Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003733g0050 Nicotiana tabacum HOM05D004704 ORTHO05D005384 7.4e-86 320.5 158 100.0
Peaxi162Scf00200g00121 Petunia axillaris HOM05D004704 ORTHO05D005384 4.6e-11 72.0 45 73.3
Solyc03g006230.1 Solanum lycopersicum HOM05D004704 ORTHO05D005384 6.0e-11 71.6 43 74.4
PGSC0003DMG400018011 Solanum tuberosum HOM05D004704 ORTHO05D005384 6.0e-11 71.6 43 74.4
PGSC0003DMG400004386 Solanum tuberosum HOM05D004704 ORTHO05D005384 7.8e-11 71.2 43 74.4
Nitab4.5_0001375g0020 Nicotiana tabacum HOM05D004704 ORTHO05D005384 1.3e-10 70.5 206 32.0
Dinv04632 Davidia involucrata HOM05D004704 ORTHO05D005384 1.1e-09 67.4 43 72.1
CAN.G2115.3 Capsicum annuum HOM05D004704 ORTHO05D005384 3.3e-09 65.9 206 30.6
MBI06_g18007_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 1.6e-08 63.5 42 64.3
Nitab4.5_0002076g0080 Nicotiana tabacum HOM05D004704 ORTHO05D005384 4.7e-08 62.0 43 67.4
GSVIVG01021187001 Vitis vinifera HOM05D004704 ORTHO05D005384 8.1e-08 61.2 42 71.4
Lj1P1195T10 Lonicera japonica HOM05D004704 ORTHO05D005384 1.4e-07 60.5 42 71.4
HanXRQChr04g0115831 Helianthus annuus HOM05D004704 ORTHO05D005384 1.8e-07 60.1 42 69.0
CSS0042475 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 2.3e-07 59.7 42 66.7
MBI06_g18005_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 2.3e-07 59.7 42 69.0
Oeu041796.1 Olea europaea HOM05D004704 ORTHO05D005384 3.1e-07 59.3 42 61.9
Oeu041801.1 Olea europaea HOM05D004704 ORTHO05D005384 3.1e-07 59.3 42 61.9
Phvul.005G096400 Phaseolus vulgaris HOM05D004704 ORTHO05D005384 3.1e-07 59.3 44 61.4
Rhsim13G0186500 Rhododendron simsii HOM05D004704 ORTHO05D005384 3.1e-07 59.3 160 30.0
Sabra11G0046000 Salix brachista HOM05D004704 ORTHO05D005384 3.1e-07 59.3 42 69.0
Sabra11G0046100 Salix brachista HOM05D004704 ORTHO05D005384 3.1e-07 59.3 42 69.0
Glyma.13G231200 Glycine max HOM05D004704 ORTHO05D005384 4.0e-07 58.9 43 65.1
Lsat_1_v5_gn_7_23201 Lactuca sativa HOM05D004704 ORTHO05D005384 4.0e-07 58.9 42 66.7
Duzib235G1356 Durio zibethinus HOM05D004704 ORTHO05D005384 6.8e-07 58.2 46 63.0
MBI06_g45390_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 6.8e-07 58.2 42 66.7
TWI38G0698 Tripterygium wilfordii HOM05D004704 ORTHO05D005384 6.8e-07 58.2 43 62.8
VMungo1080G1587 Vigna mungo HOM05D004704 ORTHO05D005384 6.8e-07 58.2 44 61.4
BraA03t14222Z Brassica rapa HOM05D004704 ORTHO05D005384 8.9e-07 57.8 42 64.3
Potri.011G064300 Populus trichocarpa HOM05D004704 ORTHO05D005384 8.9e-07 57.8 42 66.7
Gohir.D06G134300 Gossypium hirsutum HOM05D004704 ORTHO05D005384 1.2e-06 57.4 42 66.7
Manes.17G053900 Manihot esculenta HOM05D004704 ORTHO05D005384 1.2e-06 57.4 43 65.1
Potri.004G054500 Populus trichocarpa HOM05D004704 ORTHO05D005384 1.2e-06 57.4 42 64.3
Sabra04G0035600 Salix brachista HOM05D004704 ORTHO05D005384 1.2e-06 57.4 195 30.3
TAR627G0576 Trochodendron aralioides HOM05D004704 ORTHO05D005384 1.2e-06 57.4 40 67.5
TAR627G1005 Trochodendron aralioides HOM05D004704 ORTHO05D005384 1.2e-06 57.4 47 59.6
