.2
Dinv43892 Davidia involucrata HOM05D008545 ORTHO05D010341 3.9e-20 102.4 166 39.2
Gohir.A07G139700 Gossypium hirsutum HOM05D008545 ORTHO05D010341 3.9e-20 102.4 198 34.3
Potri.014G094600 Populus trichocarpa HOM05D008545 ORTHO05D010341 6.7e-20 101.7 194 35.1
Potri.002G167500 Populus trichocarpa HOM05D008545 ORTHO05D010341 1.1e-19 100.9 190 34.7
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 2.5e-19 99.8 195 30.3
PGR031G2054 Punica granatum HOM05D008545 ORTHO05D010341 1.6e-18 97.1 208 32.7
Manes.01G249300 Manihot esculenta HOM05D008545 ORTHO05D010341 7.6e-16 88.2 224 31.7
MSTRG.17319 Avicennia marina HOM05D008545 ORTHO05D010341 4.9e-15 85.5 214 27.6
CSS0024380 Camellia sinensis var. sinensis HOM05D008545 ORTHO05D010341 4.9e-15 85.5 185 33.5
Eucgr.D02345 Eucalyptus grandis HOM05D008545 ORTHO05D010341 1.1e-14 84.3 195 29.7
DCAR_016077 Daucus carota HOM05D009167 ORTHO05D010341 1.0e-12 77.8 229 29.3
Sabra14G0069200 Salix brachista HOM05D008545 ORTHO05D010341 3.0e-12 76.3 139 34.5
MD07G1144400 Malus domestica HOM05D008545 ORTHO05D010341 1.6e-10 70.5 178 29.2
SGA_v2.0_scaffold5G02985 Striga asiatica HOM05D008545 ORTHO05D010341 1.6e-10 70.5 69 46.4
Oeu007845.1 Olea europaea HOM05D008545 ORTHO05D010341 2.8e-10 69.7 202 33.7
SalBow3G1564 Salvia bowleyana HOM05D008545 ORTHO05D010341 4.8e-10 68.9 211 32.7
COL.COLO4_06334 Corchorus olitorius HOM05D002314 ORTHO05D002538 6.2e-10 68.6 66 48.5
Prupe.2G183300 Prunus persica HOM05D008545 ORTHO05D010341 3.8e-07 59.3 167 28.7
Cpa.g.sc194.12 Carica papaya HOM05D008545 ORTHO05D010341 6.5e-07 58.5 71 45.1
Actinidia20194 Actinidia chinensis HOM05D008545 ORTHO05D010341 8.4e-07 58.2 124 33.1
CANSAT56G3993 Cannabis sativa HOM05D008545 ORTHO05D010341 8.4e-07 58.2 71 42.3
CANSAT56G3625 Cannabis sativa HOM05D008545 ORTHO05D010341 1.4e-06 57.4 69 40.6
Hma1.2p1_0384F.1_g141050 Hydrangea macrophylla HOM05D008545 ORTHO05D010341 3.2e-06 56.2 103 30.1
DCAR_016072 Daucus carota HOM05D008545 ORTHO05D010341 5.5e-06 55.5 155 29.0


User provided reference genes

Program Settings