Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003757g0060 Nicotiana tabacum HOM05D005569 ORTHO05D007052 3.7e-106 388.3 203 100.0
Nitab4.5_0002354g0080 Nicotiana tabacum HOM05D005569 ORTHO05D007052 2.1e-72 276.2 150 95.3
PGSC0003DMG400026509 Solanum tuberosum HOM05D005569 ORTHO05D007052 2.6e-59 232.6 147 82.3
Nitab4.5_0001708g0020 Nicotiana tabacum HOM05D005569 ORTHO05D007052 4.9e-58 228.4 148 85.1
Sopen06g022820 Solanum pennellii HOM05D005569 ORTHO05D007052 6.4e-58 228.0 147 80.3
PGSC0003DMG400001840 Solanum tuberosum HOM05D005569 ORTHO05D007052 1.4e-57 226.9 148 83.8
Solyc08g077470.4 Solanum lycopersicum HOM05D005569 ORTHO05D007052 1.2e-56 223.8 148 81.8
Nitab4.5_0007226g0010 Nicotiana tabacum HOM05D005569 ORTHO05D007052 2.1e-56 223.0 148 83.8
Sopen08g026060 Solanum pennellii HOM05D005569 ORTHO05D007052 4.6e-56 221.9 148 81.8
CAN.G1445.2 Capsicum annuum HOM05D005569 ORTHO05D007052 6.0e-56 221.5 148 83.1
CAN.G308.17 Capsicum annuum HOM05D005569 ORTHO05D007052 1.1e-54 217.2 159 73.0
Hma1.2p1_1111F.1_g258450 Hydrangea macrophylla HOM05D005569 ORTHO05D007052 2.4e-52 209.5 139 77.7
FAN02G3798 Fragaria x ananassa HOM05D005569 ORTHO05D007052 5.3e-52 208.4 164 68.9
Nn8g41003 Nelumbo nucifera HOM05D005569 ORTHO05D007052 1.2e-51 207.2 121 84.3
HanXRQChr10g0311221 Helianthus annuus HOM05D005569 ORTHO05D007052 2.0e-51 206.5 161 71.4
Lsat_1_v5_gn_5_137201 Lactuca sativa HOM05D005569 ORTHO05D007052 2.0e-51 206.5 149 72.5
HanXRQChr12g0359721 Helianthus annuus HOM05D005569 ORTHO05D007052 3.4e-51 205.7 150 70.0
ECA234G1813 Erigeron canadensis HOM05D005569 ORTHO05D007052 9.9e-51 204.1 121 83.5
TAR626G0082 Trochodendron aralioides HOM05D005569 ORTHO05D007052 9.9e-51 204.1 145 73.8
ClCG09G020780 Citrullus lanatus HOM05D005569 ORTHO05D007052 2.9e-50 202.6 169 63.9
Ciclev10032913m.g Citrus clementina HOM05D005569 ORTHO05D007052 4.9e-50 201.8 142 73.2
Actinidia00647 Actinidia chinensis HOM05D005569 ORTHO05D007052 8.4e-50 201.1 119 85.7
CDE07G0675 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 8.4e-50 201.1 142 71.1
CDE04G0659 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 1.4e-49 200.3 121 81.0
MELO3C002923.2 Cucumis melo HOM05D005569 ORTHO05D007052 1.4e-49 200.3 155 66.5
CsaV3_5G025600 Cucumis sativus L. HOM05D005569 ORTHO05D007052 2.4e-49 199.5 155 65.8
Lj6P639T26 Lonicera japonica HOM05D005569 ORTHO05D007052 2.4e-49 199.5 117 85.5
arahy.Tifrunner.gnm1.ann1.DT0EHL Arachis hypogaea HOM05D005569 ORTHO05D007052 4.2e-49 198.7 137 73.7
Eucgr.J00350 Eucalyptus grandis HOM05D005569 ORTHO05D007052 4.2e-49 198.7 121 81.0
Lj3g0021821 Lotus japonicus HOM05D005569 ORTHO05D007052 4.2e-49 198.7 164 62.8
GSVIVG01029554001 Vitis vinifera HOM05D005569 ORTHO05D007052 4.2e-49 198.7 121 81.0
arahy.Tifrunner.gnm1.ann1.0XD544 Arachis hypogaea HOM05D005569 ORTHO05D007052 5.4e-49 198.4 137 73.7
vmacro12582 Vaccinium macrocarpon HOM05D005569 ORTHO05D007052 5.4e-49 198.4 119 84.9
