Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003711g0050 Nicotiana tabacum HOM05D001767 ORTHO05D001714 2.8e-34 148.7 115 100.0
Migut.H01435 Erythranthe guttata HOM05D001767 ORTHO05D001714 1.5e-11 73.2 51 68.6
Solyc02g076800.1 Solanum lycopersicum HOM05D001767 ORTHO05D001714 3.3e-11 72.0 51 66.7
Sopen02g021700 Solanum pennellii HOM05D001767 ORTHO05D001714 3.3e-11 72.0 51 66.7
Peaxi162Scf01979g00003 Petunia axillaris HOM05D001767 ORTHO05D001714 9.7e-11 70.5 51 72.5
MSTRG.14735 Avicennia marina HOM05D001767 ORTHO05D001714 1.7e-10 69.7 51 66.7
HanXRQChr17g0565091 Helianthus annuus HOM05D001767 ORTHO05D001714 2.2e-10 69.3 52 67.3
Nitab4.5_0012052g0010 Nicotiana tabacum HOM05D001767 ORTHO05D001714 2.2e-10 69.3 51 66.7
CSS0012076 Camellia sinensis var. sinensis HOM05D001767 ORTHO05D001714 2.8e-10 68.9 51 66.7
SalBow7G3903 Salvia bowleyana HOM05D001767 ORTHO05D001714 2.8e-10 68.9 51 64.7
Oeu041767.1 Olea europaea HOM05D001767 ORTHO05D001714 3.7e-10 68.6 51 66.7
SalBow8G3465 Salvia bowleyana HOM05D001767 ORTHO05D001714 3.7e-10 68.6 51 62.7
Dinv16774 Davidia involucrata HOM05D001767 ORTHO05D001714 6.3e-10 67.8 51 64.7
Migut.M01036 Erythranthe guttata HOM05D001767 ORTHO05D001714 6.3e-10 67.8 51 62.7
FvH4_3g07740 Fragaria vesca HOM05D001767 ORTHO05D001714 6.3e-10 67.8 51 66.7
FAN11G1865 Fragaria x ananassa HOM05D001767 ORTHO05D001714 6.3e-10 67.8 51 66.7
FAN16G1800 Fragaria x ananassa HOM05D001767 ORTHO05D001714 6.3e-10 67.8 51 66.7
FAN21G0775 Fragaria x ananassa HOM05D001767 ORTHO05D001714 6.3e-10 67.8 51 66.7
FAN25G1376 Fragaria x ananassa HOM05D001767 ORTHO05D001714 6.3e-10 67.8 51 66.7
Lsat_1_v5_gn_4_49061 Lactuca sativa HOM05D001767 ORTHO05D001714 6.3e-10 67.8 52 65.4
RcHm_v2.0_Chr5g0010861 Rosa chinensis HOM05D001767 ORTHO05D001714 6.3e-10 67.8 51 66.7
Eucgr.D00486 Eucalyptus grandis HOM05D001767 ORTHO05D001714 8.2e-10 67.4 51 66.7
Glyma.05G158500 Glycine max HOM05D001767 ORTHO05D001714 8.2e-10 67.4 51 62.7
Oeu034631.1 Olea europaea HOM05D001767 ORTHO05D001714 8.2e-10 67.4 51 66.7
MELO3C002655.2 Cucumis melo HOM05D001767 ORTHO05D001714 1.1e-09 67.0 51 62.7
HanXRQChr16g0518651 Helianthus annuus HOM05D001767 ORTHO05D001714 1.4e-09 66.6 52 63.5
Nitab4.5_0002076g0030 Nicotiana tabacum HOM05D001767 ORTHO05D001714 1.8e-09 66.2 77 83.1
MSTRG.13223 Avicennia marina HOM05D001767 ORTHO05D001714 2.4e-09 65.9 50 64.0
PGSC0003DMG400004388 Solanum tuberosum HOM05D001767 ORTHO05D001714 3.1e-09 65.5 105 61.0
ECA234G1876 Erigeron canadensis HOM05D001767 ORTHO05D001714 4.1e-09 65.1 52 61.5
Glyma.15G083000 Glycine max HOM05D001767 ORTHO05D001714 4.1e-09 65.1 51 62.7
Lj6g0023027 Lotus japonicus HOM05D001767 ORTHO05D001714 4.1e-09 65.1 51 62.7
