Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003750g0060 Nicotiana tabacum HOM05D005053 ORTHO05D006206 5.1e-107 391.0 182 100.0
Peaxi162Scf00993g00120 Petunia axillaris HOM05D005053 ORTHO05D006206 9.5e-45 184.1 165 58.2
Nitab4.5_0009901g0010 Nicotiana tabacum HOM05D005053 ORTHO05D006206 7.8e-39 164.5 189 47.1
Nitab4.5_0002157g0070 Nicotiana tabacum HOM05D005053 ORTHO05D006206 1.7e-38 163.3 141 62.4
Migut.H00475 Erythranthe guttata HOM05D005053 ORTHO05D006206 2.6e-34 149.4 138 55.8
Dinv39902 Davidia involucrata HOM05D005053 ORTHO05D006206 2.2e-33 146.4 142 52.8
Oeu004887.1 Olea europaea HOM05D005053 ORTHO05D006206 2.9e-33 146.0 138 55.1
Cc07_g05640 Coffea canephora HOM05D005053 ORTHO05D006206 3.8e-33 145.6 141 52.5
Actinidia12070 Actinidia chinensis HOM05D005053 ORTHO05D006206 1.4e-32 143.7 141 52.5
Nitab4.5_0000806g0140 Nicotiana tabacum HOM05D005053 ORTHO05D006206 1.9e-32 143.3 139 52.5
Dinv29944 Davidia involucrata HOM05D005053 ORTHO05D006206 4.1e-32 142.1 144 52.1
unitig_736.g22369 Utricularia gibba HOM05D005053 ORTHO05D006206 4.1e-32 142.1 140 52.9
Peaxi162Scf00049g01010 Petunia axillaris HOM05D005053 ORTHO05D006206 7.1e-32 141.4 141 50.4
CSS0024932 Camellia sinensis var. sinensis HOM05D005053 ORTHO05D006206 9.2e-32 141.0 141 50.4
HanXRQChr14g0448331 Helianthus annuus HOM05D005053 ORTHO05D006206 9.2e-32 141.0 141 51.8
Lj7A44T18 Lonicera japonica HOM05D005053 ORTHO05D006206 1.2e-31 140.6 142 52.8
Hma1.2p1_0687F.1_g203520 Hydrangea macrophylla HOM05D005053 ORTHO05D006206 2.1e-31 139.8 140 50.7
HanXRQChr07g0199901 Helianthus annuus HOM05D005053 ORTHO05D006206 2.7e-31 139.4 141 50.4
Lsat_1_v5_gn_2_86920 Lactuca sativa HOM05D005053 ORTHO05D006206 2.7e-31 139.4 141 50.4
DCAR_025697 Daucus carota HOM05D005053 ORTHO05D006206 3.5e-31 139.0 142 50.0
CAN.G470.7 Capsicum annuum HOM05D005053 ORTHO05D006206 1.3e-30 137.1 139 50.4
Solyc02g065180.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 1.3e-30 137.1 139 51.8
Sopen02g015310 Solanum pennellii HOM05D005053 ORTHO05D006206 1.3e-30 137.1 139 51.8
Sopen02g035010 Solanum pennellii HOM05D005053 ORTHO05D006206 2.3e-30 136.3 140 49.3
PGSC0003DMG400010070 Solanum tuberosum HOM05D005053 ORTHO05D006206 6.6e-30 134.8 140 49.3
GSVIVG01005060001 Vitis vinifera HOM05D005053 ORTHO05D006206 6.6e-30 134.8 140 50.7
Solyc02g090330.3 Solanum lycopersicum HOM05D005053 ORTHO05D006206 8.6e-30 134.4 140 48.6
TAR628G0491 Trochodendron aralioides HOM05D005053 ORTHO05D006206 3.3e-29 132.5 142 50.7
Ca_22228_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 5.6e-29 131.7 142 49.3
ECA238G1636 Erigeron canadensis HOM05D005053 ORTHO05D006206 5.6e-29 131.7 141 48.9
arahy.Tifrunner.gnm1.ann1.IMYE37 Arachis hypogaea HOM05D005053 ORTHO05D006206 9.6e-29 131.0 140 49.3
arahy.Tifrunner.gnm1.ann1.VE46QQ Arachis hypogaea HOM05D005053 ORTHO05D006206 9.6e-29 131.0 140 49.3
vmacro17912 Vaccinium macrocarpon HOM05D005053 ORTHO05D006206 9.6e-29 131.0 140 46.4
Lalb_Chr09g0333681 Lupinus albus HOM05D005053 ORTHO05D006206 1.2e-28 130.6 140 50.0
Actinidia36514 Actinidia chinensis HOM05D005053 ORTHO05D006206 1.6e-28 130.2 140 50.0