Duzib192G0914 Durio zibethinus HOM05D004704 ORTHO05D005384 2.0e-06 56.6 42 64.3
QL05p046090 Quercus lobata HOM05D004704 ORTHO05D005384 2.0e-06 56.6 182 30.8
SalBow8G1161 Salvia bowleyana HOM05D004704 ORTHO05D005384 2.0e-06 56.6 42 64.3
CDE02G3156 Ceratophyllum demersum HOM05D004704 ORTHO05D005384 2.6e-06 56.2 43 60.5
Gorai.010G156000 Gossypium raimondii HOM05D004704 ORTHO05D005384 2.6e-06 56.2 42 64.3
Nn1g04361 Nelumbo nucifera HOM05D004704 ORTHO05D005384 2.6e-06 56.2 42 64.3
Oeu062343.1 Olea europaea HOM05D004704 ORTHO05D005384 2.6e-06 56.2 42 61.9
TAR629G2327 Trochodendron aralioides HOM05D004704 ORTHO05D005384 2.6e-06 56.2 40 62.5
TAR629G2609 Trochodendron aralioides HOM05D004704 ORTHO05D005384 2.6e-06 56.2 40 62.5
Thhalv10024794m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 3.4e-06 55.8 42 64.3
Glyma.12G209400 Glycine max HOM05D004704 ORTHO05D005384 3.4e-06 55.8 44 56.8
Thecc.06G174000 Theobroma cacao HOM05D004704 ORTHO05D005384 3.4e-06 55.8 42 64.3
TAR627G0020 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.4e-06 55.8 40 65.0
TAR706G0003 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.4e-06 55.8 40 65.0
CiPaw.09G067800 Carya illinoinensis HOM05D004704 ORTHO05D005384 4.4e-06 55.5 40 60.0
Ca_01465_v3 Cicer arietinum L. HOM05D004704 ORTHO05D005384 4.4e-06 55.5 44 59.1
DCAR_028021 Daucus carota HOM05D004704 ORTHO05D005384 4.4e-06 55.5 42 57.1
Lalb_Chr14g0367381 Lupinus albus HOM05D004704 ORTHO05D005384 4.4e-06 55.5 44 59.1
PSO063G2883 Papaver somniferum HOM05D004704 ORTHO05D005384 4.4e-06 55.5 42 64.3
PSO782G0854 Papaver somniferum HOM05D004704 ORTHO05D005384 4.4e-06 55.5 42 64.3
PSO782G0987 Papaver somniferum HOM05D004704 ORTHO05D005384 4.4e-06 55.5 42 64.3
SalBow2G1262 Salvia bowleyana HOM05D004704 ORTHO05D005384 4.4e-06 55.5 42 64.3
MELO3C007223.2 Cucumis melo HOM05D004704 ORTHO05D005384 5.8e-06 55.1 42 61.9
ECA236G1293 Erigeron canadensis HOM05D004704 ORTHO05D005384 5.8e-06 55.1 40 67.5
QL04p061454 Quercus lobata HOM05D004704 ORTHO05D005384 5.8e-06 55.1 47 59.6
Sp7g15490 Schrenkiella parvula HOM05D004704 ORTHO05D005384 5.8e-06 55.1 42 61.9
Aqoxy1G03204 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 7.6e-06 54.7 42 61.9
BcaNung02719 Brassica carinata HOM05D004704 ORTHO05D005384 7.6e-06 54.7 42 61.9
A03p51400 Brassica napus HOM05D004704 ORTHO05D005384 7.6e-06 54.7 42 61.9
C07p49820 Brassica napus HOM05D004704 ORTHO05D005384 7.6e-06 54.7 42 61.9
BolC7t45484H Brassica oleracea HOM05D004704 ORTHO05D005384 7.6e-06 54.7 42 61.9
ClCG01G023620 Citrullus lanatus HOM05D004704 ORTHO05D005384 7.6e-06 54.7 42 61.9
CsaV3_6G050770 Cucumis sativus L. HOM05D004704 ORTHO05D005384 7.6e-06 54.7 40 62.5
Glyma.13G291900 Glycine max HOM05D004704 ORTHO05D005384 7.6e-06 54.7 44 56.8
PGR004G2271 Punica granatum HOM05D004704 ORTHO05D005384 7.6e-06 54.7 42 61.9
Rhsim13G0106100 Rhododendron simsii HOM05D004704 ORTHO05D005384 7.6e-06 54.7 45 57.8
PSO063G6793 Papaver somniferum HOM05D004704 ORTHO05D005384 9.9e-06 54.3 42 61.9


User provided reference genes

Program Settings