Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.1e-124 450.3 291 100.0
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 9.7e-108 394.0 292 80.1
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 2.3e-85 319.7 281 65.8
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 8.3e-75 284.6 303 63.0
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 5.0e-72 275.4 304 63.2
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 2.5e-71 273.1 302 63.2
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 4.1e-66 255.8 286 61.9
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 2.0e-52 210.3 297 44.4
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 2.9e-51 206.5 298 43.6
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 8.3e-51 204.9 291 47.4
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 4.1e-50 202.6 298 43.6
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 3.5e-49 199.5 301 44.2
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.1e-47 194.5 294 45.2
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 2.8e-46 189.9 291 42.3
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 9.2e-42 174.9 295 46.1
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 3.5e-41 172.9 286 40.2
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 3.0e-40 169.9 317 40.7
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 6.6e-40 168.7 293 44.4
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 1.1e-39 167.9 185 54.6
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 1.1e-39 167.9 335 40.9
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 1.9e-39 167.2 191 52.9
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 2.5e-39 166.8 211 46.9
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 5.6e-39 165.6 292 39.4
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 5.6e-39 165.6 313 39.6
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 7.3e-39 165.2 189 49.7
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 1.2e-38 164.5 286 43.7
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 1.2e-38 164.5 318 37.1
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 2.8e-38 163.3 212 47.2
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 3.6e-38 162.9 313 39.6
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 4.7e-38 162.5 198 50.0
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 6.2e-38 162.2 190 51.1
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 8.1e-38 161.8 193 47.7
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 1.8e-37 160.6 324 36.1
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 1.8e-37 160.6 190 50.0
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 1.8e-37 160.6 200 48.5
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 1.8e-37 160.6 200 48.5
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 3.1e-37 159.8 295 41.4
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 3.1e-37 159.8 185 57.8
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 4.0e-37 159.5 230 49.1
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 6.8e-37 158.7 283 40.3
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 1.2e-36 157.9 297 46.8
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 3.4e-36 156.4 311 44.4
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 3.4e-36 156.4 216 45.8
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 9.9e-36 154.8 334 37.1
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 2.2e-35 153.7 137 69.3
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 4.9e-35 152.5 189 58.7
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 6.4e-35 152.1 198 59.6
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.4e-34 151.0 138 55.8
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 1.4e-34 151.0 206 48.1
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 2.4e-34 150.2 206 49.5
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 4.2e-34 149.4 143 71.3
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 7.1e-34 148.7 160 62.5
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 7.1e-34 148.7 192 51.6
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 7.1e-34 148.7 129 64.3
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 7.1e-34 148.7 149 62.4
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 1.6e-33 147.5 184 48.9
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 2.7e-33 146.7 285 42.8
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 2.7e-33 146.7 130 70.8
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 7.8e-33 145.2 142 52.8
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 1.3e-32 144.4 135 68.1
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 1.7e-32 144.1 197 54.8
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 2.3e-32 143.7 190 52.6
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 3.0e-32 143.3 181 53.0
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 3.9e-32 142.9 217 53.5
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 8.7e-32 141.7 129 58.1
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 8.7e-32 141.7 129 57.4
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.1e-31 141.4 190 58.4
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.1e-31 141.4 190 58.4
