Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003769g0120 Nicotiana tabacum HOM05D005439 ORTHO05D006793 2.6e-74 282.0 141 100.0
Peaxi162Scf00998g00023 Petunia axillaris HOM05D005439 ORTHO05D006793 2.4e-59 232.3 137 85.4
Nitab4.5_0010521g0020 Nicotiana tabacum HOM05D005439 ORTHO05D006793 3.1e-59 231.9 141 86.5
Sopen07g031460 Solanum pennellii HOM05D005439 ORTHO05D006793 6.4e-57 224.2 141 80.9
PGSC0003DMG400012454 Solanum tuberosum HOM05D005439 ORTHO05D006793 1.4e-56 223.0 141 79.4
PGSC0003DMG400001562 Solanum tuberosum HOM05D005439 ORTHO05D006793 1.9e-56 222.6 141 79.4
CAN.G162.72 Capsicum annuum HOM05D005439 ORTHO05D006793 3.2e-56 221.9 143 80.4
Solyc07g063290.3 Solanum lycopersicum HOM05D005439 ORTHO05D006793 3.3e-53 211.8 141 78.7
CSS0022813 Camellia sinensis var. sinensis HOM05D005439 ORTHO05D006793 1.0e-41 173.7 135 63.7
Rhsim04G0164900 Rhododendron simsii HOM05D005439 ORTHO05D006793 1.1e-40 170.2 123 63.4
Thecc.07G077600 Theobroma cacao HOM05D005439 ORTHO05D006793 1.9e-40 169.5 128 64.8
Manes.15G085800 Manihot esculenta HOM05D005439 ORTHO05D006793 3.2e-40 168.7 127 63.8
vmacro08610 Vaccinium macrocarpon HOM05D005439 ORTHO05D006793 1.2e-39 166.8 124 65.3
Actinidia01110 Actinidia chinensis HOM05D005439 ORTHO05D006793 1.6e-39 166.4 124 64.5
Dinv04318 Davidia involucrata HOM05D005439 ORTHO05D006793 3.5e-39 165.2 124 64.5
Gohir.D11G296600 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.0e-38 163.7 124 62.1
GSVIVG01014379001 Vitis vinifera HOM05D005439 ORTHO05D006793 1.0e-38 163.7 137 58.4
Gohir.A08G188900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.3e-38 162.5 124 62.1
Gohir.D08G040300 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.3e-38 162.5 124 62.1
Gohir.D10G173200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.3e-38 162.5 124 62.1
Gohir.D11G168400 Gossypium hirsutum HOM05D005439 ORTHO05D006793 3.9e-38 161.8 124 62.1
Gorai.007G319700 Gossypium raimondii HOM05D005439 ORTHO05D006793 3.9e-38 161.8 124 61.3
Gohir.D13G039100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 5.1e-38 161.4 124 62.1
Gohir.A05G386100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 6.7e-38 161.0 124 61.3
Oeu037221.1 Olea europaea HOM05D005439 ORTHO05D006793 6.7e-38 161.0 123 65.0
Cc04_g05330 Coffea canephora HOM05D005439 ORTHO05D006793 8.7e-38 160.6 129 62.0
COL.COLO4_09427 Corchorus olitorius HOM05D005439 ORTHO05D006793 1.9e-37 159.5 111 67.6
Gohir.A08G058200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.9e-37 159.5 124 61.3
Gohir.A11G282786 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.9e-37 159.5 130 58.5
TWI15G0142 Tripterygium wilfordii HOM05D005439 ORTHO05D006793 1.9e-37 159.5 120 64.2
Lsat_1_v5_gn_9_97261 Lactuca sativa HOM05D005439 ORTHO05D006793 2.5e-37 159.1 119 63.9
Aqoxy6G01973 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 4.3e-37 158.3 131 60.3
TAR624G0176 Trochodendron aralioides HOM05D005439 ORTHO05D006793 5.7e-37 157.9 111 67.6
