Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003775g0050 Nicotiana tabacum HOM05D005015 ORTHO05D005696 6.7e-44 180.3 89 100.0
HanXRQChr00c0746g0577131 Helianthus annuus HOM05D005015 ORTHO05D005696 5.9e-16 87.4 49 87.8
Solyc10g044535.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 5.5e-14 80.9 51 80.4
Solyc02g012020.3 Solanum lycopersicum HOM05D005015 ORTHO05D005696 4.7e-13 77.8 47 78.7
PSO548G0131 Papaver somniferum HOM05D005015 ORTHO05D005696 2.3e-12 75.5 41 87.8
PGR111G0021 Punica granatum HOM05D005015 ORTHO05D005696 2.3e-12 75.5 41 87.8
Gohir.A10G201450 Gossypium hirsutum HOM05D005015 ORTHO05D005696 4.0e-12 74.7 44 79.5
Hma1.2p1_0414F.1_g147700 Hydrangea macrophylla HOM05D005015 ORTHO05D005696 4.0e-12 74.7 43 81.4
CAN.G877.4 Capsicum annuum HOM05D005015 ORTHO05D005696 6.8e-12 73.9 41 85.4
HanXRQChr00c0300g0573221 Helianthus annuus HOM05D005015 ORTHO05D005696 6.8e-12 73.9 45 80.0
CSS0020927 Camellia sinensis var. sinensis HOM05D005015 ORTHO05D005696 1.2e-11 73.2 41 85.4
Migut.D01335 Erythranthe guttata HOM05D005015 ORTHO05D005696 1.5e-11 72.8 41 82.9
Peaxi162Scf00379g00087 Petunia axillaris HOM05D005015 ORTHO05D005696 1.5e-11 72.8 51 72.5
HanXRQChr00c0313g0573431 Helianthus annuus HOM05D000743 ORTHO05D000580 2.0e-11 72.4 53 71.7
HanXRQChr04g0120711 Helianthus annuus HOM05D000743 ORTHO05D000580 2.0e-11 72.4 53 71.7
HanXRQChr08g0210221 Helianthus annuus HOM05D000743 ORTHO05D000580 2.0e-11 72.4 53 71.7
HanXRQChr11g0326651 Helianthus annuus HOM05D000743 ORTHO05D000580 2.0e-11 72.4 53 71.7
HanXRQCPg0579841 Helianthus annuus HOM05D000743 ORTHO05D000580 2.0e-11 72.4 53 71.7
BraSC140t45595Z Brassica rapa HOM05D005015 ORTHO05D005696 2.6e-11 72.0 40 85.0
Potri.013G137900 Populus trichocarpa HOM05D005015 ORTHO05D005696 2.6e-11 72.0 41 85.4
ATCG00130 Arabidopsis thaliana HOM05D005015 ORTHO05D005696 3.4e-11 71.6 41 82.9
BolSC29t60447H Brassica oleracea HOM05D005015 ORTHO05D005696 3.4e-11 71.6 41 82.9
BolSC29t60569H Brassica oleracea HOM05D005015 ORTHO05D005696 3.4e-11 71.6 41 82.9
BolSC37t60772H Brassica oleracea HOM05D005015 ORTHO05D005696 3.4e-11 71.6 41 82.9
BolSC46t60983H Brassica oleracea HOM05D005015 ORTHO05D005696 3.4e-11 71.6 41 82.9
BolSC49t61201H Brassica oleracea HOM05D005015 ORTHO05D005696 3.4e-11 71.6 41 82.9
BraSC140t45592Z Brassica rapa HOM05D005015 ORTHO05D005696 3.4e-11 71.6 41 82.9
BraSC143t45677Z Brassica rapa HOM05D005015 ORTHO05D005696 3.4e-11 71.6 41 82.9
BraSC151t45691Z Brassica rapa HOM05D005015 ORTHO05D005696 3.4e-11 71.6 41 82.9
CARHR281880 Cardamine hirsuta HOM05D005015 ORTHO05D005696 3.4e-11 71.6 41 82.9
Lsat_1_v5_gn_1_38680 Lactuca sativa HOM05D005015 ORTHO05D005696 3.4e-11 71.6 41 85.4
DCAR_032470 Daucus carota HOM05D005015 ORTHO05D005696 4.4e-11 71.2 41 82.9
Gohir.D10G206350 Gossypium hirsutum HOM05D005015 ORTHO05D005696 4.4e-11 71.2 43 79.1
LjContig00489g0021854 Lotus japonicus HOM05D005015 ORTHO05D005696 7.5e-11 70.5 41 82.9
Sed0007367 Sechium edule HOM05D005015 ORTHO05D005696 7.5e-11 70.5 41 85.4
Sed0007878 Sechium edule HOM05D005015 ORTHO05D005696 7.5e-11 70.5 41 85.4
Sed0025514 Sechium edule HOM05D005015 ORTHO05D005696 7.5e-11 70.5 41 85.4
MD16G1272100 Malus domestica HOM05D005015 ORTHO05D005696 9.8e-11 70.1 50 72.0
Gohir.A10G065880 Gossypium hirsutum HOM05D005015 ORTHO05D005696 1.3e-10 69.7 38 86.8
Ah.10g027630 Amaranthus hybridus HOM05D005015 ORTHO05D005696 1.7e-10 69.3 41 82.9
EL10As12g24014 Beta vulgaris HOM05D000743 ORTHO05D000580 1.7e-10 69.3 41 82.9
