Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 3.8e-97 358.2 186 100.0
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 2.0e-90 335.9 184 95.7
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 3.0e-78 295.4 186 83.3
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 1.6e-76 289.7 186 81.7
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 1.1e-75 287.0 186 80.6
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 2.7e-71 272.3 187 77.5
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 1.3e-60 236.9 184 64.7
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.8e-59 233.0 184 67.4
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 3.1e-59 232.3 186 64.5
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 6.9e-59 231.1 185 64.9
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 1.5e-58 229.9 185 64.9
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 1.5e-58 229.9 193 63.7
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 2.0e-58 229.6 187 65.2
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 1.7e-57 226.5 186 67.2
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 2.9e-57 225.7 188 61.7
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 1.4e-56 223.4 190 61.1
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 7.2e-56 221.1 185 63.2
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 1.2e-55 220.3 184 60.9
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 1.6e-55 219.9 193 61.7
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 3.9e-54 215.3 184 59.2
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 7.4e-53 211.1 189 59.8
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 9.7e-53 210.7 182 62.1
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 1.3e-52 210.3 189 59.8
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 1.7e-52 209.9 187 58.8
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 4.8e-52 208.4 227 54.6
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 8.2e-52 207.6 188 59.6
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 8.2e-52 207.6 191 59.7
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 1.1e-51 207.2 184 62.5
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 1.4e-51 206.8 195 56.9
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.8e-51 206.5 188 59.6
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 3.1e-51 205.7 179 61.5
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 1.5e-50 203.4 187 58.3
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.5e-50 203.4 185 61.6
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 1.5e-50 203.4 185 61.6
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 2.6e-50 202.6 191 56.5
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 2.6e-50 202.6 197 58.9
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 3.5e-50 202.2 191 58.6
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 4.5e-50 201.8 185 62.7
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 4.5e-50 201.8 191 58.6
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 4.5e-50 201.8 186 59.1
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 1.0e-49 200.7 190 59.5
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 1.0e-49 200.7 191 58.1
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 1.3e-49 200.3 186 58.6
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.2e-49 199.5 192 56.2
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 2.2e-49 199.5 191 58.1
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 2.2e-49 199.5 191 57.1
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 2.9e-49 199.1 189 55.6
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 3.8e-49 198.7 192 55.7
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 3.8e-49 198.7 190 56.8
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 6.5e-49 198.0 193 55.4
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 8.5e-49 197.6 188 58.0
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 1.1e-48 197.2 191 57.6
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 1.1e-48 197.2 192 57.3
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 1.4e-48 196.8 192 57.3
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.5e-48 196.1 193 56.0
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 4.2e-48 195.3 188 55.3
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 4.2e-48 195.3 132 68.2
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 5.5e-48 194.9 183 58.5
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 7.2e-48 194.5 115 86.1
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 7.2e-48 194.5 186 57.5
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 7.2e-48 194.5 186 57.5
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 1.2e-47 193.7 188 55.3
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.2e-47 193.7 186 57.5
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 1.2e-47 193.7 189 54.5
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 2.7e-47 192.6 189 55.0
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 3.6e-47 192.2 189 56.1
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 3.6e-47 192.2 186 58.1
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.6e-47 192.2 186 57.0
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 6.1e-47 191.4 190 54.7
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 8.8e-46 187.6 189 56.6
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 1.5e-45 186.8 187 55.1
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 2.0e-45 186.4 188 55.3
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 2.6e-45 186.0 189 51.9
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 4.4e-45 185.3 188 55.3
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 5.7e-45 184.9 187 55.1
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 1.3e-44 183.7 191 53.9
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 1.3e-44 183.7 187 56.1
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 2.2e-44 183.0 188 53.2
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 2.2e-44 183.0 186 53.8
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 2.8e-44 182.6 192 53.1
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 3.7e-44 182.2 190 54.2
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 1.1e-43 180.6 188 53.2
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 1.1e-43 180.6 188 53.2
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 1.4e-43 180.3 190 54.2
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 1.4e-43 180.3 131 66.4
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 3.1e-43 179.1 183 54.1
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 5.3e-43 178.3 164 56.7
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 9.1e-43 177.6 189 53.4
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 2.6e-42 176.0 185 54.1
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 2.6e-42 176.0 185 54.1
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 2.6e-42 176.0 185 54.1
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 1.0e-41 174.1 192 51.6
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 1.0e-41 174.1 188 52.1
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 1.7e-41 173.3 188 53.7
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 4.7e-39 165.2 112 69.6
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 8.0e-39 164.5 187 44.4
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 1.8e-38 163.3 119 65.5
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.3e-38 162.9 133 57.1
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 5.2e-38 161.8 192 51.0
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.2e-37 160.6 108 70.4
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 2.6e-37 159.5 170 55.3
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 4.4e-37 158.7 169 55.0
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 3.1e-35 152.5 192 46.9
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.0e-34 149.8 146 52.1
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 4.2e-32 142.1 123 58.5
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 1.4e-30 137.1 185 44.3
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 2.3e-30 136.3 132 52.3
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 8.8e-30 134.4 184 45.7
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 8.8e-30 134.4 187 42.8
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 1.4e-27 127.1 77 75.3
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 5.4e-27 125.2 92 63.0
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 7.0e-27 124.8 174 43.7
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.0e-25 120.9 97 54.6
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.3e-25 119.8 92 58.7
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 2.8e-23 112.8 111 55.0
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 1.8e-22 110.2 129 54.3
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.6e-18 97.1 66 65.2
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 6.6e-17 91.7 177 32.8
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 4.7e-15 85.5 153 37.3
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 3.4e-13 79.3 99 51.5
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 1.3e-12 77.4 127 32.3
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 4.9e-12 75.5 123 33.3
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 1.1e-11 74.3 101 50.5
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.2e-07 60.8 92 46.7
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 5.2e-06 55.5 39 66.7


User provided reference genes

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