FvH4_6g36900 Fragaria vesca HOM05D005569 ORTHO05D007052 7.1e-49 198.0 134 76.9
FAN14G0087 Fragaria x ananassa HOM05D000810 ORTHO05D003737 7.1e-49 198.0 134 76.9
PSO170G0292 Papaver somniferum HOM05D005569 ORTHO05D007052 7.1e-49 198.0 150 67.3
Aqoxy7G02714 Aquilegia oxysepala HOM05D005569 ORTHO05D007052 9.3e-49 197.6 121 81.0
Sed0017383 Sechium edule HOM05D005569 ORTHO05D007052 9.3e-49 197.6 162 64.2
PSO063G3520 Papaver somniferum HOM05D005569 ORTHO05D007052 1.2e-48 197.2 150 67.3
Prupe.3G023400 Prunus persica HOM05D005569 ORTHO05D007052 1.6e-48 196.8 158 67.7
Oeu049628.2 Olea europaea HOM05D005569 ORTHO05D007052 2.1e-48 196.4 135 71.9
RcHm_v2.0_Chr2g0149331 Rosa chinensis HOM05D005569 ORTHO05D007052 2.7e-48 196.1 147 70.1
HPP92_023863 Vanilla planifolia HOM05D005569 ORTHO05D007052 2.7e-48 196.1 121 78.5
FAN09G0120 Fragaria x ananassa HOM05D005569 ORTHO05D007052 3.5e-48 195.7 134 75.4
Sc15g0001130 Simmondsia chinensis HOM05D005569 ORTHO05D007052 3.5e-48 195.7 137 73.7
MD17G1161700 Malus domestica HOM05D005569 ORTHO05D007052 1.0e-47 194.1 129 76.7
CiPaw.01G208600 Carya illinoinensis HOM05D005569 ORTHO05D007052 1.3e-47 193.7 131 74.0
CSS0046788 Camellia sinensis var. sinensis HOM05D005569 ORTHO05D007052 1.7e-47 193.4 117 82.9
Ca_20982_v3 Cicer arietinum L. HOM05D005569 ORTHO05D007052 1.7e-47 193.4 143 68.5
MD09G1166000 Malus domestica HOM05D005569 ORTHO05D007052 1.7e-47 193.4 129 75.2
Psat7g265160 Pisum sativum HOM05D005569 ORTHO05D007052 1.7e-47 193.4 145 69.7
Manes.06G179601 Manihot esculenta HOM05D005569 ORTHO05D007052 3.0e-47 192.6 136 73.5
AUR62025672 Chenopodium quinoa HOM05D005569 ORTHO05D007052 6.6e-47 191.4 119 79.0
COL.COLO4_31145 Corchorus olitorius HOM05D000810 ORTHO05D003737 8.7e-47 191.0 163 62.6
Hund05672 Selenicereus undatus HOM05D005569 ORTHO05D007052 8.7e-47 191.0 119 78.2
Gohir.D05G115300 Gossypium hirsutum HOM05D005569 ORTHO05D007052 1.1e-46 190.7 138 72.5
Gorai.009G119400 Gossypium raimondii HOM05D005569 ORTHO05D007052 1.1e-46 190.7 138 72.5
TPR.G38774 Trifolium pratense HOM05D005569 ORTHO05D007052 1.1e-46 190.7 162 61.7
Gohir.A05G114900 Gossypium hirsutum HOM05D005569 ORTHO05D007052 1.9e-46 189.9 136 72.8
Medtr4g005340 Medicago truncatula HOM05D005569 ORTHO05D007052 3.3e-46 189.1 179 58.1
Thecc.06G056000 Theobroma cacao HOM05D005569 ORTHO05D007052 3.3e-46 189.1 136 71.3
EL10Ac7g18137 Beta vulgaris HOM05D005569 ORTHO05D007052 7.3e-46 188.0 118 78.0
Cpa.g.sc176.7 Carica papaya HOM05D005569 ORTHO05D007052 2.8e-45 186.0 118 80.5
SEGI_33936 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 2.8e-45 186.0 121 74.4
TWI75G0478 Tripterygium wilfordii HOM05D005569 ORTHO05D007052 2.8e-45 186.0 136 69.9
CiPaw.02G129100 Carya illinoinensis HOM05D005569 ORTHO05D007052 3.6e-45 185.7 119 80.7
AL2G39310 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 4.8e-45 185.3 134 70.1