Aqoxy6G00906 Aquilegia oxysepala HOM05D005053 ORTHO05D006206 2.1e-28 129.8 140 49.3
AUR62003832 Chenopodium quinoa HOM05D005053 ORTHO05D006206 2.1e-28 129.8 140 49.3
Ca_22210_v3 Cicer arietinum L. HOM05D005053 ORTHO05D006206 2.1e-28 129.8 140 49.3
VMungo0251G0766 Vigna mungo HOM05D005053 ORTHO05D006206 2.1e-28 129.8 139 48.9
Glyma.17G180900 Glycine max HOM05D005053 ORTHO05D006206 2.8e-28 129.4 140 48.6
Phvul.003G248000 Phaseolus vulgaris HOM05D005053 ORTHO05D006206 2.8e-28 129.4 140 48.6
MSTRG.15402 Avicennia marina HOM05D005053 ORTHO05D006206 3.6e-28 129.0 150 46.7
Medtr8g079240 Medicago truncatula HOM05D005053 ORTHO05D006206 3.6e-28 129.0 140 49.3
SGA_v2.0_scaffold204G41608 Striga asiatica HOM05D005053 ORTHO05D006206 3.6e-28 129.0 141 46.8
SGA_v2.0_scaffold27G11440 Striga asiatica HOM05D005053 ORTHO05D006206 3.6e-28 129.0 141 46.8
Lj4g0026236 Lotus japonicus HOM05D005053 ORTHO05D006206 1.4e-27 127.1 140 47.9
RcHm_v2.0_Chr2g0104011 Rosa chinensis HOM05D005053 ORTHO05D006206 1.4e-27 127.1 141 46.8
PSO541G4895 Papaver somniferum HOM05D005053 ORTHO05D006206 1.8e-27 126.7 139 46.8
PSO675G4006 Papaver somniferum HOM05D005053 ORTHO05D006206 1.8e-27 126.7 139 46.8
EL10Ac6g15144 Beta vulgaris HOM05D005053 ORTHO05D006206 4.0e-27 125.6 138 48.6
AUR62001971 Chenopodium quinoa HOM05D005053 ORTHO05D006206 4.0e-27 125.6 138 48.6
PGR102G2816 Punica granatum HOM05D005053 ORTHO05D006206 4.0e-27 125.6 140 47.9
Sed0021889 Sechium edule HOM05D005053 ORTHO05D006206 4.0e-27 125.6 141 48.2
Nn6g32115 Nelumbo nucifera HOM05D005053 ORTHO05D006206 1.2e-26 124.0 140 47.1
TAR376G0500 Trochodendron aralioides HOM05D005053 ORTHO05D006206 1.5e-26 123.6 140 47.9
QL06p043337 Quercus lobata HOM05D005053 ORTHO05D006206 3.4e-26 122.5 138 48.6
SEGI_13826 Sequoiadendron giganteum HOM05D005053 ORTHO05D006206 3.4e-26 122.5 139 45.3
Sc03g0001310 Simmondsia chinensis HOM05D005053 ORTHO05D006206 3.4e-26 122.5 139 47.5
ClCG01G016600 Citrullus lanatus HOM05D005053 ORTHO05D006206 4.4e-26 122.1 142 46.5
Hund13583 Selenicereus undatus HOM05D005053 ORTHO05D006206 4.4e-26 122.1 139 46.8
MELO3C007534.2 Cucumis melo HOM05D005053 ORTHO05D006206 5.8e-26 121.7 142 45.8
CsaV3_6G042980 Cucumis sativus L. HOM05D005053 ORTHO05D006206 5.8e-26 121.7 142 45.8
CiPaw.01G025900 Carya illinoinensis HOM05D005053 ORTHO05D006206 9.9e-26 120.9 141 46.1
FvH4_1g14960 Fragaria vesca HOM05D005053 ORTHO05D006206 1.3e-25 120.6 142 46.5
MD02G1163200 Malus domestica HOM05D005053 ORTHO05D006206 1.3e-25 120.6 141 46.1
Ah.02g124120 Amaranthus hybridus HOM05D005053 ORTHO05D006206 1.7e-25 120.2 140 45.0
Ciclev10026393m.g Citrus clementina HOM05D005053 ORTHO05D006206 1.7e-25 120.2 141 48.2
MD15G1276200 Malus domestica HOM05D005053 ORTHO05D006206 1.7e-25 120.2 140 47.1
Haze_15460 Corylus avellana HOM05D005053 ORTHO05D006206 2.9e-25 119.4 142 47.2
FAN23G1215 Fragaria x ananassa HOM05D005053 ORTHO05D006206 2.9e-25 119.4 142 45.8
FAN26G1713 Fragaria x ananassa HOM05D005053 ORTHO05D006206 2.9e-25 119.4 142 45.8
Atru.chr3.440 Acer truncatum HOM05D005053 ORTHO05D006206 4.9e-25 118.6 141 48.2
