Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003763g0070 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.9e-84 314.7 153 100.0
Nitab4.5_0002269g0040 Nicotiana tabacum HOM05D008381 ORTHO05D004636 6.8e-20 101.3 115 47.8
Nitab4.5_0001119g0130 Nicotiana tabacum HOM05D008381 ORTHO05D004636 9.8e-19 97.4 169 35.5
Peaxi162Scf00464g00024 Petunia axillaris HOM05D008381 ORTHO05D004636 1.2e-16 90.5 125 40.8
Solyc05g039970.1 Solanum lycopersicum HOM05D008381 ORTHO05D004636 2.1e-16 89.7 169 33.7
Nitab4.5_0009177g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.0e-15 87.4 89 53.9
Nitab4.5_0001319g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.3e-15 87.0 163 35.0
Peaxi162Scf00170g00710 Petunia axillaris HOM05D005774 ORTHO05D006516 1.7e-15 86.7 159 35.2
Nitab4.5_0000574g0180 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.3e-15 86.3 135 37.0
Nitab4.5_0002028g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.3e-15 86.3 143 35.7
PGSC0003DMG400014015 Solanum tuberosum HOM05D008381 ORTHO05D004636 3.9e-15 85.5 132 37.1
Nitab4.5_0000643g0030 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.5e-14 83.6 145 37.2
Nitab4.5_0002968g0010 Nicotiana tabacum HOM05D008381 ORTHO05D004636 4.3e-14 82.0 86 51.2
Nitab4.5_0001032g0100 Nicotiana tabacum HOM05D008381 ORTHO05D004636 5.6e-14 81.6 143 35.0
Peaxi162Scf00019g01511 Petunia axillaris HOM05D008381 ORTHO05D004636 9.5e-14 80.9 148 32.4
Nitab4.5_0000197g0070 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.6e-13 80.1 163 32.5
Nitab4.5_0001115g0120 Nicotiana tabacum HOM05D012456 ORTHO05D000022 8.1e-13 77.8 161 32.3
Nitab4.5_0002611g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000022 8.1e-13 77.8 128 37.5
Nitab4.5_0004988g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.1e-12 77.4 157 33.8
PGSC0003DMG400006521 Solanum tuberosum HOM05D008381 ORTHO05D004636 1.4e-12 77.0 148 31.1
Nitab4.5_0002972g0040 Nicotiana tabacum HOM05D012456 ORTHO05D004636 5.2e-12 75.1 161 32.9
QL03p010769 Quercus lobata HOM05D000155 ORTHO05D000022 1.5e-11 73.6 147 31.3
Nitab4.5_0026829g0010 Nicotiana tabacum HOM05D008306 ORTHO05D004636 2.6e-11 72.8 122 32.8
Peaxi162Scf00794g00315 Petunia axillaris HOM05D005774 ORTHO05D006516 3.4e-11 72.4 141 30.5
CSS0009143 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 7.6e-11 71.2 138 31.2
CSS0032125 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.6e-11 71.2 131 32.8
Nitab4.5_0004123g0040 Nicotiana tabacum HOM05D008306 ORTHO05D004636 7.6e-11 71.2 148 32.4
Actinidia24692 Actinidia chinensis HOM05D000155 ORTHO05D000022 1.3e-10 70.5 164 29.9
Actinidia31778 Actinidia chinensis HOM05D000155 ORTHO05D000022 1.7e-10 70.1 163 29.4
Nitab4.5_0000685g0060 Nicotiana tabacum HOM05D008306 ORTHO05D004636 1.7e-10 70.1 112 37.5
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 3.8e-10 68.9 164 30.5
CAN.G681.24 Capsicum annuum HOM05D000016 ORTHO05D000109 8.4e-10 67.8 150 32.7
PGSC0003DMG400029619 Solanum tuberosum HOM05D008381 ORTHO05D004636 1.1e-09 67.4 88 40.9
Cpa.g.sc19.281 Carica papaya HOM05D000003 ORTHO05D000022 1.4e-09 67.0 139 30.2
Nitab4.5_0004325g0080 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.4e-09 67.0 90 42.2
Nitab4.5_0004734g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000022 2.4e-09 66.2 157 29.3
Nitab4.5_0002189g0010 Nicotiana tabacum HOM05D000067 ORTHO05D004636 4.1e-09 65.5 126 36.5
QL01p007248 Quercus lobata HOM05D000003 ORTHO05D000022 5.4e-09 65.1 148 27.7
Nitab4.5_0000163g0160 Nicotiana tabacum HOM05D008381 ORTHO05D004636 7.1e-09 64.7 101 37.6
Peaxi162Scf00422g00049 Petunia axillaris HOM05D005774 ORTHO05D006516 7.1e-09 64.7 115 34.8
Nitab4.5_0000297g0200 Nicotiana tabacum HOM05D008381 ORTHO05D004636 9.2e-09 64.3 58 46.6
Peaxi162Scf00842g00432 Petunia axillaris HOM05D005774 ORTHO05D006516 9.2e-09 64.3 125 32.8
Peaxi162Scf00100g00073 Petunia axillaris HOM05D008381 ORTHO05D004636 1.2e-08 63.9 108 35.2
Peaxi162Scf00000g56011 Petunia axillaris HOM05D008306 ORTHO05D004636 1.6e-08 63.5 70 47.1
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 2.1e-08 63.2 168 29.2
CSS0047653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.7e-08 62.8 143 31.5
QL01p016208 Quercus lobata HOM05D000155 ORTHO05D000022 2.7e-08 62.8 143 30.1
QL01p016211 Quercus lobata HOM05D000155 ORTHO05D000022 2.7e-08 62.8 143 30.1
