Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003730g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.7e-135 483.8 242 100.0
Nitab4.5_0007875g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.3e-20 101.7 76 64.5
PGSC0003DMG400038711 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.2e-13 81.3 264 28.4
Nitab4.5_0000032g0500 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-13 80.9 240 29.2
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.4e-13 79.7 148 36.5
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-12 77.0 144 34.7
Nitab4.5_0000274g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-12 76.6 191 27.2
Nitab4.5_0003284g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-12 76.6 153 32.0
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-12 75.5 149 35.6
Nitab4.5_0004123g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-11 74.7 236 27.5
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-11 74.3 143 32.9
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.4e-11 72.4 246 28.9
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.0e-11 72.0 143 32.2
Nitab4.5_0000715g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.2e-11 71.6 138 34.8
Nitab4.5_0001907g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-10 71.2 247 30.0
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-10 70.5 146 34.2
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-10 70.1 256 28.5
Nitab4.5_0005100g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-10 70.1 143 33.6
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-10 68.9 179 31.8
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-10 68.9 154 34.4
Nitab4.5_0000102g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.7e-10 68.6 241 26.6
Nitab4.5_0007825g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.7e-10 68.6 220 29.5
Sopen10g022630 Solanum pennellii HOM05D000024 ORTHO05D000007 7.7e-10 68.6 68 51.5
Nitab4.5_0003178g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-09 68.2 196 28.1
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-09 67.8 143 30.8
Nitab4.5_0001704g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-09 67.8 137 32.8
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.0e-09 65.9 142 33.1
Nitab4.5_0003397g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.6e-09 65.5 131 32.8
Nitab4.5_0000637g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000022 1.1e-08 64.7 133 30.1
Nitab4.5_0003102g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-08 64.7 129 31.8
Nitab4.5_0005584g0050 Nicotiana tabacum HOM05D000077 ORTHO05D000339 1.1e-08 64.7 179 33.0
Nitab4.5_0000258g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-08 63.9 137 35.0
Nitab4.5_0005246g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-08 63.2 172 30.2
Nitab4.5_0014470g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-08 63.2 148 30.4
Nitab4.5_0000712g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-08 62.8 144 31.9
Nitab4.5_0001444g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-08 62.8 122 35.2
Nitab4.5_0002284g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-08 62.8 125 32.8
Nitab4.5_0006025g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-08 62.8 157 29.9
Nitab4.5_0009832g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-08 62.4 125 33.6
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-08 62.0 162 32.1
Nitab4.5_0003024g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 61.2 136 31.6
Nitab4.5_0003208g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 61.2 242 26.0
Nitab4.5_0009471g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 61.2 139 33.8
PGSC0003DMG400024826 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.6e-07 60.8 76 42.1
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-07 60.5 137 33.6
Nitab4.5_0003347g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-07 60.5 148 27.7
Nitab4.5_0006080g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-07 60.1 140 28.6
Nitab4.5_0002416g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-07 59.3 79 43.0
Nitab4.5_0005560g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-07 59.3 127 32.3
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-07 58.9 127 35.4
Nitab4.5_0003185g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-07 58.9 263 25.5
PGSC0003DMG400042385 Solanum tuberosum HOM05D000024 ORTHO05D000007 6.1e-07 58.9 148 30.4
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-07 58.5 147 29.9
Nitab4.5_0000149g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 58.2 149 28.2
Nitab4.5_0002586g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 58.2 145 30.3
Nitab4.5_0005004g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 58.2 250 23.6
Nitab4.5_0005065g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 58.2 128 31.2
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 58.2 125 36.0
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-06 58.2 149 25.5
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 57.8 235 25.5
Nitab4.5_0011342g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-06 56.6 88 37.5
Nitab4.5_0000002g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-06 56.2 262 25.6
Nitab4.5_0000177g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-06 56.2 123 31.7
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-06 56.2 146 30.1
Nitab4.5_0000902g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-06 55.8 147 29.9
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 5.2e-06 55.8 149 24.8
Nitab4.5_0000818g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-06 55.5 150 27.3
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 6.8e-06 55.5 149 24.2
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 6.8e-06 55.5 149 24.2
Nitab4.5_0000213g0210 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-06 55.1 76 38.2
Nitab4.5_0000654g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-06 55.1 133 30.8
Nitab4.5_0003810g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-06 55.1 65 38.5
Nitab4.5_0011088g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-06 55.1 139 32.4
PGSC0003DMG400013852 Solanum tuberosum HOM05D000024 ORTHO05D000007 8.9e-06 55.1 154 31.2


User provided reference genes

Program Settings