TAR624G0193 Trochodendron aralioides HOM05D001767 ORTHO05D001714 4.1e-09 65.1 51 64.7
GSVIVG01021218001 Vitis vinifera HOM05D001767 ORTHO05D001714 5.3e-09 64.7 51 62.7
Duzib160G0244 Durio zibethinus HOM05D001767 ORTHO05D001714 6.9e-09 64.3 51 64.7
Lj1P1192T21 Lonicera japonica HOM05D001767 ORTHO05D001714 6.9e-09 64.3 51 62.7
MD05G1300400 Malus domestica HOM05D001767 ORTHO05D001714 6.9e-09 64.3 51 64.7
MD10G1279500 Malus domestica HOM05D001767 ORTHO05D001714 6.9e-09 64.3 51 64.7
Medtr2g016150 Medicago truncatula HOM05D001767 ORTHO05D001714 6.9e-09 64.3 51 60.8
Nn1g09120 Nelumbo nucifera HOM05D001767 ORTHO05D001714 6.9e-09 64.3 51 62.7
Thecc.06G170200 Theobroma cacao HOM05D001767 ORTHO05D001714 6.9e-09 64.3 51 64.7
MSTRG.7411 Avicennia marina HOM05D001767 ORTHO05D001714 9.1e-09 63.9 51 62.7
Duzib192G0143 Durio zibethinus HOM05D001767 ORTHO05D001714 9.1e-09 63.9 50 66.0
Duzib235G0814 Durio zibethinus HOM05D001767 ORTHO05D001714 9.1e-09 63.9 50 66.0
Glyma.13G229500 Glycine max HOM05D001767 ORTHO05D001714 9.1e-09 63.9 51 60.8
Phvul.006G175900 Phaseolus vulgaris HOM05D001767 ORTHO05D001714 9.1e-09 63.9 51 60.8
TWI63G1557 Tripterygium wilfordii HOM05D001767 ORTHO05D001714 9.1e-09 63.9 51 62.7
Cfa000611 Carpinus fangiana HOM05D001767 ORTHO05D001714 1.2e-08 63.5 51 64.7
Haze_06227 Corylus avellana HOM05D001767 ORTHO05D001714 1.2e-08 63.5 51 64.7
QL05p047295 Quercus lobata HOM05D001767 ORTHO05D001714 1.2e-08 63.5 51 64.7
Atru.chr10.1660 Acer truncatum HOM05D001767 ORTHO05D001714 1.5e-08 63.2 50 64.0
Atru.chr10.1661 Acer truncatum HOM05D001767 ORTHO05D001714 1.5e-08 63.2 50 64.0
Ciclev10016924m.g Citrus clementina HOM05D001767 ORTHO05D001714 1.5e-08 63.2 51 60.8
CsaV3_1G033300 Cucumis sativus L. HOM05D001767 ORTHO05D001714 1.5e-08 63.2 51 62.7
Psat1g197920 Pisum sativum HOM05D001767 ORTHO05D001714 1.5e-08 63.2 51 60.8
Prupe.4G061900 Prunus persica HOM05D001767 ORTHO05D001714 1.5e-08 63.2 51 62.7
Sed0022533 Sechium edule HOM05D001767 ORTHO05D001714 1.5e-08 63.2 51 62.7
ClCG03G007660 Citrullus lanatus HOM05D001767 ORTHO05D001714 2.0e-08 62.8 51 62.7
DCAR_004004 Daucus carota HOM05D001767 ORTHO05D001714 2.0e-08 62.8 51 58.8
Rhsim13G0189800 Rhododendron simsii HOM05D001767 ORTHO05D001714 2.0e-08 62.8 51 60.8
TPR.G11647 Trifolium pratense HOM05D001767 ORTHO05D001714 2.0e-08 62.8 51 58.8
VMungo0540G2071 Vigna mungo HOM05D001767 ORTHO05D001714 2.0e-08 62.8 51 58.8
Manes.17G056100 Manihot esculenta HOM05D001767 ORTHO05D001714 2.6e-08 62.4 51 60.8
CARHR028500 Cardamine hirsuta HOM05D001767 ORTHO05D001714 3.4e-08 62.0 50 60.0
Dinv40680 Davidia involucrata HOM05D001767 ORTHO05D001714 3.4e-08 62.0 51 58.8
Nn1g04422 Nelumbo nucifera HOM05D001767 ORTHO05D001714 3.4e-08 62.0 50 62.0
