Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 4.4e-280 967.2 462 100.0
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 1.1e-259 899.4 461 93.3
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 2.2e-223 778.9 460 83.7
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 4.2e-222 774.6 460 83.5
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 2.3e-204 715.7 458 77.3
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 8.5e-175 617.5 468 66.0
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 1.2e-171 607.1 464 63.1
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 3.3e-166 589.0 457 63.9
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 1.4e-164 583.6 460 61.5
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 3.0e-164 582.4 458 62.0
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 7.5e-163 577.8 466 61.4
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 3.2e-161 572.4 457 59.7
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 2.0e-160 569.7 464 60.6
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 2.7e-160 569.3 464 61.6
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 5.9e-160 568.2 466 60.7
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 8.6e-159 564.3 465 60.6
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 1.9e-158 563.1 460 59.3
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 2.5e-158 562.8 456 61.4
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 2.5e-158 562.8 472 60.6
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.1e-157 559.7 466 61.2
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 6.2e-157 558.1 457 59.1
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.1e-156 555.8 467 59.3
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 8.9e-156 554.3 467 59.1
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 1.2e-155 553.9 468 58.3
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 2.0e-155 553.1 464 58.6
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 7.5e-155 551.2 470 58.3
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 1.3e-154 550.4 470 59.6
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 4.9e-154 548.5 464 60.1
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 6.4e-154 548.1 455 58.5
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 2.4e-153 546.2 467 58.7
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 8.6e-151 537.7 461 59.7
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 5.6e-150 535.0 462 57.4
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 1.2e-149 533.9 460 58.9
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 4.7e-149 531.9 460 61.3
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 5.2e-148 528.5 454 58.6
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 2.2e-146 523.1 467 57.4
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.1e-145 520.8 451 57.4
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 3.2e-145 519.2 461 56.0
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 1.2e-144 517.3 461 55.3
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 1.7e-143 513.5 478 55.2
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 1.5e-142 510.4 461 57.7
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 7.3e-142 508.1 481 55.7
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 2.8e-141 506.1 465 56.3
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 8.9e-140 501.1 454 55.3
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 2.0e-139 500.0 454 55.1
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 1.3e-138 497.3 453 54.5
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 1.7e-138 496.9 470 54.5
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 5.4e-137 491.9 473 54.1
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 2.7e-136 489.6 470 54.3
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 2.7e-136 489.6 460 54.6
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 3.5e-136 489.2 453 54.3
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 3.5e-136 489.2 479 53.9
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 7.8e-136 488.0 464 53.0
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 1.0e-135 487.6 475 53.9
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 1.3e-135 487.3 458 54.1
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.7e-135 486.9 453 54.7
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.0e-135 486.1 453 54.1
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 8.6e-135 484.6 467 52.5
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 1.1e-134 484.2 474 52.7
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 1.1e-134 484.2 451 54.3
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 9.6e-134 481.1 453 54.1
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 4.0e-132 475.7 453 53.4
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 5.8e-131 471.9 451 52.8
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 4.9e-130 468.8 457 52.3
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 8.4e-130 468.0 423 57.4
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 1.1e-129 467.6 464 51.3
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 1.9e-129 466.8 458 52.8
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 4.2e-129 465.7 464 51.3
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 5.4e-129 465.3 464 51.7
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 4.6e-128 462.2 454 52.9
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 4.6e-128 462.2 465 51.4
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 7.3e-126 454.9 451 54.5
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 1.7e-122 443.7 459 50.3
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.2e-120 437.6 478 48.3
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 1.1e-118 431.0 458 48.5
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 1.4e-116 424.1 324 64.8
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 4.0e-116 422.5 456 47.1
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 2.0e-115 420.2 489 46.2
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 7.6e-115 418.3 446 50.4
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 2.2e-114 416.8 456 49.6
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 4.9e-114 415.6 455 47.3
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 4.2e-113 412.5 440 50.2
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 1.1e-110 404.4 442 48.4
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 1.1e-110 404.4 411 50.1
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 3.3e-110 402.9 453 48.1
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 7.4e-110 401.7 458 49.3
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 1.2e-107 394.4 460 48.3
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 4.5e-107 392.5 441 47.6
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 4.2e-105 386.0 454 45.8
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 2.3e-103 380.2 451 47.0
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 2.3e-103 380.2 451 47.0
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 1.8e-100 370.5 274 67.2
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 2.4e-100 370.2 316 60.4
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 6.5e-98 362.1 451 45.2
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 1.4e-97 360.9 441 46.0
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 4.2e-97 359.4 457 44.6
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 5.5e-97 359.0 470 42.1
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 2.1e-96 357.1 451 44.3
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 2.7e-88 330.1 367 47.1
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 8.8e-87 325.1 439 43.5
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 2.0e-83 313.9 315 53.3
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 2.5e-73 280.4 483 35.8
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.2e-66 257.3 287 47.7
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 2.6e-62 243.8 336 41.7
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 3.7e-61 240.0 246 50.0
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 3.7e-61 240.0 523 31.9
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 2.7e-59 233.8 235 52.3
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 8.6e-50 202.2 382 33.8
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 1.9e-41 174.5 454 28.0
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.0e-38 164.5 146 54.1
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 3.9e-34 150.2 546 24.9
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.4e-28 131.7 201 39.3
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 1.2e-27 128.6 89 69.7
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.3e-26 125.2 129 45.0
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 5.1e-26 123.2 121 51.2
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 7.3e-25 119.4 89 67.4
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 7.3e-25 119.4 105 52.4
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 2.8e-24 117.5 91 60.4
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 5.2e-23 113.2 100 56.0
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 9.9e-22 109.0 168 38.1
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 5.4e-20 103.2 138 47.8
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 7.1e-20 102.8 87 52.9
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 8.1e-16 89.4 91 42.9
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.8e-15 88.2 66 59.1
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 3.4e-14 84.0 299 28.4
SalBow4G1020 Salvia bowleyana HOM05D006323 ORTHO05D007827 1.4e-07 62.0 48 66.7


User provided reference genes

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