Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003757g0010 Nicotiana tabacum HOM05D001117 ORTHO05D000930 1.4e-54 216.1 109 100.0
Nitab4.5_0002354g0010 Nicotiana tabacum HOM05D001117 ORTHO05D000930 2.4e-43 178.7 104 87.5
CAN.G308.10 Capsicum annuum HOM05D001117 ORTHO05D000930 1.9e-32 142.5 108 69.4
PGSC0003DMG400026515 Solanum tuberosum HOM05D001117 ORTHO05D000930 1.0e-30 136.7 109 67.9
Sopen06g022740 Solanum pennellii HOM05D001117 ORTHO05D000930 2.8e-28 128.6 107 64.5
Solyc06g063280.1 Solanum lycopersicum HOM05D001117 ORTHO05D000930 1.2e-26 123.2 107 64.5
Prupe.3G020100 Prunus persica HOM05D001117 ORTHO05D000930 9.8e-21 103.6 105 51.4
FAN02G0164 Fragaria x ananassa HOM05D001117 ORTHO05D000930 3.7e-20 101.7 105 50.5
FAN05G3317 Fragaria x ananassa HOM05D001117 ORTHO05D000930 6.3e-20 100.9 105 51.4
FAN09G1618 Fragaria x ananassa HOM05D001117 ORTHO05D000930 1.1e-19 100.1 105 51.4
Dinv20347 Davidia involucrata HOM05D001117 ORTHO05D000930 3.1e-19 98.6 114 50.9
Oeu031650.1 Olea europaea HOM05D001117 ORTHO05D000930 3.1e-19 98.6 105 53.3
FvH4_6g37140 Fragaria vesca HOM05D001117 ORTHO05D000930 1.2e-18 96.7 105 48.6
RcHm_v2.0_Chr2g0149701 Rosa chinensis HOM05D001117 ORTHO05D000930 2.0e-18 95.9 105 50.5
CANSAT01G2657 Cannabis sativa HOM05D001117 ORTHO05D000930 2.7e-18 95.5 112 47.3
Ciclev10026364m.g Citrus clementina HOM05D001117 ORTHO05D000930 4.5e-18 94.7 111 46.8
Potri.010G251800 Populus trichocarpa HOM05D001117 ORTHO05D000930 7.8e-18 94.0 109 45.0
Potri.008G007000 Populus trichocarpa HOM05D001117 ORTHO05D000930 1.0e-17 93.6 107 43.9
Cfa002141 Carpinus fangiana HOM05D001117 ORTHO05D000930 1.7e-17 92.8 109 49.5
COL.COLO4_31183 Corchorus olitorius HOM05D001117 ORTHO05D000930 3.8e-17 91.7 108 49.1
Sabra10G0195900 Salix brachista HOM05D001117 ORTHO05D000930 3.8e-17 91.7 109 43.1
Nn8g40727 Nelumbo nucifera HOM05D001117 ORTHO05D000930 8.6e-17 90.5 107 48.6
Sabra08G0003800 Salix brachista HOM05D001117 ORTHO05D000930 8.6e-17 90.5 107 41.1
Thecc.06G060100 Theobroma cacao HOM05D001117 ORTHO05D000930 1.1e-16 90.1 107 47.7
Oeu001812.1 Olea europaea HOM05D001117 ORTHO05D000930 1.9e-16 89.4 105 49.5
QL05p083841 Quercus lobata HOM05D001117 ORTHO05D000930 5.6e-16 87.8 111 45.9
Duzib192G0840 Durio zibethinus HOM05D001117 ORTHO05D000930 9.5e-16 87.0 107 45.8
Haze_16285 Corylus avellana HOM05D001117 ORTHO05D000930 1.6e-15 86.3 105 45.7
Haze_16287 Corylus avellana HOM05D001117 ORTHO05D000930 1.6e-15 86.3 105 45.7
Duzib160G0071 Durio zibethinus HOM05D001117 ORTHO05D000930 2.1e-15 85.9 103 47.6
MSTRG.10885 Avicennia marina HOM05D001117 ORTHO05D000930 3.6e-15 85.1 107 47.7
SalBow6G1297 Salvia bowleyana HOM05D001117 ORTHO05D000930 4.7e-15 84.7 105 48.6
TWI12G0590 Tripterygium wilfordii HOM05D001117 ORTHO05D000930 1.0e-14 83.6 106 44.3
Oeu044523.1 Olea europaea HOM05D001117 ORTHO05D000930 1.4e-14 83.2 108 47.2
Eucgr.F04023 Eucalyptus grandis HOM05D001117 ORTHO05D000930 2.3e-14 82.4 107 44.9
CiPaw.01G090100 Carya illinoinensis HOM05D001117 ORTHO05D000930 3.0e-14 82.0 109 43.1
TAR625G0819 Trochodendron aralioides HOM05D001117 ORTHO05D000930 4.0e-14 81.6 107 43.9
SGA_v2.0_scaffold71G24000 Striga asiatica HOM05D001117 ORTHO05D000930 7.5e-13 77.4 106 43.4