CiPaw.12G120500 Carya illinoinensis HOM05D005439 ORTHO05D006793 7.4e-37 157.5 125 60.8
Duzib170G0676 Durio zibethinus HOM05D005439 ORTHO05D006793 7.4e-37 157.5 129 58.9
Lsat_1_v5_gn_9_97181 Lactuca sativa HOM05D005439 ORTHO05D006793 9.6e-37 157.1 123 62.6
PSO675G4650 Papaver somniferum HOM05D005439 ORTHO05D006793 9.6e-37 157.1 124 59.7
Aqoxy1G02538 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 1.3e-36 156.8 131 58.0
ECA240G1812 Erigeron canadensis HOM05D005439 ORTHO05D006793 1.6e-36 156.4 125 61.6
Gohir.A11G204100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.8e-36 155.6 131 58.8
CANSAT80G2923 Cannabis sativa HOM05D005439 ORTHO05D006793 3.7e-36 155.2 123 62.6
MD03G1224300 Malus domestica HOM05D005439 ORTHO05D006793 4.8e-36 154.8 127 60.6
Dinv30229 Davidia involucrata HOM05D005439 ORTHO05D006793 8.2e-36 154.1 113 65.5
Gorai.010G125600 Gossypium raimondii HOM05D005439 ORTHO05D006793 8.2e-36 154.1 124 60.5
HanXRQChr04g0095481 Helianthus annuus HOM05D005439 ORTHO05D006793 8.2e-36 154.1 124 59.7
CiPaw.08G146000 Carya illinoinensis HOM05D005439 ORTHO05D006793 1.8e-35 152.9 125 58.4
DCAR_000742 Daucus carota HOM05D005439 ORTHO05D006793 1.8e-35 152.9 117 64.1
RcHm_v2.0_Chr5g0034441 Rosa chinensis HOM05D005439 ORTHO05D006793 2.4e-35 152.5 139 55.4
TAR626G0706 Trochodendron aralioides HOM05D005439 ORTHO05D006793 2.4e-35 152.5 111 64.9
Prupe.4G185100 Prunus persica HOM05D005439 ORTHO05D006793 4.1e-35 151.8 124 58.1
Gorai.013G039600 Gossypium raimondii HOM05D005439 ORTHO05D006793 6.9e-35 151.0 124 58.9
Gorai.013G217100 Gossypium raimondii HOM05D005439 ORTHO05D006793 9.0e-35 150.6 124 58.9
Potri.011G121800 Populus trichocarpa HOM05D005439 ORTHO05D006793 1.2e-34 150.2 131 57.3
Sabra11G0107800 Salix brachista HOM05D005439 ORTHO05D006793 1.2e-34 150.2 136 56.6
Eucgr.I00444 Eucalyptus grandis HOM05D005439 ORTHO05D006793 1.5e-34 149.8 124 59.7
Gorai.012G015600 Gossypium raimondii HOM05D005439 ORTHO05D006793 2.0e-34 149.4 124 58.9
Lalb_Chr20g0109751 Lupinus albus HOM05D005439 ORTHO05D006793 3.4e-34 148.7 121 60.3
Glyma.13G278900 Glycine max HOM05D005439 ORTHO05D006793 4.5e-34 148.3 123 57.7
Cpa.g.sc53.123 Carica papaya HOM05D005439 ORTHO05D006793 5.9e-34 147.9 119 61.3
Medtr2g079590 Medicago truncatula HOM05D005439 ORTHO05D006793 5.9e-34 147.9 119 60.5
TPR.G16054 Trifolium pratense HOM05D005439 ORTHO05D006793 5.9e-34 147.9 128 57.0
Gohir.A03G006900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.7e-33 146.4 106 64.2
EL10Ac4g09544 Beta vulgaris HOM05D005439 ORTHO05D006793 2.2e-33 146.0 131 52.7
AUR62034281 Chenopodium quinoa HOM05D005439 ORTHO05D006793 2.2e-33 146.0 123 54.5
Haze_09469 Corylus avellana HOM05D005439 ORTHO05D006793 2.2e-33 146.0 128 57.8
Nn1g04026 Nelumbo nucifera HOM05D005439 ORTHO05D006793 2.9e-33 145.6 138 54.3
Lj3g0027158 Lotus japonicus HOM05D005439 ORTHO05D006793 3.8e-33 145.2 125 57.6
RcHm_v2.0_Chr6g0279991 Rosa chinensis HOM05D005439 ORTHO05D006793 5.0e-33 144.8 121 58.7
