Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003652g0030 Nicotiana tabacum HOM05D001447 ORTHO05D005923 2.0e-206 722.2 374 100.0
Nitab4.5_0000753g0110 Nicotiana tabacum HOM05D001447 ORTHO05D005923 1.9e-140 503.1 345 79.7
CAN.G625.44 Capsicum annuum HOM05D001447 ORTHO05D005923 1.3e-112 410.6 299 72.6
Solyc02g086250.4 Solanum lycopersicum HOM05D001447 ORTHO05D005923 3.0e-109 399.4 304 70.7
Sopen02g030930 Solanum pennellii HOM05D001447 ORTHO05D005923 1.6e-107 393.7 303 70.6
Peaxi162Scf00394g00910 Petunia axillaris HOM05D001447 ORTHO05D005923 4.6e-78 295.8 282 58.5
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 2.1e-70 270.4 332 51.8
GSVIVG01031554001 Vitis vinifera HOM05D001447 ORTHO05D005923 5.3e-66 255.8 316 49.1
Oeu038401.1 Olea europaea HOM05D001447 ORTHO05D005923 5.5e-63 245.7 307 47.6
CiPaw.13G153600 Carya illinoinensis HOM05D001447 ORTHO05D005923 2.5e-60 236.9 304 46.4
CSS0020855 Camellia sinensis var. sinensis HOM05D001447 ORTHO05D005923 2.8e-59 233.4 334 44.0
Cfa009826 Carpinus fangiana HOM05D001447 ORTHO05D008204 2.8e-59 233.4 321 46.1
Prupe.4G257000 Prunus persica HOM05D001447 ORTHO05D005923 2.8e-59 233.4 313 45.0
TAR369G0010 Trochodendron aralioides HOM05D001447 ORTHO05D005923 3.1e-58 229.9 320 43.8
Cc01_g06480 Coffea canephora HOM05D001447 ORTHO05D005923 4.1e-58 229.6 315 44.4
Dinv36208 Davidia involucrata HOM05D001447 ORTHO05D005923 1.2e-57 228.0 315 46.0
Cpa.g.sc84.6 Carica papaya HOM05D001447 ORTHO05D005923 3.8e-56 223.0 334 42.8
CANSAT54G2333 Cannabis sativa HOM05D001447 ORTHO05D005923 1.4e-55 221.1 328 43.0
Gohir.A09G111500 Gossypium hirsutum HOM05D001447 ORTHO05D005923 1.4e-55 221.1 319 46.1
TWI23G0345 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 1.9e-55 220.7 331 44.4
Manes.09G003800 Manihot esculenta HOM05D001447 ORTHO05D005923 3.2e-55 219.9 315 42.5
Gohir.D09G108100 Gossypium hirsutum HOM05D001447 ORTHO05D005923 4.2e-55 219.5 319 45.8
Gorai.006G125800 Gossypium raimondii HOM05D001447 ORTHO05D005923 4.2e-55 219.5 319 45.8
Manes.06G161200 Manihot esculenta HOM05D001447 ORTHO05D005923 9.4e-55 218.4 315 42.5
TAR623G1061 Trochodendron aralioides HOM05D001447 ORTHO05D005923 1.2e-54 218.0 323 41.8
Nn2g15058 Nelumbo nucifera HOM05D001447 ORTHO05D005923 2.1e-54 217.2 317 40.1
MSTRG.11555 Avicennia marina HOM05D001447 ORTHO05D005923 2.7e-54 216.9 306 40.8
RcHm_v2.0_Chr5g0051191 Rosa chinensis HOM05D001447 ORTHO05D005923 1.0e-53 214.9 319 40.8
Aa31LG8G6860 Aethionema arabicum HOM05D001447 ORTHO05D005923 3.0e-53 213.4 300 43.3
Glyma.18G222500 Glycine max HOM05D001447 ORTHO05D005923 8.8e-53 211.8 308 42.9
CARHR095600 Cardamine hirsuta HOM05D001447 ORTHO05D005923 2.0e-52 210.7 300 43.7
Haze_23187 Corylus avellana HOM05D001447 ORTHO05D005923 7.4e-52 208.8 302 43.4
Migut.O00259 Erythranthe guttata HOM05D001447 ORTHO05D005923 1.3e-51 208.0 302 42.1
TWI14G1124 Tripterygium wilfordii HOM05D001447 ORTHO05D005923 1.3e-51 208.0 334 42.2
