Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003768g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-66 255.0 165 100.0
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-41 172.9 159 67.3
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-39 166.8 159 78.6
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-39 166.0 157 66.2
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.1e-39 165.2 158 77.8
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.2e-39 164.1 155 82.6
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-38 163.7 159 66.0
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-38 163.3 159 70.4
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-38 163.3 159 64.8
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-38 162.5 156 65.4
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-37 158.7 159 64.2
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-36 156.0 158 78.5
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-36 155.6 159 76.7
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.3e-36 154.5 155 62.6
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.2e-35 151.4 150 63.3
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-34 148.3 159 58.5
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-34 147.9 159 61.6
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.9e-34 147.5 131 71.8
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-33 147.1 155 61.3
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-33 146.0 159 61.6
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.6e-33 144.4 150 69.3
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-32 142.5 137 61.3
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-32 141.0 137 73.0
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-32 141.0 167 65.9
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-31 138.7 140 81.4
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-31 137.9 132 66.7
Nitab4.5_0000481g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-31 137.9 155 74.8
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-30 137.1 150 58.0
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-30 136.7 137 63.5
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-30 136.3 151 58.3
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-29 134.0 162 54.3
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-29 133.7 143 60.1
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-28 129.0 159 54.7
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-27 125.9 144 56.9
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-26 123.6 149 53.7
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-26 122.9 143 56.6
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-26 121.3 157 51.0
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-26 121.3 159 55.3
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-25 119.4 158 51.9
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.6e-25 117.9 159 66.7
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-24 115.9 137 56.9
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 1.1e-23 114.0 137 50.4
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-23 113.6 107 63.6
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-23 113.6 118 61.9
Nitab4.5_0000008g0340 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-23 113.2 139 55.4
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-23 112.8 112 61.6
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-23 112.5 142 54.2
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-23 111.3 152 67.8
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-22 110.5 142 52.8
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 1.6e-22 110.2 168 43.5
Nitab4.5_0004620g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-22 109.0 122 59.0
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.0e-22 108.2 136 52.9
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-21 104.4 160 48.8
Nitab4.5_0008086g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-20 103.2 116 69.0
Nitab4.5_0000865g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.6e-20 101.7 119 58.0
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.6e-20 100.9 74 78.4
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-19 99.0 110 56.4
Nitab4.5_0003551g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-18 95.9 74 74.3
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-18 94.7 158 44.3
Nitab4.5_0004888g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.0e-18 94.4 116 54.3
CAN.G1622.3 Capsicum annuum HOM05D003911 ORTHO05D002175 2.0e-17 93.2 128 48.4
CAN.G686.12 Capsicum annuum HOM05D003911 ORTHO05D002175 4.5e-17 92.0 135 45.9
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-16 90.5 74 70.3
Nitab4.5_0002690g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-16 90.5 68 77.9
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 2.2e-16 89.7 156 41.0
CAN.G47.7 Capsicum annuum HOM05D003911 ORTHO05D002175 4.9e-16 88.6 123 43.9
CAN.G141.3 Capsicum annuum HOM05D003911 ORTHO05D002175 6.4e-16 88.2 138 42.0
Nitab4.5_0009292g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.4e-16 88.2 71 71.8
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 1.1e-15 87.4 159 42.1
Nitab4.5_0007148g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-15 86.7 147 45.6
Nitab4.5_0000169g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-15 85.5 118 64.4
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.5e-15 85.1 148 41.2
Nitab4.5_0003336g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-15 85.1 59 81.4
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-14 82.4 162 40.7
Nitab4.5_0000030g0290 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-13 80.9 59 74.6
Nitab4.5_0000394g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-13 80.9 74 66.2
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-13 80.9 137 41.6
Nitab4.5_0000014g0360 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-13 80.5 70 67.1
Nitab4.5_0004222g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-13 79.3 127 57.5
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-13 78.2 168 38.1
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-13 77.8 116 46.6
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 1.1e-12 77.4 147 38.8
Nitab4.5_0000722g0130 Nicotiana tabacum HOM05D003911 ORTHO05D010997 1.5e-12 77.0 57 75.4
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-12 77.0 151 39.7
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.5e-12 77.0 160 38.1
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-12 77.0 127 43.3
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.4e-12 74.7 143 41.3
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.4e-12 74.7 151 38.4
Nitab4.5_0000238g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-11 73.6 52 75.0
CAN.G146.8 Capsicum annuum HOM05D003911 ORTHO05D002175 8.1e-11 71.2 151 35.8
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.1e-11 71.2 140 37.1
Nitab4.5_0000030g0180 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.1e-11 71.2 55 74.5
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.1e-11 71.2 160 40.0
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-10 68.9 169 32.5
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.3e-10 68.6 151 35.1
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.3e-10 68.6 151 42.4
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.0e-10 67.8 168 33.3
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.2e-09 67.4 144 36.1
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-09 66.6 170 45.9
Nitab4.5_0018043g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-09 66.6 64 62.5
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 2.6e-09 66.2 166 34.9
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.4e-09 65.9 151 35.1
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.4e-09 65.9 144 36.1
CAN.G1243.2 Capsicum annuum HOM05D003911 ORTHO05D002175 4.5e-09 65.5 119 40.3
CAN.G2762.1 Capsicum annuum HOM05D003911 ORTHO05D002175 4.5e-09 65.5 119 40.3
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-09 65.5 164 35.4
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.8e-09 65.1 164 34.8
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 5.8e-09 65.1 151 35.1
Nitab4.5_0000913g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.6e-09 64.7 154 37.0
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 7.6e-09 64.7 140 35.0
CAN.G43.13 Capsicum annuum HOM05D003911 ORTHO05D002175 1.0e-08 64.3 161 31.7
CAN.G1050.1 Capsicum annuum HOM05D003911 ORTHO05D002175 1.3e-08 63.9 76 50.0
CAN.G267.2 Capsicum annuum HOM05D003911 ORTHO05D002175 1.7e-08 63.5 117 36.8
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-08 63.5 135 37.8
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-08 63.2 180 34.4
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 2.9e-08 62.8 164 34.8
Sopen06g006900 Solanum pennellii HOM05D003911 ORTHO05D002175 3.8e-08 62.4 119 37.8
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.8e-08 62.4 144 34.7
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-08 61.2 144 35.4
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 8.4e-08 61.2 144 34.7
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-07 60.8 151 34.4
CAN.G264.19 Capsicum annuum HOM05D003911 ORTHO05D002175 1.4e-07 60.5 69 44.9
Nitab4.5_0000142g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-07 60.5 149 51.0
Nitab4.5_0000199g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-07 60.5 101 44.6
Solyc07g032130.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 1.4e-07 60.5 95 41.1
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.4e-07 60.5 184 30.4
Nitab4.5_0006058g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-07 59.7 53 67.9
Solyc10g038140.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 2.5e-07 59.7 105 39.0
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-07 58.9 142 50.0
Nitab4.5_0005379g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-07 58.5 165 33.3
CAN.G643.10 Capsicum annuum HOM05D003911 ORTHO05D002175 1.2e-06 57.4 93 39.8
Nitab4.5_0000262g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-06 57.4 65 60.0
Nitab4.5_0003295g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-06 57.0 140 34.3
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-06 56.6 159 34.0
Nitab4.5_0007225g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-06 56.6 147 51.0
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-06 56.2 156 30.1
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-06 55.8 158 31.6
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-06 55.8 168 30.4
Nitab4.5_0005260g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-06 55.5 59 54.2
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 6.0e-06 55.1 164 32.3


User provided reference genes

Program Settings