AUR62042910 Chenopodium quinoa HOM05D005439 ORTHO05D006793 1.4e-32 143.3 147 49.7
Lj1g0010486 Lotus japonicus HOM05D005439 ORTHO05D006793 5.5e-32 141.4 129 56.6
Psat5g245080 Pisum sativum HOM05D005439 ORTHO05D006793 5.5e-32 141.4 118 56.8
Atru.chr2.2728 Acer truncatum HOM05D005439 ORTHO05D006793 3.6e-31 138.7 128 54.7
Atru.chr2.2729 Acer truncatum HOM05D005439 ORTHO05D006793 3.6e-31 138.7 128 54.7
arahy.Tifrunner.gnm1.ann1.5K0R4Y Arachis hypogaea HOM05D005439 ORTHO05D006793 3.0e-30 135.6 152 46.1
Hund22944 Selenicereus undatus HOM05D005439 ORTHO05D006793 1.9e-29 132.9 130 53.8
Sc18g0002800 Simmondsia chinensis HOM05D005439 ORTHO05D006793 2.5e-29 132.5 126 55.6
FAN14G2189 Fragaria x ananassa HOM05D005439 ORTHO05D006793 4.8e-28 128.3 117 52.1
ClCG11G007090 Citrullus lanatus HOM05D005439 ORTHO05D006793 6.3e-28 127.9 110 59.1
ATR0019G055 Amborella trichopoda HOM05D005439 ORTHO05D006793 9.1e-27 124.0 112 58.0
Migut.H01926 Erythranthe guttata HOM05D005439 ORTHO05D006793 4.5e-26 121.7 131 51.9
CARHR090470 Cardamine hirsuta HOM05D005439 ORTHO05D006793 5.9e-26 121.3 134 49.3
A02p03560 Brassica napus HOM05D005439 ORTHO05D006793 1.3e-25 120.2 122 50.8
BraA02t05327Z Brassica rapa HOM05D005439 ORTHO05D006793 1.3e-25 120.2 123 51.2
Sed0007807 Sechium edule HOM05D005439 ORTHO05D006793 1.3e-25 120.2 118 54.2
MELO3C008192.2 Cucumis melo HOM05D005439 ORTHO05D006793 2.9e-25 119.0 110 56.4
MBI18_g17006_MAGBIO Magnolia biondii HOM05D005439 ORTHO05D006793 2.9e-25 119.0 127 48.8
THA.LOC104815550 Tarenaya hassleriana HOM05D005439 ORTHO05D006793 2.9e-25 119.0 134 48.5
BolC2t06755H Brassica oleracea HOM05D005439 ORTHO05D006793 1.9e-24 116.3 122 50.0
C09p60700 Brassica napus HOM05D005439 ORTHO05D006793 4.2e-24 115.2 124 50.0
Carub.0003s1515 Capsella rubella HOM05D005439 ORTHO05D006793 9.4e-24 114.0 122 51.6
C02p08370 Brassica napus HOM05D005439 ORTHO05D006793 1.6e-23 113.2 122 49.2
PGR031G3442 Punica granatum HOM05D005439 ORTHO05D006793 1.6e-23 113.2 132 49.2
Ciclev10009838m.g Citrus clementina HOM05D005439 ORTHO05D006793 2.1e-23 112.8 99 54.5
arahy.Tifrunner.gnm1.ann1.KJ06EE Arachis hypogaea HOM05D005439 ORTHO05D006793 3.6e-23 112.1 209 33.5
AT3G15420 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 4.6e-23 111.7 109 52.3
Eucgr.L03232 Eucalyptus grandis HOM05D005439 ORTHO05D006793 4.6e-23 111.7 95 56.8
unitig_32.g11156 Utricularia gibba HOM05D005439 ORTHO05D006793 4.6e-23 111.7 113 48.7
PSO541G3703 Papaver somniferum HOM05D005439 ORTHO05D006793 7.9e-23 110.9 94 55.3
Sp6g27700 Schrenkiella parvula HOM05D005439 ORTHO05D006793 7.9e-23 110.9 123 46.3
SalBow7G3564 Salvia bowleyana HOM05D005439 ORTHO05D006793 1.0e-22 110.5 122 50.0
AL3G27970 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 1.8e-22 109.8 109 52.3
BcaB08g36849 Brassica carinata HOM05D005439 ORTHO05D006793 2.3e-22 109.4 127 45.7
Gohir.D09G236700 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.3e-22 109.4 85 61.2