QL05p088862 Quercus lobata HOM05D005569 ORTHO05D007052 4.8e-45 185.3 135 71.1
AT1G78895 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 1.1e-44 184.1 134 70.1
CARHR072480 Cardamine hirsuta HOM05D005569 ORTHO05D007052 1.1e-44 184.1 134 70.1
VMungo0331G1663 Vigna mungo HOM05D005569 ORTHO05D007052 1.4e-44 183.7 131 70.2
Potri.008G004200 Populus trichocarpa HOM05D005569 ORTHO05D007052 3.1e-44 182.6 116 80.2
SGA_v2.0_scaffold4G02105 Striga asiatica HOM05D005569 ORTHO05D007052 3.1e-44 182.6 117 78.6
MSTRG.9559 Avicennia marina HOM05D005569 ORTHO05D007052 4.0e-44 182.2 117 78.6
BcaB02g07184 Brassica carinata HOM05D005569 ORTHO05D007052 4.0e-44 182.2 134 69.4
Migut.D00888 Erythranthe guttata HOM05D005569 ORTHO05D007052 4.0e-44 182.2 117 79.5
THA.LOC104808103 Tarenaya hassleriana HOM05D005569 ORTHO05D007052 5.3e-44 181.8 126 73.8
MSTRG.4523 Avicennia marina HOM05D005569 ORTHO05D007052 6.9e-44 181.4 117 78.6
Carub.0002s2572 Capsella rubella HOM05D005569 ORTHO05D007052 6.9e-44 181.4 118 76.3
FAN05G2575 Fragaria x ananassa HOM05D005569 ORTHO05D007052 1.2e-43 180.6 158 63.9
Glyma.07G001900 Glycine max HOM05D005569 ORTHO05D007052 1.2e-43 180.6 119 75.6
Sp5g33910 Schrenkiella parvula HOM05D005569 ORTHO05D007052 2.6e-43 179.5 134 67.9
SalBow4G0561 Salvia bowleyana HOM05D005569 ORTHO05D007052 4.5e-43 178.7 118 75.4
Thhalv10019242m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 2.2e-42 176.4 118 73.7
PGR031G1139 Punica granatum HOM05D005569 ORTHO05D007052 2.2e-42 176.4 152 62.5
A07p27440 Brassica napus HOM05D005569 ORTHO05D007052 4.9e-42 175.3 132 71.2
BraA07t30385Z Brassica rapa HOM05D005569 ORTHO05D007052 4.9e-42 175.3 132 71.2
Actinidia31124 Actinidia chinensis HOM05D005569 ORTHO05D007052 1.1e-41 174.1 113 81.4
Aa31LG4G2110 Aethionema arabicum HOM05D005569 ORTHO05D007052 1.1e-41 174.1 126 72.2
BcaC08g45404 Brassica carinata HOM05D005569 ORTHO05D007052 1.1e-41 174.1 132 70.5
C06p30360 Brassica napus HOM05D005569 ORTHO05D007052 1.1e-41 174.1 132 70.5
Lalb_Chr01g0011651 Lupinus albus HOM05D005569 ORTHO05D007052 1.9e-41 173.3 148 62.8
Hund18590 Selenicereus undatus HOM05D005569 ORTHO05D007052 1.9e-41 173.3 137 63.5
Sp1g14960 Schrenkiella parvula HOM05D005569 ORTHO05D007052 3.2e-41 172.6 118 75.4
BcaC07g41383 Brassica carinata HOM05D005569 ORTHO05D007052 4.2e-41 172.2 118 75.4
BolC6t38199H Brassica oleracea HOM05D005569 ORTHO05D007052 4.2e-41 172.2 132 69.7
AL1G28990 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 5.5e-41 171.8 126 71.4
AT1G16825 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 7.1e-41 171.4 126 71.4
Carub.0001s1656 Capsella rubella HOM05D005569 ORTHO05D007052 7.1e-41 171.4 126 71.4
AUR62001332 Chenopodium quinoa HOM05D005569 ORTHO05D007052 7.1e-41 171.4 105 82.9
CARHR017290 Cardamine hirsuta HOM05D005569 ORTHO05D007052 1.2e-40 170.6 134 67.2
SEGI_27689 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 2.1e-40 169.9 121 67.8
