Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003774g0090 Nicotiana tabacum HOM05D002239 ORTHO05D002408 3.1e-50 201.4 99 100.0
Nitab4.5_0001437g0170 Nicotiana tabacum HOM05D002239 ORTHO05D002408 5.0e-32 141.0 99 76.8
Sopen11g003010 Solanum pennellii HOM05D002239 ORTHO05D002408 1.1e-26 123.2 95 74.7
Solyc11g007090.3 Solanum lycopersicum HOM05D002239 ORTHO05D002408 5.4e-26 120.9 95 72.6
Actinidia31102 Actinidia chinensis HOM05D002239 ORTHO05D002408 7.0e-18 94.0 95 61.1
Lsat_1_v5_gn_2_104640 Lactuca sativa HOM05D002239 ORTHO05D002408 3.0e-16 88.6 96 56.2
Cc02_g09800 Coffea canephora HOM05D002239 ORTHO05D002408 3.3e-15 85.1 106 54.7
Oeu025591.1 Olea europaea HOM05D002239 ORTHO05D002408 2.8e-14 82.0 98 53.1
Rhsim09G0142600 Rhododendron simsii HOM05D002239 ORTHO05D002408 3.6e-14 81.6 98 50.0
Dinv09598 Davidia involucrata HOM05D002239 ORTHO05D002408 4.0e-13 78.2 95 53.7
TAR633G0917 Trochodendron aralioides HOM05D002239 ORTHO05D002408 1.2e-12 76.6 96 53.1
vmacro10303 Vaccinium macrocarpon HOM05D002239 ORTHO05D002408 2.0e-12 75.9 95 52.6
HanXRQChr11g0342211 Helianthus annuus HOM05D002239 ORTHO05D002408 3.4e-12 75.1 95 51.6
CSS0012373 Camellia sinensis var. sinensis HOM05D002239 ORTHO05D002408 4.4e-12 74.7 97 56.7
Haze_02516 Corylus avellana HOM05D002239 ORTHO05D002408 4.4e-12 74.7 97 50.5
CSS0035326 Camellia sinensis var. sinensis HOM05D002239 ORTHO05D002408 5.8e-12 74.3 97 56.7
SGA_v2.0_scaffold295G47530 Striga asiatica HOM05D002239 ORTHO05D002408 1.3e-11 73.2 97 52.6
Lj3A928T55 Lonicera japonica HOM05D002239 ORTHO05D002408 1.4e-10 69.7 112 50.0
SalBow6G5383 Salvia bowleyana HOM05D002239 ORTHO05D002408 2.4e-10 68.9 99 48.5
MSTRG.9087 Avicennia marina HOM05D002239 ORTHO05D002408 3.2e-10 68.6 101 53.5
Manes.10G058500 Manihot esculenta HOM05D002239 ORTHO05D002408 3.2e-10 68.6 100 46.0
Cfa011262 Carpinus fangiana HOM05D002239 ORTHO05D002408 4.1e-10 68.2 97 49.5
QL04p044850 Quercus lobata HOM05D002239 ORTHO05D002408 2.7e-09 65.5 99 50.5
THA.LOC104816465 Tarenaya hassleriana HOM05D002239 ORTHO05D002408 1.3e-08 63.2 97 42.3
Thecc.10G106700 Theobroma cacao HOM05D002239 ORTHO05D002408 1.3e-08 63.2 79 50.6
Atru.chr12.1007 Acer truncatum HOM05D002239 ORTHO05D002408 1.7e-08 62.8 100 46.0
GSVIVG01011279001 Vitis vinifera HOM05D002239 ORTHO05D002408 2.3e-08 62.4 101 46.5
EL10Ac4g08662 Beta vulgaris HOM05D002239 ORTHO05D002408 3.0e-08 62.0 90 47.8
Sed0027427 Sechium edule HOM05D002239 ORTHO05D002408 5.1e-08 61.2 102 44.1
Migut.F00908 Erythranthe guttata HOM05D002239 ORTHO05D002408 6.6e-08 60.8 99 41.4
Gohir.D12G103200 Gossypium hirsutum HOM05D002239 ORTHO05D002408 6.6e-08 60.8 79 51.9
Gorai.013G099300 Gossypium raimondii HOM05D002239 ORTHO05D002408 6.6e-08 60.8 79 51.9
Cpa.g.sc183.8 Carica papaya HOM05D002239 ORTHO05D002408 8.6e-08 60.5 95 44.2
ClCG05G021720 Citrullus lanatus HOM05D002239 ORTHO05D002408 8.6e-08 60.5 40 72.5
Duzib106G1599 Durio zibethinus HOM05D002239 ORTHO05D002408 1.5e-07 59.7 79 48.1
Thhalv10013255m.g Eutrema salsugineum HOM05D002239 ORTHO05D002408 1.5e-07 59.7 95 46.3
Hund06777 Selenicereus undatus HOM05D002239 ORTHO05D002408 1.5e-07 59.7 101 46.5
ECA238G1858 Erigeron canadensis HOM05D002239 ORTHO05D002408 1.9e-07 59.3 106 45.3
Gohir.A13G010800 Gossypium hirsutum HOM05D002239 ORTHO05D002408 1.9e-07 59.3 80 52.5
PGR044G1463 Punica granatum HOM05D002239 ORTHO05D002408 1.9e-07 59.3 97 49.5
AT5G04710 Arabidopsis thaliana HOM05D002239 ORTHO05D002408 3.3e-07 58.5 95 45.3
PSO339G1708 Papaver somniferum HOM05D002239 ORTHO05D002408 3.3e-07 58.5 85 48.2
CsaV3_5G035550 Cucumis sativus L. HOM05D002239 ORTHO05D002408 4.3e-07 58.2 100 45.0
CsaV3_7G016170 Cucumis sativus L. HOM05D002239 ORTHO05D002408 4.3e-07 58.2 100 45.0
TWI38G1828 Tripterygium wilfordii HOM05D002239 ORTHO05D002408 4.3e-07 58.2 97 43.3
CiPaw.13G038800 Carya illinoinensis HOM05D002239 ORTHO05D002408 5.6e-07 57.8 81 51.9
MELO3C012356.2 Cucumis melo HOM05D002239 ORTHO05D002408 7.3e-07 57.4 100 44.0
Eucgr.J00993 Eucalyptus grandis HOM05D002239 ORTHO05D002408 7.3e-07 57.4 100 45.0
AL6G14370 Arabidopsis lyrata HOM05D002239 ORTHO05D002408 1.2e-06 56.6 95 43.2
Carub.0006s0360 Capsella rubella HOM05D002239 ORTHO05D002408 1.6e-06 56.2 97 44.3
PSO384G4039 Papaver somniferum HOM05D002239 ORTHO05D002408 1.6e-06 56.2 49 63.3
Nn6g34940 Nelumbo nucifera HOM05D002239 ORTHO05D002408 3.6e-06 55.1 92 44.6
COL.COLO4_24561 Corchorus olitorius HOM05D002239 ORTHO05D002408 4.7e-06 54.7 79 45.6
Aa31LG11G5550 Aethionema arabicum HOM05D002239 ORTHO05D002408 6.2e-06 54.3 75 50.7
Potri.008G021700 Populus trichocarpa HOM05D002239 ORTHO05D002408 6.2e-06 54.3 103 41.7
Peaxi162Scf00173g00520 Petunia axillaris HOM05D002239 ORTHO05D002408 8.1e-06 53.9 29 89.7


User provided reference genes

Program Settings