Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 1.7e-44 182.2 87 100.0
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 1.4e-41 172.6 87 94.3
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 1.5e-40 169.1 84 92.9
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 7.0e-38 160.2 84 88.1
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 7.0e-38 160.2 84 88.1
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 1.5e-35 152.5 91 75.8
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 3.3e-35 151.4 83 81.9
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 3.3e-35 151.4 83 80.7
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 7.3e-35 150.2 91 74.7
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 1.2e-34 149.4 87 79.3
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 1.6e-34 149.1 91 74.7
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 1.6e-34 149.1 91 76.9
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 2.1e-34 148.7 83 77.1
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 2.1e-34 148.7 83 78.3
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 2.1e-34 148.7 91 74.7
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 2.1e-34 148.7 82 80.5
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 2.1e-34 148.7 83 81.9
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 2.8e-34 148.3 83 80.7
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 2.8e-34 148.3 91 74.7
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 3.6e-34 147.9 83 79.5
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 4.7e-34 147.5 91 74.7
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 6.2e-34 147.1 91 74.7
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 8.0e-34 146.7 83 77.1
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 1.4e-33 146.0 85 75.3
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 1.4e-33 146.0 85 75.3
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 1.4e-33 146.0 83 77.1
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 1.4e-33 146.0 83 77.1
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 2.3e-33 145.2 83 77.1
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 2.3e-33 145.2 83 77.1
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 3.1e-33 144.8 83 75.9
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 3.1e-33 144.8 90 73.3
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 4.0e-33 144.4 90 72.2
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 8.9e-33 143.3 91 70.3
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 1.5e-32 142.5 91 72.5
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 1.5e-32 142.5 91 70.3
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 2.0e-32 142.1 91 70.3
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 2.0e-32 142.1 91 69.2
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 2.0e-32 142.1 91 71.4
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.0e-32 142.1 91 71.4
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.0e-32 142.1 91 71.4
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.0e-32 142.1 91 70.3
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 2.0e-32 142.1 91 71.4
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 2.0e-32 142.1 91 71.4
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 2.0e-32 142.1 91 72.5
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 2.6e-32 141.7 91 70.3
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 2.6e-32 141.7 83 72.3
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 3.4e-32 141.4 88 73.9
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 5.8e-32 140.6 91 71.4
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 7.5e-32 140.2 83 73.5
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 7.5e-32 140.2 88 76.1
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 7.5e-32 140.2 91 72.5
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 7.5e-32 140.2 91 72.5
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 9.8e-32 139.8 91 70.3
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 9.8e-32 139.8 85 75.3
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 1.7e-31 139.0 91 71.4
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 3.7e-31 137.9 83 73.5
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 3.7e-31 137.9 88 70.5
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 4.9e-31 137.5 89 73.0
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.1e-30 136.3 91 69.2
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 1.1e-30 136.3 83 75.9
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 1.4e-30 136.0 85 68.2
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 2.4e-30 135.2 83 73.5
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 3.2e-30 134.8 91 71.4
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 3.2e-30 134.8 83 71.1
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 3.2e-30 134.8 88 69.3
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 4.1e-30 134.4 84 70.2
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 5.4e-30 134.0 82 72.0
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 5.4e-30 134.0 91 68.1
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 7.0e-30 133.7 80 71.2
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 9.2e-30 133.3 83 68.7
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 1.6e-29 132.5 82 73.2
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 1.6e-29 132.5 89 68.5
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 1.6e-29 132.5 83 69.9
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 1.6e-29 132.5 85 71.8