Gohir.D01G157951 Gossypium hirsutum HOM05D005015 ORTHO05D005696 1.7e-10 69.3 41 80.5
Hund03959 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund19316 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund27454 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund27640 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund27652 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund27672 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund27697 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund27742 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund27807 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund27824 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund27931 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund27946 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund27994 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28016 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28060 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28129 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28142 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28151 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28161 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28177 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28187 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28210 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28258 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28390 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28502 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28650 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund28906 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund29887 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund30205 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund30312 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund30436 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund30665 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Hund31017 Selenicereus undatus HOM05D005015 ORTHO05D005696 2.8e-10 68.6 41 80.5
Aa31csc39G190 Aethionema arabicum HOM05D005015 ORTHO05D005696 4.9e-10 67.8 41 80.5
RcHm_v2.0_CPg0502451 Rosa chinensis HOM05D005015 ORTHO05D005696 6.3e-10 67.4 41 80.5
BolSC45t60880H Brassica oleracea HOM05D005015 ORTHO05D005696 8.3e-10 67.0 36 86.1
BolSC45t60933H Brassica oleracea HOM05D005015 ORTHO05D005696 8.3e-10 67.0 42 81.0
BraSC140t45611Z Brassica rapa HOM05D005015 ORTHO05D005696 8.3e-10 67.0 36 86.1
Peaxi162Scf00211g00235 Petunia axillaris HOM05D000743 ORTHO05D005696 8.3e-10 67.0 37 83.8
Solyc00g500322.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 1.1e-09 66.6 36 86.1
Solyc00g500333.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 1.1e-09 66.6 36 86.1
LjContig00318g0021444 Lotus japonicus HOM05D005015 ORTHO05D005696 2.4e-09 65.5 41 75.6
HanXRQChr00c0272g0573041 Helianthus annuus HOM05D005015 ORTHO05D005696 3.1e-09 65.1 45 75.6
BolSC44t60844H Brassica oleracea HOM05D005015 ORTHO05D005696 5.4e-09 64.3 41 78.0
Lalb_Chr08g0232621 Lupinus albus HOM05D005015 ORTHO05D005696 5.4e-09 64.3 45 71.1
Lalb_Chr09g0335321 Lupinus albus HOM05D005015 ORTHO05D005696 5.4e-09 64.3 45 71.1
Gorai.011G231900 Gossypium raimondii HOM05D005015 ORTHO05D005696 1.2e-08 63.2 42 71.4
Lalb_Chr07g0192191 Lupinus albus HOM05D005015 ORTHO05D005696 3.9e-07 58.2 37 78.4
Lalb_Chr07g0191421 Lupinus albus HOM05D005015 ORTHO05D005696 6.6e-07 57.4 45 64.4


User provided reference genes

Program Settings