TAR626G0811 Trochodendron aralioides HOM05D001117 ORTHO05D000930 7.5e-13 77.4 106 43.4
VMungo0647G0217 Vigna mungo HOM05D001117 ORTHO05D000930 1.7e-12 76.3 107 42.1
AUR62025650 Chenopodium quinoa HOM05D001117 ORTHO05D000930 2.2e-12 75.9 110 43.6
Sc12g0011110 Simmondsia chinensis HOM05D001117 ORTHO05D000930 4.9e-12 74.7 109 45.0
AUR62001354 Chenopodium quinoa HOM05D001117 ORTHO05D000930 6.4e-12 74.3 110 41.8
Hma1.2p1_0517F.1_g170690 Hydrangea macrophylla HOM05D001117 ORTHO05D000930 8.3e-12 73.9 113 42.5
Migut.I01186 Erythranthe guttata HOM05D001117 ORTHO05D000930 1.9e-11 72.8 105 44.8
Nitab4.5_0001691g0210 Nicotiana tabacum HOM05D001117 ORTHO05D000930 1.9e-11 72.8 79 54.4
Glyma.07G020400 Glycine max HOM05D001117 ORTHO05D000930 2.4e-11 72.4 105 41.0
Glyma.08G221600 Glycine max HOM05D001117 ORTHO05D000930 3.2e-11 72.0 104 40.4
Phvul.008G254400 Phaseolus vulgaris HOM05D001117 ORTHO05D000930 4.1e-11 71.6 88 44.3
PSO170G5160 Papaver somniferum HOM05D001117 ORTHO05D000930 1.2e-10 70.1 105 34.3
Ah.08g217770 Amaranthus hybridus HOM05D001117 ORTHO05D000930 2.0e-10 69.3 107 40.2
EL10Ac7g18174 Beta vulgaris HOM05D001117 ORTHO05D000930 2.7e-10 68.9 113 38.9
PSO063G7143 Papaver somniferum HOM05D001117 ORTHO05D000930 2.7e-10 68.9 105 34.3
Atru.chr1.2719 Acer truncatum HOM05D001117 ORTHO05D000930 3.5e-10 68.6 95 44.2
PGR102G1110 Punica granatum HOM05D001117 ORTHO05D000930 7.8e-10 67.4 108 42.6
Ah.15g094370 Amaranthus hybridus HOM05D001117 ORTHO05D000930 1.7e-09 66.2 111 38.7
Aqoxy7G02853 Aquilegia oxysepala HOM05D001117 ORTHO05D000930 1.7e-09 66.2 114 37.7
Lj3g0018576 Lotus japonicus HOM05D001117 ORTHO05D000930 1.7e-09 66.2 105 41.9
Medtr4g008050 Medicago truncatula HOM05D001117 ORTHO05D000930 1.7e-09 66.2 84 42.9
Ca_20503_v3 Cicer arietinum L. HOM05D001117 ORTHO05D000930 6.6e-09 64.3 83 44.6
Lsat_1_v5_gn_1_39541 Lactuca sativa HOM05D001117 ORTHO05D000930 8.6e-09 63.9 114 40.4
MBI16_g05841_MAGBIO Magnolia biondii HOM05D001117 ORTHO05D000930 1.1e-08 63.5 105 41.9
MBI13_g34050_MAGBIO Magnolia biondii HOM05D001117 ORTHO05D000930 1.5e-08 63.2 105 41.9
THA.LOC104816867 Tarenaya hassleriana HOM05D001117 ORTHO05D000930 5.6e-08 61.2 106 33.0
Aa31LG8G7850 Aethionema arabicum HOM05D001117 ORTHO05D000930 9.5e-08 60.5 106 39.6
TPR.G15694 Trifolium pratense HOM05D001117 ORTHO05D000930 9.5e-08 60.5 82 42.7
Psat7g260760 Pisum sativum HOM05D001117 ORTHO05D000930 1.6e-07 59.7 69 47.8
Oeu008402.1 Olea europaea HOM05D001117 ORTHO05D000930 2.1e-07 59.3 81 44.4
BraA05t21646Z Brassica rapa HOM05D001117 ORTHO05D000930 2.8e-07 58.9 104 36.5
BcaC05g28254 Brassica carinata HOM05D001117 ORTHO05D000930 3.6e-07 58.5 104 36.5
C05p42670 Brassica napus HOM05D001117 ORTHO05D000930 3.6e-07 58.5 104 36.5
BolC5t32986H Brassica oleracea HOM05D001117 ORTHO05D000930 6.2e-07 57.8 104 36.5
A05p27570 Brassica napus HOM05D001117 ORTHO05D000930 1.4e-06 56.6 104 35.6
BcaB04g19145 Brassica carinata HOM05D001117 ORTHO05D000930 3.1e-06 55.5 106 33.0
BraA03t13360Z Brassica rapa HOM05D001117 ORTHO05D000930 5.2e-06 54.7 106 32.1
BcaB06g26185 Brassica carinata HOM05D001117 ORTHO05D000930 6.8e-06 54.3 106 34.0
A03p42060 Brassica napus HOM05D001117 ORTHO05D000930 8.9e-06 53.9 106 32.1


User provided reference genes

Program Settings