A09p60680 Brassica napus HOM05D005569 ORTHO05D007052 2.7e-40 169.5 121 74.4
BraA09t41445Z Brassica rapa HOM05D005569 ORTHO05D007052 2.7e-40 169.5 121 74.4
MBI16_g18210_MAGBIO Magnolia biondii HOM05D005569 ORTHO05D007052 2.7e-40 169.5 97 84.5
Peaxi162Scf00084g00024 Petunia axillaris HOM05D005569 ORTHO05D007052 1.0e-39 167.5 148 68.2
BcaC07g41456 Brassica carinata HOM05D005569 ORTHO05D007052 1.8e-39 166.8 121 73.6
C08p44280 Brassica napus HOM05D005569 ORTHO05D007052 1.8e-39 166.8 121 73.6
BolC8t51973H Brassica oleracea HOM05D005569 ORTHO05D007052 1.8e-39 166.8 121 73.6
DCAR_028944 Daucus carota HOM05D005569 ORTHO05D007052 1.5e-38 163.7 102 82.4
CANSAT01G2461 Cannabis sativa HOM05D005569 ORTHO05D007052 1.9e-38 163.3 125 68.0
Phvul.010G164400 Phaseolus vulgaris HOM05D005569 ORTHO05D007052 3.3e-38 162.5 114 71.1
Zm00001eb414080 Zea mays HOM05D005569 ORTHO05D007052 4.3e-38 162.2 115 69.6
Haze_16187 Corylus avellana HOM05D005569 ORTHO05D007052 4.8e-37 158.7 107 73.8
Pp3c8_16360 Physcomitrium patens HOM05D005569 ORTHO05D007052 1.7e-34 150.2 118 61.9
SMO215G0002 Selaginella moellendorffii HOM05D005569 ORTHO05D007052 3.2e-33 146.0 118 60.2
Sabra08G0001800 Salix brachista HOM05D005569 ORTHO05D007052 1.2e-32 144.1 95 77.9
Thhalv10009539m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 6.0e-32 141.7 94 74.5
Mapoly0045s0143 Marchantia polymorpha HOM05D005569 ORTHO05D007052 7.9e-32 141.4 118 53.4
Os08g0225100 Oryza sativa ssp. japonica HOM05D005569 ORTHO05D007052 5.3e-28 128.6 90 72.2
Atru.chr1.2818 Acer truncatum HOM05D005569 ORTHO05D007052 1.9e-25 120.2 72 80.6
Cc04_g00060 Coffea canephora HOM05D005569 ORTHO05D007052 2.5e-25 119.8 75 78.7
ATR0626G016 Amborella trichopoda HOM05D005569 ORTHO05D007052 7.9e-24 114.8 98 63.3
Prupe.3G058300 Prunus persica HOM05D005569 ORTHO05D007052 5.1e-23 112.1 82 69.5
Pp3c24_12140 Physcomitrium patens HOM05D005569 ORTHO05D007052 3.7e-21 105.9 115 52.2
CBR_g40779 Chara braunii HOM05D005569 ORTHO05D007052 1.4e-20 104.0 118 47.5
Duzib192G1047 Durio zibethinus HOM05D005569 ORTHO05D007052 1.4e-20 104.0 71 71.8
CBR_g41646 Chara braunii HOM05D000785 ORTHO05D000231 1.0e-18 97.8 122 43.4
CBR_g49429 Chara braunii HOM05D005569 ORTHO05D007052 5.0e-18 95.5 118 42.4
Duzib235G0081 Durio zibethinus HOM05D005569 ORTHO05D007052 7.9e-16 88.2 90 57.8
unitig_899.g14763 Utricularia gibba HOM05D000070 ORTHO05D003301 2.3e-15 86.7 54 74.1
HPP92_023858 Vanilla planifolia HOM05D005569 ORTHO05D007052 5.7e-14 82.0 50 74.0
BcaC07g41384 Brassica carinata HOM05D005569 ORTHO05D007052 3.4e-11 72.8 83 51.8
SEGI_34083 Sequoiadendron giganteum HOM05D000074 ORTHO05D000220 2.2e-10 70.1 47 72.3
C08p44240 Brassica napus HOM05D005569 ORTHO05D007052 9.4e-09 64.7 54 64.8
BolC8t51970H Brassica oleracea HOM05D005569 ORTHO05D007052 1.6e-08 63.9 48 66.7


User provided reference genes

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