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 1.1e-31 141.4 140 67.1
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 1.5e-31 141.0 139 66.2
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 3.3e-31 139.8 185 48.1
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 3.3e-31 139.8 179 50.3
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 4.3e-31 139.4 213 47.4
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 4.3e-31 139.4 160 65.0
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 4.3e-31 139.4 160 65.0
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 5.6e-31 139.0 134 61.2
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.1e-30 137.1 179 54.2
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 4.8e-30 136.0 160 63.1
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 1.1e-29 134.8 161 57.1
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 5.3e-29 132.5 118 62.7
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 1.5e-28 131.0 136 61.8
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 2.6e-28 130.2 141 54.6
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 2.6e-28 130.2 129 62.8
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 3.4e-28 129.8 148 64.2
Sopen06g034710 Solanum pennellii HOM05D005417 ORTHO05D002591 3.4e-28 129.8 141 61.7
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 7.6e-28 128.6 139 51.8
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 7.6e-28 128.6 164 52.4
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 1.3e-27 127.9 139 61.2
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 1.3e-27 127.9 152 54.6
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 1.7e-27 127.5 280 42.5
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 4.9e-27 125.9 114 57.0
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 8.4e-27 125.2 132 62.1
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 1.1e-26 124.8 148 63.5
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 1.1e-26 124.8 195 46.7
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 1.4e-26 124.4 126 62.7
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 2.4e-26 123.6 141 49.6
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 4.6e-25 119.4 150 60.7
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 7.8e-25 118.6 141 60.3
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 7.8e-25 118.6 143 55.9
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 7.8e-25 118.6 143 55.9
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 7.8e-25 118.6 143 55.9
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 1.3e-24 117.9 134 61.9
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 1.7e-24 117.5 138 64.5
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 1.7e-24 117.5 150 60.7
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 2.3e-24 117.1 145 51.0
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 3.0e-24 116.7 215 45.6
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 3.9e-24 116.3 149 60.4
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 5.1e-24 115.9 137 64.2
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 8.7e-24 115.2 142 52.1
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 1.1e-23 114.8 189 46.0
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 1.5e-23 114.4 152 48.0
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 4.3e-23 112.8 120 72.5
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 1.3e-22 111.3 141 61.0
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 1.3e-22 111.3 168 54.2
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 1.6e-22 110.9 141 51.8
Gohir.A07G161200 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.8e-22 110.2 140 49.3
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 8.1e-22 108.6 119 68.9
SGA_v2.0_scaffold3G01638 Striga asiatica HOM05D005417 ORTHO05D002591 1.4e-21 107.8 126 56.3
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 1.5e-20 104.4 178 40.4
HPP92_009946 Vanilla planifolia HOM05D005417 ORTHO05D002591 2.2e-19 100.5 132 43.9
SalBow5G5435 Salvia bowleyana HOM05D005417 ORTHO05D002591 1.3e-16 91.3 110 47.3
unitig_899.g15407 Utricularia gibba HOM05D005417 ORTHO05D002591 3.0e-16 90.1 126 54.0
TPR.G976 Trifolium pratense HOM05D005417 ORTHO05D002591 8.7e-16 88.6 103 47.6
Lj5g0025661 Lotus japonicus HOM05D005417 ORTHO05D002591 2.8e-14 83.6 179 41.9
TPR.G6388 Trifolium pratense HOM05D005417 ORTHO05D002591 2.8e-14 83.6 49 75.5
unitig_749.g13592 Utricularia gibba HOM05D005417 ORTHO05D002591 6.2e-14 82.4 128 44.5
AUR62016544 Chenopodium quinoa HOM05D005417 ORTHO05D002591 2.4e-13 80.5 219 28.3
Zm00001eb090480 Zea mays HOM05D005417 ORTHO05D002591 1.2e-12 78.2 159 49.7
Os11g0458100 Oryza sativa ssp. japonica HOM05D005417 ORTHO05D002591 1.4e-10 71.2 135 54.8
MELO3C021078.2 Cucumis melo HOM05D005417 ORTHO05D002591 9.3e-10 68.6 159 37.7
Gohir.D07G164700 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.8e-08 64.3 111 46.8
Haze_03369 Corylus avellana HOM05D005417 ORTHO05D002591 2.5e-07 60.5 79 45.6
AUR62001135 Chenopodium quinoa HOM05D005417 ORTHO05D002591 9.6e-07 58.5 198 24.2
ClCG09G008640 Citrullus lanatus HOM05D005417 ORTHO05D002591 2.1e-06 57.4 142 38.7


User provided reference genes

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