FAN19G0163 Fragaria x ananassa HOM05D005053 ORTHO05D006206 1.4e-24 117.1 142 45.1
Manes.13G129200 Manihot esculenta HOM05D005053 ORTHO05D006206 1.4e-24 117.1 141 46.8
Cpa.g.sc6.408 Carica papaya HOM05D005053 ORTHO05D006206 5.4e-24 115.2 140 44.3
Gohir.A12G069100 Gossypium hirsutum HOM05D005053 ORTHO05D006206 5.4e-24 115.2 143 46.9
Gohir.D12G090200 Gossypium hirsutum HOM05D005053 ORTHO05D006206 5.4e-24 115.2 143 46.9
AL8G44450 Arabidopsis lyrata HOM05D005053 ORTHO05D006206 9.3e-24 114.4 140 45.7
Carub.0008s2757 Capsella rubella HOM05D005053 ORTHO05D006206 1.2e-23 114.0 140 45.7
Thecc.01G049700 Theobroma cacao HOM05D005053 ORTHO05D006206 1.2e-23 114.0 142 47.2
COL.COLO4_11341 Corchorus olitorius HOM05D005053 ORTHO05D006206 1.6e-23 113.6 141 46.1
FAN28G1734 Fragaria x ananassa HOM05D005053 ORTHO05D006206 1.6e-23 113.6 143 44.8
Gorai.008G072800 Gossypium raimondii HOM05D005053 ORTHO05D006206 2.1e-23 113.2 141 46.8
MBI16_g19902_MAGBIO Magnolia biondii HOM05D005053 ORTHO05D006206 2.1e-23 113.2 130 48.5
CARHR280750 Cardamine hirsuta HOM05D005053 ORTHO05D006206 2.7e-23 112.8 140 45.0
Duzib147G0596 Durio zibethinus HOM05D005053 ORTHO05D006206 2.7e-23 112.8 143 46.9
Eucgr.H01988 Eucalyptus grandis HOM05D005053 ORTHO05D006206 2.7e-23 112.8 140 42.1
Thhalv10005270m.g Eutrema salsugineum HOM05D005053 ORTHO05D006206 2.7e-23 112.8 140 45.0
Psat4g088960 Pisum sativum HOM05D005053 ORTHO05D006206 2.7e-23 112.8 130 46.9
THA.LOC104819229 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 6.0e-23 111.7 139 43.2
Cfa003962 Carpinus fangiana HOM05D005053 ORTHO05D006206 1.0e-22 110.9 141 44.7
ATR0225G009 Amborella trichopoda HOM05D005053 ORTHO05D006206 1.3e-22 110.5 140 42.9
HPP92_024294 Vanilla planifolia HOM05D005053 ORTHO05D006206 2.3e-22 109.8 137 43.8
HPP92_024303 Vanilla planifolia HOM05D005053 ORTHO05D006206 2.3e-22 109.8 137 43.8
AT5G66930 Arabidopsis thaliana HOM05D005053 ORTHO05D006206 3.9e-22 109.0 139 44.6
Aa31LG1G15480 Aethionema arabicum HOM05D005053 ORTHO05D006206 5.1e-22 108.6 140 44.3
Rhsim08G0104900 Rhododendron simsii HOM05D005053 ORTHO05D006206 6.6e-22 108.2 197 34.5
RhsimUnG0070600 Rhododendron simsii HOM05D005053 ORTHO05D006206 6.6e-22 108.2 197 34.5
BcaB04g20086 Brassica carinata HOM05D005053 ORTHO05D006206 8.7e-22 107.8 139 43.2
Sp2g29730 Schrenkiella parvula HOM05D005053 ORTHO05D006206 8.7e-22 107.8 140 44.3
Prupe.7G140800 Prunus persica HOM05D005053 ORTHO05D006206 1.1e-21 107.5 136 44.9
THA.LOC104821262 Tarenaya hassleriana HOM05D005053 ORTHO05D006206 2.5e-21 106.3 141 44.0
Sabra07G0034100 Salix brachista HOM05D005053 ORTHO05D006206 9.6e-21 104.4 141 43.3
TWI53G1273 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 1.3e-20 104.0 141 43.3
Duzib264G0045 Durio zibethinus HOM05D005053 ORTHO05D006206 2.1e-20 103.2 143 42.0
TWI09G0689 Tripterygium wilfordii HOM05D005053 ORTHO05D006206 2.1e-20 103.2 144 42.4
BcaC04g23174 Brassica carinata HOM05D005053 ORTHO05D006206 2.8e-20 102.8 140 41.4
C09p11390 Brassica napus HOM05D005053 ORTHO05D006206 2.8e-20 102.8 140 41.4