Oeu043110.1 Olea europaea HOM05D001767 ORTHO05D001714 3.4e-08 62.0 51 62.7
Potri.004G057500 Populus trichocarpa HOM05D001767 ORTHO05D001714 3.4e-08 62.0 50 62.0
Sabra04G0037200 Salix brachista HOM05D001767 ORTHO05D001714 3.4e-08 62.0 50 62.0
CiPaw.10G059300 Carya illinoinensis HOM05D001767 ORTHO05D001714 4.5e-08 61.6 51 62.7
COL.COLO4_31289 Corchorus olitorius HOM05D001767 ORTHO05D001714 4.5e-08 61.6 51 60.8
PGR042G0320 Punica granatum HOM05D001767 ORTHO05D001714 4.5e-08 61.6 51 58.8
BcaB03g12144 Brassica carinata HOM05D001767 ORTHO05D001714 5.9e-08 61.2 50 62.0
CiPaw.09G070100 Carya illinoinensis HOM05D001767 ORTHO05D001714 5.9e-08 61.2 51 62.7
Ca_00438_v3 Cicer arietinum L. HOM05D001767 ORTHO05D001714 5.9e-08 61.2 51 58.8
ClCG01G023750 Citrullus lanatus HOM05D001767 ORTHO05D000636 5.9e-08 61.2 51 60.8
CsaV3_6G050920 Cucumis sativus L. HOM05D001767 ORTHO05D001714 5.9e-08 61.2 51 60.8
DCAR_007944 Daucus carota HOM05D001767 ORTHO05D001714 5.9e-08 61.2 51 56.9
Gohir.A10G036900 Gossypium hirsutum HOM05D001767 ORTHO05D001714 5.9e-08 61.2 51 60.8
Gohir.D10G037500 Gossypium hirsutum HOM05D001767 ORTHO05D001714 5.9e-08 61.2 51 60.8
Gorai.011G039500 Gossypium raimondii HOM05D001767 ORTHO05D001714 5.9e-08 61.2 51 60.8
Oeu043109.1 Olea europaea HOM05D001767 ORTHO05D001714 5.9e-08 61.2 51 62.7
PGR031G1155 Punica granatum HOM05D001767 ORTHO05D001714 5.9e-08 61.2 50 64.0
TWI38G1823 Tripterygium wilfordii HOM05D001767 ORTHO05D001714 5.9e-08 61.2 50 62.0
Carub.0001s2738 Capsella rubella HOM05D001767 ORTHO05D001714 7.7e-08 60.8 50 60.0
Gohir.A06G131100 Gossypium hirsutum HOM05D001767 ORTHO05D001714 7.7e-08 60.8 51 60.8
Gohir.D06G137200 Gossypium hirsutum HOM05D001767 ORTHO05D001714 7.7e-08 60.8 51 60.8
Gorai.010G159400 Gossypium raimondii HOM05D001767 ORTHO05D001714 7.7e-08 60.8 51 60.8
Potri.011G066500 Populus trichocarpa HOM05D001767 ORTHO05D001714 7.7e-08 60.8 50 62.0
Sabra11G0048100 Salix brachista HOM05D001767 ORTHO05D001714 7.7e-08 60.8 50 62.0
Sed0005326 Sechium edule HOM05D001767 ORTHO05D001714 7.7e-08 60.8 51 66.7
DCAR_005215 Daucus carota HOM05D001767 ORTHO05D001714 1.3e-07 60.1 51 54.9
Glyma.08G116200 Glycine max HOM05D001767 ORTHO05D001714 1.3e-07 60.1 51 60.8
Manes.16G040300 Manihot esculenta HOM05D001767 ORTHO05D001714 1.3e-07 60.1 51 60.8
VMungo0251G0081 Vigna mungo HOM05D001767 ORTHO05D001714 1.7e-07 59.7 51 58.8
AL1G42910 Arabidopsis lyrata HOM05D001767 ORTHO05D001714 2.2e-07 59.3 50 64.0
AT1G29195 Arabidopsis thaliana HOM05D001767 ORTHO05D001714 2.2e-07 59.3 50 64.0
BcaB03g13898 Brassica carinata HOM05D001767 ORTHO05D001714 2.2e-07 59.3 50 62.0
BcaC01g00081 Brassica carinata HOM05D001767 ORTHO05D001714 2.2e-07 59.3 50 60.0
