Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 6.9e-159 563.9 283 100.0
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.4e-151 539.7 294 93.5
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 7.9e-147 523.9 277 94.6
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 7.4e-145 517.3 292 90.1
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 9.0e-143 510.4 278 91.4
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 1.5e-142 509.6 292 89.0
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 7.6e-142 507.3 275 91.6
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 7.6e-142 507.3 279 88.2
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 1.7e-141 506.1 279 88.9
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 2.2e-141 505.8 279 88.2
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 3.8e-141 505.0 294 88.4
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 4.9e-141 504.6 279 88.5
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 6.5e-141 504.2 279 90.0
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 4.2e-140 501.5 278 88.5
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 9.3e-140 500.4 279 88.2
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 1.6e-139 499.6 280 87.5
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 6.0e-139 497.7 280 86.1
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 6.7e-138 494.2 281 87.9
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 6.7e-138 494.2 279 86.0
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 8.7e-138 493.8 279 85.3
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 8.7e-138 493.8 279 86.0
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 1.1e-137 493.4 278 87.1
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.5e-137 493.0 279 85.3
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 1.9e-137 492.7 281 86.5
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 2.5e-137 492.3 280 85.7
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 3.3e-137 491.9 279 84.9
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 3.3e-137 491.9 279 84.9
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 3.3e-137 491.9 281 88.3
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 5.7e-137 491.1 279 86.4
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 5.7e-137 491.1 279 84.9
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 7.4e-137 490.7 279 84.6
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 7.4e-137 490.7 279 84.6
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 7.4e-137 490.7 279 84.6
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 7.4e-137 490.7 279 84.9
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 7.4e-137 490.7 282 86.2
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 1.6e-136 489.6 283 85.2
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 1.6e-136 489.6 283 85.2
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 1.6e-136 489.6 279 86.0
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 2.2e-136 489.2 279 84.6
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 3.7e-136 488.4 279 84.2
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 4.8e-136 488.0 279 84.2
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 8.2e-136 487.3 279 84.2
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 8.2e-136 487.3 280 85.4
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 1.1e-135 486.9 280 85.4
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 1.1e-135 486.9 279 86.0
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 1.4e-135 486.5 279 83.9
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 1.4e-135 486.5 279 85.3
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 2.4e-135 485.7 279 83.9
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 3.1e-135 485.3 279 84.9
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 4.1e-135 485.0 279 83.5
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 5.3e-135 484.6 279 86.0
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 6.9e-135 484.2 280 85.0
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 6.9e-135 484.2 279 85.3
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 6.9e-135 484.2 291 85.6
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 1.5e-134 483.0 279 82.8
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 3.4e-134 481.9 279 83.2
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 3.4e-134 481.9 279 84.6
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 3.4e-134 481.9 279 82.8
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 4.5e-134 481.5 279 84.9
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 5.9e-134 481.1 279 82.8
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 7.6e-134 480.7 279 83.5
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 1.0e-133 480.3 277 82.7
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 1.0e-133 480.3 277 83.8
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 1.3e-133 479.9 275 85.1
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 2.9e-133 478.8 262 90.5
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 2.9e-133 478.8 283 83.7
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 3.8e-133 478.4 279 84.9
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 5.0e-133 478.0 274 84.3
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 6.5e-133 477.6 276 83.0
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 8.5e-133 477.2 279 84.6
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 1.4e-132 476.5 279 83.5
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 1.4e-132 476.5 278 83.8
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 1.4e-132 476.5 278 83.5
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 2.5e-132 475.7 279 82.8
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 2.5e-132 475.7 279 83.5
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 2.5e-132 475.7 291 82.8
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 2.5e-132 475.7 279 83.5
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 3.2e-132 475.3 279 83.9
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 4.2e-132 474.9 279 83.2
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 4.2e-132 474.9 281 83.6
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 4.2e-132 474.9 279 83.5
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 7.2e-132 474.2 280 83.2
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 9.3e-132 473.8 279 84.9
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.6e-131 473.0 279 82.8
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 3.6e-131 471.9 279 83.2
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 3.6e-131 471.9 279 84.6
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 6.1e-131 471.1 281 82.9
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 7.9e-131 470.7 281 82.2
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 1.0e-130 470.3 279 84.2
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 1.8e-130 469.5 279 83.2
