Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.1e-33 146.0 69 100.0
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 9.9e-27 122.9 64 90.6
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 3.8e-26 120.9 64 89.1
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 2.1e-21 105.1 64 79.7
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 2.8e-21 104.8 64 78.1
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 1.5e-19 99.0 65 73.8
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 6.4e-18 93.6 62 67.7
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 1.1e-17 92.8 62 66.1
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 1.4e-17 92.4 63 66.7
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 4.2e-17 90.9 64 65.6
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 7.1e-17 90.1 65 70.8
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 9.3e-17 89.7 63 66.7
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.6e-16 89.0 62 64.5
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.7e-16 88.2 64 70.3
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 2.7e-16 88.2 64 64.1
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 4.6e-16 87.4 64 60.9
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 4.6e-16 87.4 62 62.9
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 4.6e-16 87.4 62 62.9
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 6.0e-16 87.0 62 61.3
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 7.8e-16 86.7 62 59.7
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 7.8e-16 86.7 63 65.1
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 1.0e-15 86.3 60 66.7
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 1.0e-15 86.3 67 65.7
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.7e-15 85.5 64 64.1
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 2.3e-15 85.1 65 64.6
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 2.3e-15 85.1 67 64.2
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 2.3e-15 85.1 58 63.8
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 3.0e-15 84.7 60 63.3
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 8.7e-15 83.2 63 63.5
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.5e-14 82.4 64 62.5
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 1.5e-14 82.4 64 62.5
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 1.9e-14 82.0 58 65.5
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 1.9e-14 82.0 62 62.9
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 3.3e-14 81.3 62 59.7
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 3.3e-14 81.3 63 61.9
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 3.3e-14 81.3 59 62.7
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 3.3e-14 81.3 59 62.7
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 4.3e-14 80.9 63 60.3
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 4.3e-14 80.9 63 60.3
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 4.3e-14 80.9 63 58.7
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 5.6e-14 80.5 58 60.3
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 7.3e-14 80.1 62 61.3
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 7.3e-14 80.1 62 62.9
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 7.3e-14 80.1 63 58.7
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 9.6e-14 79.7 61 60.7
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 1.3e-13 79.3 56 60.7
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 1.6e-13 79.0 64 57.8
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 2.1e-13 78.6 64 59.4
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 2.8e-13 78.2 63 57.1
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 2.8e-13 78.2 59 62.7
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 2.8e-13 78.2 63 63.5
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 2.8e-13 78.2 62 61.3
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 2.8e-13 78.2 62 61.3
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 3.6e-13 77.8 64 56.2
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 4.8e-13 77.4 58 62.1
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 4.8e-13 77.4 63 61.9
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 4.8e-13 77.4 42 83.3
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 6.2e-13 77.0 63 55.6
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 6.2e-13 77.0 61 57.4
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 8.1e-13 76.6 64 57.8
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 8.1e-13 76.6 58 60.3
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 8.1e-13 76.6 64 60.9
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 8.1e-13 76.6 65 58.5
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 8.1e-13 76.6 57 63.2
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 1.1e-12 76.3 64 59.4
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 1.4e-12 75.9 64 56.2
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 1.8e-12 75.5 65 56.9
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 4.0e-12 74.3 58 62.1
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 4.0e-12 74.3 58 58.6
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 5.3e-12 73.9 58 60.3
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 5.3e-12 73.9 64 53.1
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 5.3e-12 73.9 53 62.3
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 6.9e-12 73.6 57 61.4
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 6.9e-12 73.6 55 60.0
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 1.2e-11 72.8 55 61.8
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 2.0e-11 72.0 63 58.7
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 5.8e-11 70.5 62 54.8
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 5.8e-11 70.5 63 50.8
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 5.8e-11 70.5 57 56.1
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 1.3e-10 69.3 56 53.6
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 1.7e-10 68.9 64 57.8
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.7e-10 68.9 57 54.4
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 3.8e-10 67.8 64 54.7
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 3.8e-10 67.8 66 50.0
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 6.4e-10 67.0 64 50.0
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 1.1e-09 66.2 58 51.7
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 1.4e-09 65.9 64 48.4
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 1.4e-09 65.9 63 50.8
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 2.4e-09 65.1 58 56.9
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 5.4e-09 63.9 45 60.0
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 7.1e-09 63.5 61 47.5
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 7.1e-09 63.5 61 47.5
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 7.1e-09 63.5 61 47.5
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 9.3e-09 63.2 61 47.5
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 2.1e-08 62.0 61 47.5
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 3.5e-08 61.2 49 55.1
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 3.5e-08 61.2 64 45.3
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 4.6e-08 60.8 63 47.6
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 4.6e-08 60.8 63 47.6
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 6.0e-08 60.5 64 43.8
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 6.0e-08 60.5 64 45.3
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 6.0e-08 60.5 64 45.3
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 1.0e-07 59.7 39 74.4
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.9e-06 55.5 63 44.4
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 2.5e-06 55.1 63 44.4
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 2.5e-06 55.1 53 45.3


User provided reference genes

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