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 2.1e-29 132.1 83 69.9
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 3.5e-29 131.3 87 70.1
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 3.5e-29 131.3 91 65.9
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 4.6e-29 131.0 83 69.9
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 4.6e-29 131.0 85 70.6
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 7.8e-29 130.2 92 67.4
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 1.3e-28 129.4 86 69.8
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 1.7e-28 129.0 83 68.7
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 1.7e-28 129.0 83 68.7
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 1.7e-28 129.0 91 64.8
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 1.7e-28 129.0 91 64.8
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 1.7e-28 129.0 91 64.8
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 1.7e-28 129.0 91 64.8
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 1.7e-28 129.0 91 64.8
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 2.3e-28 128.6 90 65.6
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 3.0e-28 128.3 87 69.0
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 3.0e-28 128.3 91 65.9
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 8.6e-28 126.7 87 65.5
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 8.6e-28 126.7 83 69.9
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 1.1e-27 126.3 86 67.4
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 1.1e-27 126.3 91 63.7
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 1.9e-27 125.6 91 65.9
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 1.9e-27 125.6 91 65.9
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 1.9e-27 125.6 91 65.9
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 1.9e-27 125.6 91 65.9
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.9e-27 125.6 91 64.8
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 3.3e-27 124.8 91 60.4
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.3e-27 124.4 87 66.7
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.3e-27 124.4 87 66.7
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.3e-27 124.4 87 66.7
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 4.3e-27 124.4 91 62.6
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 4.3e-27 124.4 83 67.5
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 5.6e-27 124.0 91 63.7
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 5.6e-27 124.0 91 63.7
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 7.3e-27 123.6 91 63.7
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 9.5e-27 123.2 90 63.3
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.6e-26 122.5 82 68.3
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 2.1e-26 122.1 91 61.5
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 2.8e-26 121.7 85 62.4
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 4.7e-26 120.9 83 63.9
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.7e-26 120.9 87 64.4
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 4.7e-26 120.9 82 67.1
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 5.2e-25 117.5 90 62.2
ECA247G2100 Erigeron canadensis HOM05D004945 ORTHO05D005536 5.4e-22 107.5 78 62.8
Dinv25512 Davidia involucrata HOM05D004945 ORTHO05D005536 1.3e-20 102.8 66 71.2
THA.LOC109116878 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.7e-20 102.4 62 75.8
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 2.3e-20 102.1 80 57.5
BcaB03g15243 Brassica carinata HOM05D004945 ORTHO05D005536 1.5e-19 99.4 75 60.0
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 7.3e-19 97.1 80 58.8
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 6.2e-18 94.0 45 100.0
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 2.4e-17 92.0 57 70.2
Nitab4.5_0000617g0120 Nicotiana tabacum HOM05D004945 ORTHO05D005536 5.2e-17 90.9 52 76.9
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 9.9e-16 86.7 60 61.7
PGSC0003DMG400028757 Solanum tuberosum HOM05D004945 ORTHO05D005536 2.2e-15 85.5 49 75.5
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 3.5e-13 78.2 64 57.8
SMO361G0023 Selaginella moellendorffii HOM05D004945 ORTHO05D005536 3.9e-12 74.7 82 41.5
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 8.7e-12 73.6 44 70.5
Oeu001819.1 Olea europaea HOM05D004945 ORTHO05D005536 3.3e-11 71.6 71 50.7
arahy.Tifrunner.gnm1.ann1.2FH55K Arachis hypogaea HOM05D004945 ORTHO05D005536 5.6e-11 70.9 52 61.5
arahy.Tifrunner.gnm1.ann1.U71V3Q Arachis hypogaea HOM05D004945 ORTHO05D005536 5.6e-11 70.9 52 61.5
Dinv24096 Davidia involucrata HOM05D019947 ORTHO05D005536 6.9e-09 63.9 43 62.8
Dinv44937 Davidia involucrata HOM05D004945 ORTHO05D005536 6.9e-09 63.9 43 62.8
BcaC09g51779 Brassica carinata HOM05D004945 ORTHO05D005536 9.0e-09 63.5 71 43.7
BcaNung06654 Brassica carinata HOM05D004945 ORTHO05D005536 9.0e-09 63.5 71 43.7
Pp3c25_5460 Physcomitrium patens HOM05D004945 ORTHO05D005536 7.6e-08 60.5 75 40.0
Pp3c25_5480 Physcomitrium patens HOM05D004945 ORTHO05D005536 7.6e-08 60.5 75 40.0
AagrBONN_evm.TU.Sc2ySwM_344.4974 Anthoceros agrestis HOM05D004945 ORTHO05D005536 1.3e-07 59.7 82 35.4
CBR_g50842 Chara braunii HOM05D004945 ORTHO05D005536 1.7e-07 59.3 75 40.0
AagrBONN_evm.TU.Sc2ySwM_228.1937 Anthoceros agrestis HOM05D004945 ORTHO05D005536 8.4e-07 57.0 75 36.0
Pp3c5_15280 Physcomitrium patens HOM05D004945 ORTHO05D005536 3.2e-06 55.1 82 30.5


User provided reference genes

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