BolC9t54027H Brassica oleracea HOM05D005053 ORTHO05D006206 2.8e-20 102.8 141 41.8
Duzib264G0685 Durio zibethinus HOM05D005053 ORTHO05D006206 3.6e-20 102.4 143 42.0
Mapoly0011s0084 Marchantia polymorpha HOM05D005053 ORTHO05D006206 3.6e-20 102.4 137 41.6
Nn5g29376 Nelumbo nucifera HOM05D005053 ORTHO05D006206 6.2e-20 101.7 140 42.1
Potri.007G037800 Populus trichocarpa HOM05D005053 ORTHO05D006206 6.2e-20 101.7 140 42.9
A09p09640 Brassica napus HOM05D005053 ORTHO05D006206 1.1e-19 100.9 139 41.7
BraA09t36613Z Brassica rapa HOM05D005053 ORTHO05D006206 1.1e-19 100.9 139 41.7
SGA_v2.0_scaffold15G07238 Striga asiatica HOM05D005053 ORTHO05D006206 2.4e-19 99.8 67 74.6
BcaC06g34767 Brassica carinata HOM05D005053 ORTHO05D006206 3.1e-19 99.4 137 41.6
C07p24820 Brassica napus HOM05D005053 ORTHO05D006206 3.1e-19 99.4 137 41.6
BolC7t43007H Brassica oleracea HOM05D005053 ORTHO05D006206 3.1e-19 99.4 137 41.6
CDE02G0556 Ceratophyllum demersum HOM05D005053 ORTHO05D006206 6.9e-19 98.2 126 44.4
AagrBONN_evm.TU.Sc2ySwM_344.1821 Anthoceros agrestis HOM05D005053 ORTHO05D006206 9.0e-19 97.8 131 39.7
BcaB02g09970 Brassica carinata HOM05D005053 ORTHO05D006206 9.0e-19 97.8 137 42.3
BraA07t29424Z Brassica rapa HOM05D005053 ORTHO05D006206 1.5e-18 97.1 137 40.9
SMO271G0126 Selaginella moellendorffii HOM05D005053 ORTHO05D006206 2.0e-18 96.7 139 38.8
A07p16970 Brassica napus HOM05D005053 ORTHO05D006206 3.4e-18 95.9 137 40.1
Os12g0446700 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 4.9e-17 92.0 140 37.9
Os12g0428200 Oryza sativa ssp. japonica HOM05D005053 ORTHO05D006206 8.4e-17 91.3 126 38.1
Psat4g089040 Pisum sativum HOM05D005053 ORTHO05D006206 8.4e-17 91.3 132 38.6
Zm00001eb184240 Zea mays HOM05D005053 ORTHO05D006206 1.9e-16 90.1 126 38.1
Pp3c11_5110 Physcomitrium patens HOM05D005053 ORTHO05D006206 9.3e-16 87.8 143 38.5
BcaC03g18393 Brassica carinata HOM05D005053 ORTHO05D006206 6.7e-14 81.6 143 35.0
C02p64670 Brassica napus HOM05D005053 ORTHO05D006206 6.7e-14 81.6 143 35.0
BolC2t12528H Brassica oleracea HOM05D005053 ORTHO05D006206 6.7e-14 81.6 143 35.0
AagrBONN_evm.TU.Sc2ySwM_344.1822 Anthoceros agrestis HOM05D005053 ORTHO05D006206 1.1e-13 80.9 134 33.6
Ah.03g144090 Amaranthus hybridus HOM05D005053 ORTHO05D006206 5.6e-13 78.6 106 40.6
CBR_g23008 Chara braunii HOM05D005053 ORTHO05D006206 1.4e-11 73.9 137 33.6
CAN.G836.41 Capsicum annuum HOM05D005053 ORTHO05D024763 1.8e-11 73.6 113 46.0
AUR62028910 Chenopodium quinoa HOM05D005053 ORTHO05D006206 2.4e-11 73.2 100 42.0
CiPaw.02G011700 Carya illinoinensis HOM05D005053 ORTHO05D006206 9.0e-11 71.2 110 38.2
TPR.G40637 Trifolium pratense HOM05D005053 ORTHO05D006206 5.8e-10 68.6 41 78.0
TPR.G672 Trifolium pratense HOM05D005053 ORTHO05D006206 8.4e-09 64.7 98 37.8
Cre07.g334700 Chlamydomonas reinhardtii HOM05D005053 ORTHO05D006206 5.5e-08 62.0 62 48.4
MCO07G250 Micromonas commoda HOM05D005053 ORTHO05D006206 5.5e-08 62.0 127 28.3
AagrBONN_evm.TU.Sc2ySwM_369.468 Anthoceros agrestis HOM05D000050 ORTHO05D000771 7.9e-07 58.2 119 32.8


User provided reference genes

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