BcaC06g35409 Brassica carinata HOM05D001767 ORTHO05D001714 2.2e-07 59.3 50 62.0
A08p25260 Brassica napus HOM05D001767 ORTHO05D001714 2.2e-07 59.3 50 60.0
BolC3t19815H Brassica oleracea HOM05D001767 ORTHO05D001714 2.2e-07 59.3 50 60.0
BolC7t42149H Brassica oleracea HOM05D001767 ORTHO05D001714 2.2e-07 59.3 50 62.0
BraA08t34478Z Brassica rapa HOM05D001767 ORTHO05D001714 2.2e-07 59.3 50 60.0
TAR626G0913 Trochodendron aralioides HOM05D001767 ORTHO05D001714 2.2e-07 59.3 51 58.8
Lj2P301T47 Lonicera japonica HOM05D001767 ORTHO05D001714 2.9e-07 58.9 49 61.2
arahy.Tifrunner.gnm1.ann1.2VSR2R Arachis hypogaea HOM05D001767 ORTHO05D001714 3.8e-07 58.5 51 58.8
arahy.Tifrunner.gnm1.ann1.GZFQ7P Arachis hypogaea HOM05D001767 ORTHO05D001714 3.8e-07 58.5 51 58.8
Hma1.2p1_0333F.1_g128060 Hydrangea macrophylla HOM05D001767 ORTHO05D001714 3.8e-07 58.5 51 60.8
Phvul.002G238700 Phaseolus vulgaris HOM05D001767 ORTHO05D001714 3.8e-07 58.5 51 58.8
Sp1g25110 Schrenkiella parvula HOM05D001767 ORTHO05D001714 3.8e-07 58.5 51 60.8
Solyc03g006160.1 Solanum lycopersicum HOM05D001767 ORTHO05D001714 3.8e-07 58.5 51 80.4
Lalb_Chr12g0205111 Lupinus albus HOM05D001767 ORTHO05D001714 5.0e-07 58.2 51 58.8
Aa31LG6G6340 Aethionema arabicum HOM05D001767 ORTHO05D001714 6.5e-07 57.8 50 60.0
C07p16500 Brassica napus HOM05D001767 ORTHO05D001714 6.5e-07 57.8 50 60.0
C03p75580 Brassica napus HOM05D001767 ORTHO05D001714 1.9e-06 56.2 50 60.0
Thhalv10008836m.g Eutrema salsugineum HOM05D001767 ORTHO05D001714 1.9e-06 56.2 52 78.8
THA.LOC104814258 Tarenaya hassleriana HOM05D001767 ORTHO05D001714 1.9e-06 56.2 54 53.7
Aqoxy4G00332 Aquilegia oxysepala HOM05D001767 ORTHO05D001714 2.5e-06 55.8 51 52.9
EL10Ac8g20594 Beta vulgaris HOM05D001767 ORTHO05D001714 2.5e-06 55.8 51 52.9
Oeu039918.1 Olea europaea HOM05D001767 ORTHO05D001714 2.5e-06 55.8 51 56.9
A07p10900 Brassica napus HOM05D001767 ORTHO05D001714 4.2e-06 55.1 50 60.0
BraA07t28879Z Brassica rapa HOM05D001767 ORTHO05D001714 4.2e-06 55.1 50 60.0
AUR62027684 Chenopodium quinoa HOM05D001767 ORTHO05D001714 4.2e-06 55.1 52 53.8
AUR62031213 Chenopodium quinoa HOM05D001767 ORTHO05D001714 4.2e-06 55.1 52 53.8
TAR452G0002 Trochodendron aralioides HOM05D001767 ORTHO05D001714 4.2e-06 55.1 51 54.9
unitig_578.g16452 Utricularia gibba HOM05D001767 ORTHO05D001714 5.5e-06 54.7 51 51.0
PSO229G0155 Papaver somniferum HOM05D001767 ORTHO05D001714 7.2e-06 54.3 50 58.0
PSO675G6814 Papaver somniferum HOM05D001767 ORTHO05D001714 7.2e-06 54.3 50 58.0
Ah.09g233280 Amaranthus hybridus HOM05D001767 ORTHO05D001714 9.4e-06 53.9 54 50.0


User provided reference genes

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