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-08 62.4 143 27.3
Nitab4.5_0001151g0080 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.5e-08 62.4 64 42.2
Nitab4.5_0003182g0080 Nicotiana tabacum HOM05D008306 ORTHO05D004636 3.5e-08 62.4 98 34.7
QL09p016348 Quercus lobata HOM05D000155 ORTHO05D000022 3.5e-08 62.4 162 28.4
Nitab4.5_0006529g0030 Nicotiana tabacum HOM05D014783 ORTHO05D004636 6.0e-08 61.6 140 31.4
Nitab4.5_0001962g0120 Nicotiana tabacum HOM05D000003 ORTHO05D000022 7.8e-08 61.2 157 31.2
Atru.chr5.2238 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-07 60.8 123 34.1
Nitab4.5_0000411g0070 Nicotiana tabacum HOM05D000003 ORTHO05D004636 1.0e-07 60.8 138 31.2
Nitab4.5_0001468g0150 Nicotiana tabacum HOM05D008381 ORTHO05D004636 1.0e-07 60.8 86 40.7
QL01p016224 Quercus lobata HOM05D000155 ORTHO05D000022 1.0e-07 60.8 143 29.4
QL01p018268 Quercus lobata HOM05D000155 ORTHO05D000022 1.0e-07 60.8 146 30.1
Atru.chr6.1037 Acer truncatum HOM05D000003 ORTHO05D000022 1.3e-07 60.5 140 29.3
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-07 60.1 168 27.4
Nitab4.5_0000640g0160 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.7e-07 60.1 120 30.0
Nitab4.5_0010848g0020 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.3e-07 59.7 107 34.6
QL10p064615 Quercus lobata HOM05D000155 ORTHO05D000022 2.3e-07 59.7 141 25.5
Nitab4.5_0004525g0080 Nicotiana tabacum HOM05D009389 ORTHO05D012243 3.9e-07 58.9 120 33.3
Nitab4.5_0016171g0010 Nicotiana tabacum HOM05D008381 ORTHO05D004636 3.9e-07 58.9 73 42.5
Sopen10g006600 Solanum pennellii HOM05D000003 ORTHO05D001349 3.9e-07 58.9 143 28.0
Nitab4.5_0008516g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 5.1e-07 58.5 49 49.0
RcHm_v2.0_Chr1g0351011 Rosa chinensis HOM05D000003 ORTHO05D000004 6.6e-07 58.2 139 30.2
Nitab4.5_0003252g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 8.6e-07 57.8 119 28.6
Peaxi162Scf00022g00105 Petunia axillaris HOM05D005774 ORTHO05D004636 8.6e-07 57.8 111 33.3
Actinidia31833 Actinidia chinensis HOM05D000155 ORTHO05D000022 1.1e-06 57.4 85 37.6
CAN.G1264.3 Capsicum annuum HOM05D002076 ORTHO05D002087 1.5e-06 57.0 131 29.8
Nitab4.5_0004274g0020 Nicotiana tabacum HOM05D009389 ORTHO05D004636 1.5e-06 57.0 118 29.7
Nitab4.5_0007388g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000022 1.5e-06 57.0 136 30.9
Atru.chr1.1754 Acer truncatum HOM05D000003 ORTHO05D000022 1.9e-06 56.6 128 28.9
Nitab4.5_0000780g0130 Nicotiana tabacum HOM05D012456 ORTHO05D000022 1.9e-06 56.6 145 30.3
Atru.chr2.669 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-06 56.2 147 28.6
Lj1P688T36 Lonicera japonica HOM05D000155 ORTHO05D000022 2.5e-06 56.2 139 26.6
Nitab4.5_0001684g0080 Nicotiana tabacum HOM05D008306 ORTHO05D004636 2.5e-06 56.2 85 32.9
Nitab4.5_0002978g0080 Nicotiana tabacum HOM05D008381 ORTHO05D004636 2.5e-06 56.2 55 52.7
Lj1P685T53 Lonicera japonica HOM05D000155 ORTHO05D000022 3.3e-06 55.8 139 28.1
Nitab4.5_0001728g0090 Nicotiana tabacum HOM05D014783 ORTHO05D004636 3.3e-06 55.8 103 35.9
Peaxi162Scf00049g00029 Petunia axillaris HOM05D005774 ORTHO05D006516 3.3e-06 55.8 77 41.6
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 4.3e-06 55.5 145 28.3
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 4.3e-06 55.5 150 28.7
Atru.chr9.658 Acer truncatum HOM05D000003 ORTHO05D000022 4.3e-06 55.5 140 28.6
Nitab4.5_0000925g0050 Nicotiana tabacum HOM05D008381 ORTHO05D004636 4.3e-06 55.5 125 32.0
Nitab4.5_0002346g0070 Nicotiana tabacum HOM05D011052 ORTHO05D004636 4.3e-06 55.5 133 28.6
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.6e-06 55.1 141 30.5
Solyc07g056380.1 Solanum lycopersicum HOM05D000003 ORTHO05D000022 5.6e-06 55.1 146 27.4
Atru.chr12.385 Acer truncatum HOM05D000003 ORTHO05D000022 7.3e-06 54.7 161 29.2
FvH4_6g18164 Fragaria vesca HOM05D000003 ORTHO05D000022 7.3e-06 54.7 139 30.2
Lj1P687T17 Lonicera japonica HOM05D000155 ORTHO05D000022 7.3e-06 54.7 137 28.5
SHI43336 Sapria himalayana HOM05D000024 ORTHO05D000007 7.3e-06 54.7 141 29.8
Atru.chr4.1844 Acer truncatum HOM05D000003 ORTHO05D000022 9.6e-06 54.3 136 27.9
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.6e-06 54.3 143 27.3


User provided reference genes

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