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 5.1e-130 468.0 278 83.8
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 5.1e-130 468.0 277 84.1
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.3e-128 463.4 279 82.4
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 8.2e-128 460.7 279 82.1
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.4e-127 459.9 279 81.7
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 4.1e-127 458.4 280 80.7
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 6.9e-127 457.6 282 80.9
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 3.4e-126 455.3 278 82.4
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 4.5e-126 454.9 280 81.1
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 5.9e-126 454.5 280 81.1
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 5.9e-126 454.5 280 81.4
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 7.7e-126 454.1 281 79.0
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 2.9e-125 452.2 278 81.3
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 3.8e-125 451.8 292 78.8
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 3.8e-125 451.8 281 81.1
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 2.5e-124 449.1 281 80.1
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 2.5e-124 449.1 279 81.0
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 3.6e-123 445.3 280 80.0
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 4.7e-123 444.9 279 80.3
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 7.9e-123 444.1 278 80.6
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.9e-122 441.8 255 86.7
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 8.8e-122 440.7 361 65.7
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 1.1e-121 440.3 286 76.9
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 3.3e-121 438.7 308 74.0
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 1.3e-120 436.8 255 84.7
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 1.3e-120 436.8 278 77.7
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 1.7e-120 436.4 307 73.6
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 3.7e-120 435.3 282 77.0
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.8e-119 433.0 279 78.1
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 3.4e-118 428.7 280 75.7
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 3.8e-117 425.2 253 82.6
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 3.2e-116 422.2 243 85.6
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 1.2e-115 420.2 274 76.3
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 1.8e-111 406.4 218 90.4
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 7.0e-111 404.4 253 80.2
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 1.2e-110 403.7 218 89.9
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 1.1e-108 397.1 277 73.6
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.2e-107 393.7 215 88.4
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.2e-107 393.7 215 88.4
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 2.6e-105 386.0 272 69.1
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 3.1e-103 379.0 246 74.0
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 2.0e-102 376.3 248 74.2
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 4.5e-102 375.2 275 67.3
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 2.3e-98 362.8 215 86.5
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 4.0e-98 362.1 287 68.3
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 6.8e-98 361.3 214 82.2
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 2.0e-97 359.8 197 87.8
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 1.3e-96 357.1 248 69.0
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 3.4e-89 332.4 179 89.4
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 4.4e-89 332.0 179 91.1
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 5.7e-89 331.6 208 80.8
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 3.7e-80 302.4 171 86.5
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 3.5e-78 295.8 218 74.3
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 3.5e-78 295.8 181 81.8
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 2.2e-72 276.6 152 89.5
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 1.7e-64 250.4 194 65.5
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.9e-60 236.9 144 80.6
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 2.4e-58 229.9 209 62.2
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 7.1e-47 191.8 119 75.6
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 1.6e-46 190.7 241 47.3
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 5.6e-44 182.2 134 70.9
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 5.6e-44 182.2 134 70.9
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 5.3e-42 175.6 177 56.5
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 3.4e-41 172.9 105 78.1
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 1.3e-35 154.5 96 76.0
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 3.7e-35 152.9 86 83.7
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 1.0e-29 134.8 300 33.3
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.9e-29 132.9 88 73.9
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 5.1e-29 132.5 196 45.9
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 5.6e-28 129.0 81 76.5
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 1.8e-26 124.0 170 44.7
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 2.2e-24 117.1 66 87.9
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 2.2e-24 117.1 66 87.9
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 1.2e-17 94.7 154 41.6
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.0e-16 91.7 62 74.2
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 1.0e-16 91.7 62 74.2
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-16 91.3 82 58.5
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 1.1e-15 88.2 53 77.4
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 6.7e-13 79.0 79 54.4
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 5.7e-12 75.9 92 48.9
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 7.4e-12 75.5 110 41.8
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 2.2e-11 73.9 61 63.9
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 8.2e-11 72.0 60 66.7
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 3.1e-10 70.1 62 58.1
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 6.9e-10 68.9 103 41.7
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 7.7e-09 65.5 43 76.7
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 1.4e-07 61.2 57 52.6
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 2.5e-07 60.5 42 73.8
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.2e-07 60.1 34 79.4
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 3.6e-06 56.6 38 71.1
Solyc04g079010.1 Solanum lycopersicum HOM05D003815 ORTHO05D004580 6.1e-06 55.8 31 77.4


User provided reference genes

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