Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 8.6e-207 723.4 361 100.0
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 6.5e-178 627.5 329 93.9
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 1.1e-169 600.1 329 89.7
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 2.7e-168 595.5 329 89.7
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 3.9e-167 591.7 329 89.4
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 9.7e-166 587.0 329 88.8
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 7.9e-160 567.4 329 86.0
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 6.8e-127 458.0 330 70.0
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 3.8e-122 442.2 329 69.0
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 4.3e-121 438.7 329 68.1
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 7.3e-121 438.0 329 66.0
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 1.2e-120 437.2 330 65.5
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.8e-120 436.0 329 65.3
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 7.0e-116 421.4 329 65.3
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 7.0e-116 421.4 329 65.3
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 1.2e-115 420.6 342 61.4
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 1.7e-114 416.8 338 62.7
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 3.0e-114 416.0 327 62.1
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 2.5e-113 412.9 328 64.6
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 1.6e-112 410.2 330 60.9
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 4.7e-112 408.7 330 60.0
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 4.7e-112 408.7 332 62.3
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 3.4e-110 402.5 329 61.7
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.7e-109 400.2 332 58.7
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 4.9e-109 398.7 328 61.3
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 8.3e-109 397.9 332 58.4
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.1e-108 397.5 332 58.1
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 3.2e-108 396.0 330 60.0
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 9.2e-108 394.4 329 58.4
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 2.7e-107 392.9 331 63.4
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 7.8e-107 391.3 307 63.2
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 1.0e-106 391.0 329 59.9
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 1.3e-106 390.6 342 58.2
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 3.0e-106 389.4 329 59.0
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 3.0e-106 389.4 330 59.7
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 3.0e-106 389.4 329 59.3
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 1.1e-105 387.5 329 57.4
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 9.5e-105 384.4 335 57.9
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 2.1e-104 383.3 330 57.9
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 1.4e-103 380.6 329 57.8
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.4e-103 380.6 329 58.7
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 1.4e-103 380.6 319 59.9
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 2.3e-103 379.8 329 58.4
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 4.0e-103 379.0 330 57.3
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 5.2e-103 378.6 329 57.8
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 2.0e-102 376.7 345 54.5
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 2.0e-102 376.7 327 56.6
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 2.0e-102 376.7 332 56.0
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 2.6e-102 376.3 334 57.2
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 4.4e-102 375.6 326 57.1
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 1.7e-101 373.6 326 57.7
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 2.9e-101 372.9 327 56.6
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 3.7e-101 372.5 329 55.6
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 6.4e-101 371.7 331 56.8
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 1.1e-100 370.9 350 54.6
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 1.9e-100 370.2 327 55.4
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 1.9e-100 370.2 331 56.5
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.2e-100 369.4 330 57.6
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 3.2e-100 369.4 330 56.4
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 1.6e-99 367.1 334 56.6
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 2.1e-99 366.7 333 56.2
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 3.5e-99 365.9 334 55.7
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 7.8e-99 364.8 329 55.6
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 7.8e-99 364.8 330 57.6
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 1.0e-98 364.4 330 57.0
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 3.0e-98 362.8 334 58.7
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 1.9e-97 360.1 336 55.4
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 9.5e-97 357.8 333 55.0
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 1.6e-96 357.1 333 53.5
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 8.1e-96 354.8 327 56.0
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.1e-95 354.4 338 55.9
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.4e-95 354.0 338 55.0
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.0e-94 350.1 328 55.8
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.6e-94 349.7 328 55.8
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 2.6e-94 349.7 309 58.9
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 4.4e-94 349.0 331 56.2
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 3.8e-93 345.9 329 55.0
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 2.4e-92 343.2 331 54.1
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.4e-92 343.2 338 54.1
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 2.4e-92 343.2 378 51.1
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 3.2e-92 342.8 331 55.6
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 3.2e-92 342.8 331 55.6
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 4.1e-92 342.4 304 59.5
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 9.2e-92 341.3 295 58.3
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 7.8e-91 338.2 329 52.9
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 7.8e-91 338.2 330 53.9
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.6e-88 330.5 292 57.9
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 3.6e-88 329.3 293 56.7
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 3.8e-85 319.3 277 58.5
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 1.0e-82 311.2 335 51.0
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 1.3e-82 310.8 336 50.6
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 1.6e-75 287.3 325 48.6
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 1.8e-74 283.9 331 45.9
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 1.1e-73 281.2 334 50.3
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 7.4e-73 278.5 268 52.2
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 9.6e-73 278.1 331 48.9
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 3.4e-70 269.6 333 42.0
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 9.9e-70 268.1 363 43.0
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 6.4e-69 265.4 339 44.2
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 7.1e-68 261.9 260 52.7
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 2.7e-67 260.0 181 72.4
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 8.7e-66 255.0 335 43.0
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 2.0e-62 243.8 215 59.1
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 3.5e-59 233.0 384 38.3
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 2.0e-54 217.2 384 36.2
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 3.7e-48 196.4 139 68.3
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.5e-46 191.0 166 60.8
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 9.7e-41 171.8 133 63.9
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 7.9e-35 152.1 133 54.9
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 1.0e-34 151.8 123 61.8
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 5.2e-34 149.4 121 62.8
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.5e-33 147.9 204 41.2
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 7.4e-33 145.6 324 32.1
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 7.0e-31 139.0 117 54.7
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 1.9e-28 131.0 86 69.8
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 3.6e-27 126.7 136 52.2
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 4.1e-23 113.2 96 54.2
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 5.0e-21 106.3 140 44.3
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 6.8e-18 95.9 122 44.3
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.3e-16 91.7 59 72.9
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 2.0e-14 84.3 321 25.2
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 2.3e-13 80.9 67 55.2
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 3.0e-10 70.5 103 38.8
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 3.4e-09 67.0 50 58.0
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 9.2e-07 58.9 47 55.3


User provided reference genes

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