HPP92_001754 Vanilla planifolia HOM05D005439 ORTHO05D006793 3.0e-22 109.0 115 48.7
Aa31LG8G2660 Aethionema arabicum HOM05D005439 ORTHO05D006793 7.4e-21 104.4 119 49.6
Phvul.005G083100 Phaseolus vulgaris HOM05D005439 ORTHO05D006793 9.7e-21 104.0 118 46.6
AT1G80745 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 4.8e-20 101.7 109 48.6
Thhalv10021755m.g Eutrema salsugineum HOM05D005439 ORTHO05D006793 8.2e-20 100.9 124 46.8
Gorai.007G117500 Gossypium raimondii HOM05D005439 ORTHO05D006793 8.2e-20 100.9 85 58.8
AL2G40660 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 3.1e-19 99.0 109 49.5
Zm00001eb001470 Zea mays HOM05D005439 ORTHO05D006793 3.1e-19 99.0 122 45.1
Potri.001G402700 Populus trichocarpa HOM05D005439 ORTHO05D006793 5.3e-19 98.2 93 52.7
MD11G1243100 Malus domestica HOM05D005439 ORTHO05D006793 2.6e-18 95.9 115 42.6
Os04g0530000 Oryza sativa ssp. japonica HOM05D005439 ORTHO05D006793 2.6e-18 95.9 113 50.4
QL08p019954 Quercus lobata HOM05D005439 ORTHO05D006793 2.6e-18 95.9 72 62.5
RcHm_v2.0_Chr2g0143371 Rosa chinensis HOM05D005439 ORTHO05D006793 3.4e-18 95.5 74 62.2
TPR.G39010 Trifolium pratense HOM05D005439 ORTHO05D006793 4.5e-18 95.1 76 57.9
Gorai.004G187000 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.7e-17 93.2 68 63.2
Sed0010430 Sechium edule HOM05D005439 ORTHO05D006793 1.9e-16 89.7 93 48.4
Carub.0002s2680 Capsella rubella HOM05D005439 ORTHO05D006793 3.2e-16 89.0 61 63.9
Zm00001eb403870 Zea mays HOM05D005439 ORTHO05D006793 3.2e-16 89.0 112 45.5
Mapoly0076s0011 Marchantia polymorpha HOM05D005439 ORTHO05D006793 7.2e-16 87.8 133 42.9
BcaC03g18493 Brassica carinata HOM05D005439 ORTHO05D006793 1.0e-14 84.0 92 48.9
CDE08G1297 Ceratophyllum demersum HOM05D005439 ORTHO05D006793 3.9e-14 82.0 73 54.8
AagrBONN_evm.TU.Sc2ySwM_369.384 Anthoceros agrestis HOM05D005439 ORTHO05D006793 8.8e-14 80.9 111 42.3
VMungo1215G1396 Vigna mungo HOM05D005439 ORTHO05D006793 5.7e-13 78.2 92 45.7
Pp3c23_5480 Physcomitrium patens HOM05D005439 ORTHO05D006793 1.1e-11 73.9 109 41.3
QL08p019959 Quercus lobata HOM05D005439 ORTHO05D006793 1.2e-10 70.5 46 69.6
AUR62029363 Chenopodium quinoa HOM05D005439 ORTHO05D006793 3.8e-09 65.5 54 51.9
FAN09G1944 Fragaria x ananassa HOM05D005439 ORTHO05D006793 3.8e-09 65.5 45 66.7
FAN02G1859 Fragaria x ananassa HOM05D005439 ORTHO05D006793 5.0e-09 65.1 45 66.7
SGA_v2.0_scaffold4G02008 Striga asiatica HOM05D000346 ORTHO05D000326 8.5e-09 64.3 58 51.7
BcaC04g18875 Brassica carinata HOM05D005439 ORTHO05D006793 2.5e-08 62.8 86 43.0
BolC9t58901H Brassica oleracea HOM05D005439 ORTHO05D006793 1.2e-07 60.5 86 41.9
CsaV3_2G034140 Cucumis sativus L. HOM05D003646 ORTHO05D004503 2.1e-07 59.7 44 68.2
RcHm_v2.0_Chr5g0034431 Rosa chinensis HOM05D005439 ORTHO05D006793 1.0e-06 57.4 57 49.1
SMO293G0007 Selaginella moellendorffii HOM05D005439 ORTHO05D006793 4.0e-06 55.5 45 57.8


User provided reference genes

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