Thecc.09G241000 Theobroma cacao HOM05D001447 ORTHO05D005923 1.7e-51 207.6 315 42.2
ClCG02G023020 Citrullus lanatus HOM05D001447 ORTHO05D008204 2.4e-50 203.8 316 41.5
THA.LOC104811411 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 3.1e-50 203.4 305 41.0
PGR119G0225 Punica granatum HOM05D001447 ORTHO05D005923 5.3e-50 202.6 312 42.3
Sp3g18100 Schrenkiella parvula HOM05D001447 ORTHO05D005923 5.3e-50 202.6 300 42.7
Glyma.10G069400 Glycine max HOM05D001447 ORTHO05D005923 1.2e-49 201.4 307 43.0
MELO3C014572.2 Cucumis melo HOM05D001447 ORTHO05D005923 1.5e-49 201.1 310 41.3
Lsat_1_v5_gn_2_28360 Lactuca sativa HOM05D001447 ORTHO05D005923 3.4e-49 199.9 302 39.1
CsaV3_6G039120 Cucumis sativus L. HOM05D001447 ORTHO05D008204 4.5e-49 199.5 307 41.7
Actinidia06934 Actinidia chinensis HOM05D001447 ORTHO05D008204 1.3e-48 198.0 314 38.9
AUR62000166 Chenopodium quinoa HOM05D001447 ORTHO05D005923 2.9e-48 196.8 318 39.0
LjContig00136g0008106 Lotus japonicus HOM05D001447 ORTHO05D005923 3.8e-48 196.4 308 40.6
Gohir.D05G073400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 5.0e-48 196.1 300 42.3
Gorai.009G074300 Gossypium raimondii HOM05D001447 ORTHO05D005923 5.0e-48 196.1 316 43.0
Medtr7g075050 Medicago truncatula HOM05D001447 ORTHO05D005923 5.0e-48 196.1 310 40.0
COL.COLO4_36479 Corchorus olitorius HOM05D001447 ORTHO05D005923 8.5e-48 195.3 278 42.1
Potri.009G049500 Populus trichocarpa HOM05D001447 ORTHO05D005923 8.5e-48 195.3 318 38.4
FvH4_3g28310 Fragaria vesca HOM05D001447 ORTHO05D005923 1.1e-47 194.9 319 39.8
FAN11G3154 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.1e-47 194.9 319 39.8
PSO170G2976 Papaver somniferum HOM05D001447 ORTHO05D005923 1.1e-47 194.9 303 40.6
ECA233G1682 Erigeron canadensis HOM05D001447 ORTHO05D005923 1.4e-47 194.5 314 41.4
MBI13_g04766_MAGBIO Magnolia biondii HOM05D001447 ORTHO05D005923 1.9e-47 194.1 343 37.3
THA.LOC104809267 Tarenaya hassleriana HOM05D001447 ORTHO05D005923 3.2e-47 193.4 308 38.6
Eucgr.J00732 Eucalyptus grandis HOM05D001447 ORTHO05D005923 4.2e-47 193.0 316 39.9
Medtr8g059560 Medicago truncatula HOM05D001447 ORTHO05D005923 7.2e-47 192.2 305 39.7
Duzib168G0657 Durio zibethinus HOM05D001447 ORTHO05D005923 9.4e-47 191.8 293 43.0
Glyma.09G267400 Glycine max HOM05D001447 ORTHO05D005923 9.4e-47 191.8 307 41.0
Lalb_Chr17g0336631 Lupinus albus HOM05D001447 ORTHO05D005923 9.4e-47 191.8 332 38.6
FAN16G0976 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.2e-46 191.4 320 39.1
MD11G1187600 Malus domestica HOM05D001447 ORTHO05D005923 1.6e-46 191.0 303 39.6
Hma1.2p1_1503F.1_g287490 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 2.1e-46 190.7 311 40.2
AL3G33750 Arabidopsis lyrata HOM05D001447 ORTHO05D005923 3.6e-46 189.9 307 40.7
MD03G1170100 Malus domestica HOM05D001447 ORTHO05D005923 3.6e-46 189.9 303 40.3
Thhalv10021184m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 7.9e-46 188.7 324 39.5
PSO384G1304 Papaver somniferum HOM05D001447 ORTHO05D005923 1.0e-45 188.3 304 40.1
