Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 5.3e-104 380.9 183 100.0
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 5.5e-85 317.8 207 77.3
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 1.7e-81 306.2 184 79.9
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 1.7e-81 306.2 182 79.7
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 4.5e-79 298.1 183 78.1
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 4.5e-79 298.1 176 80.7
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 4.9e-65 251.5 184 66.8
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 1.2e-63 246.9 138 82.6
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 2.7e-63 245.7 186 65.1
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 1.3e-62 243.4 185 64.9
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 5.6e-61 238.0 138 77.5
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 7.3e-61 237.7 188 60.1
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 9.5e-61 237.3 142 75.4
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 9.5e-61 237.3 171 66.1
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 1.6e-60 236.5 178 64.0
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 3.6e-60 235.3 178 63.5
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 1.4e-59 233.4 157 72.0
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 1.2e-58 230.3 174 64.9
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 4.4e-58 228.4 129 78.3
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 7.5e-58 227.6 183 60.1
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 9.9e-58 227.3 146 70.5
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 9.9e-58 227.3 141 70.9
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 9.9e-58 227.3 157 70.1
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 1.3e-57 226.9 147 70.1
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 2.9e-57 225.7 134 74.6
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 3.7e-57 225.3 139 73.4
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 3.7e-57 225.3 139 73.4
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 4.9e-57 224.9 138 73.9
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 4.9e-57 224.9 176 63.1
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 4.9e-57 224.9 144 72.2
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 8.3e-57 224.2 173 61.3
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 8.3e-57 224.2 140 70.0
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 1.1e-56 223.8 134 76.9
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 1.4e-56 223.4 173 61.3
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 1.9e-56 223.0 173 60.7
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 3.2e-56 222.2 163 68.7
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 4.1e-56 221.9 146 69.2
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 5.4e-56 221.5 173 61.3
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.2e-55 220.3 130 75.4
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.6e-55 219.9 130 75.4
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 1.6e-55 219.9 173 60.7
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 1.6e-55 219.9 131 76.3
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 1.6e-55 219.9 142 73.9
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 2.1e-55 219.5 146 69.2
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 2.1e-55 219.5 146 69.2
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 2.7e-55 219.2 162 66.0
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 6.0e-55 218.0 173 60.1
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 1.0e-54 217.2 129 73.6
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 1.3e-54 216.9 166 60.8
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 2.3e-54 216.1 173 60.1
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 2.3e-54 216.1 152 65.8
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 2.3e-54 216.1 111 86.5
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 3.0e-54 215.7 133 72.9
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 3.0e-54 215.7 131 74.8
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 3.9e-54 215.3 147 68.0
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 5.1e-54 214.9 139 71.2
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 8.6e-54 214.2 147 70.1
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 1.1e-53 213.8 134 73.1
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 1.1e-53 213.8 132 74.2
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 1.9e-53 213.0 146 68.5
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 2.5e-53 212.6 137 70.8
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 4.3e-53 211.8 175 61.1
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 7.3e-53 211.1 127 76.4
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 9.5e-53 210.7 148 66.2
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 1.2e-52 210.3 165 61.2
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.6e-52 209.9 143 69.2
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 1.6e-52 209.9 156 64.7
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 4.7e-52 208.4 167 62.9
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 6.2e-52 208.0 157 63.7
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 6.2e-52 208.0 162 61.7
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 8.1e-52 207.6 133 73.7
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 1.4e-51 206.8 165 60.0
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 1.8e-51 206.5 129 74.4
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 2.4e-51 206.1 143 67.8
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 3.1e-51 205.7 232 49.1
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 4.0e-51 205.3 146 65.1
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 7.6e-50 201.1 130 70.8
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 9.9e-50 200.7 117 79.5
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 2.9e-49 199.1 132 68.9
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 2.9e-49 199.1 106 82.1
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 1.4e-48 196.8 136 69.1
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 1.0e-46 190.7 106 77.4
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 8.7e-46 187.6 106 75.5
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 1.9e-45 186.4 152 59.2
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 1.9e-45 186.4 102 78.4
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 7.6e-42 174.5 160 55.0
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 9.9e-42 174.1 107 69.2
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 1.2e-39 167.2 120 61.7
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 2.3e-38 162.9 108 69.4
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 6.6e-38 161.4 154 52.6
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 2.4e-35 152.9 121 58.7
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 2.6e-34 149.4 114 59.6
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 5.8e-34 148.3 206 40.3
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 8.4e-33 144.4 91 65.9
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 3.2e-32 142.5 136 53.7
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 6.7e-30 134.8 115 57.4
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 7.4e-29 131.3 134 52.2
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 1.1e-27 127.5 138 49.3
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 2.4e-27 126.3 68 83.8
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 9.0e-27 124.4 100 61.0
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 5.8e-26 121.7 89 55.1
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 2.9e-25 119.4 139 51.1
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 8.4e-25 117.9 59 83.1
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 2.4e-24 116.3 89 51.7
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 5.8e-18 95.1 89 47.2
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 1.3e-12 77.4 59 61.0
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 3.6e-07 59.3 42 59.5


User provided reference genes

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