Hund21995 Selenicereus undatus HOM05D001447 ORTHO05D005923 1.4e-45 188.0 336 37.2
VMungo1383G2912 Vigna mungo HOM05D001447 ORTHO05D005923 3.9e-45 186.4 301 39.5
AUR62039845 Chenopodium quinoa HOM05D001447 ORTHO05D005923 6.7e-45 185.7 322 37.3
VMungo0540G1247 Vigna mungo HOM05D001447 ORTHO05D003921 6.7e-45 185.7 320 41.9
HanXRQChr14g0441711 Helianthus annuus HOM05D001447 ORTHO05D005923 1.5e-44 184.5 303 38.6
Glyma.13G152406 Glycine max HOM05D001447 ORTHO05D005923 2.0e-44 184.1 308 40.3
Phvul.008G074800 Phaseolus vulgaris HOM05D001447 ORTHO05D005923 2.6e-44 183.7 301 37.9
Rhsim13G0217200 Rhododendron simsii HOM05D001447 ORTHO05D005923 3.3e-44 183.3 345 36.8
arahy.Tifrunner.gnm1.ann1.Q3UL2U Arachis hypogaea HOM05D001447 ORTHO05D005923 4.4e-44 183.0 330 38.2
PSO339G5991 Papaver somniferum HOM05D001447 ORTHO05D005923 5.7e-44 182.6 304 38.8
SalBow4G0828 Salvia bowleyana HOM05D001447 ORTHO05D005923 5.7e-44 182.6 388 33.2
Sc09g0000900 Simmondsia chinensis HOM05D001447 ORTHO05D005923 1.3e-43 181.4 316 37.7
Atru.chr3.2630 Acer truncatum HOM05D001447 ORTHO05D005923 1.7e-43 181.0 354 35.6
Carub.0003s1999 Capsella rubella HOM05D001447 ORTHO05D005923 6.3e-43 179.1 300 39.0
Ah.06g193790 Amaranthus hybridus HOM05D001447 ORTHO05D005923 8.2e-43 178.7 311 37.3
TPR.G26927 Trifolium pratense HOM05D001447 ORTHO05D005923 8.2e-43 178.7 312 37.2
FAN21G0933 Fragaria x ananassa HOM05D001447 ORTHO05D005923 1.4e-42 177.9 326 37.4
arahy.Tifrunner.gnm1.ann1.QJKL08 Arachis hypogaea HOM05D001447 ORTHO05D005923 1.8e-42 177.6 330 37.6
ECA234G3051 Erigeron canadensis HOM05D001447 ORTHO05D005923 3.1e-42 176.8 298 39.6
C05p44410 Brassica napus HOM05D001447 ORTHO05D005923 2.6e-41 173.7 302 39.1
BolC5t33164H Brassica oleracea HOM05D001447 ORTHO05D005923 2.6e-41 173.7 302 39.1
Hma1.2p1_1116F.1_g258880 Hydrangea macrophylla HOM05D001447 ORTHO05D005923 2.6e-41 173.7 299 38.1
Actinidia16355 Actinidia chinensis HOM05D001447 ORTHO05D005923 7.7e-41 172.2 376 32.7
Gohir.A05G070400 Gossypium hirsutum HOM05D001447 ORTHO05D005923 1.3e-40 171.4 317 41.0
BcaC05g28363 Brassica carinata HOM05D001447 ORTHO05D005923 3.8e-40 169.9 302 38.4
BraA05t21783Z Brassica rapa HOM05D001447 ORTHO05D005923 1.1e-39 168.3 302 38.4
vmacro10456 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 1.9e-39 167.5 352 34.1
FAN25G1867 Fragaria x ananassa HOM05D001447 ORTHO05D005923 2.5e-39 167.2 320 35.9
Lalb_Chr20g0108071 Lupinus albus HOM05D001447 ORTHO05D005923 2.7e-38 163.7 340 35.0
BcaB06g26078 Brassica carinata HOM05D001447 ORTHO05D005923 8.8e-37 158.7 318 36.5
vmacro04118 Vaccinium macrocarpon HOM05D001447 ORTHO05D005923 1.1e-36 158.3 409 31.1
EL10Ac4g10184 Beta vulgaris HOM05D001447 ORTHO05D005923 2.0e-36 157.5 292 36.0
A05p29010 Brassica napus HOM05D001447 ORTHO05D005923 3.3e-36 156.8 325 36.0
AT3G20070 Arabidopsis thaliana HOM05D001447 ORTHO05D005923 3.1e-34 150.2 300 37.0
PSO210G7517 Papaver somniferum HOM05D001447 ORTHO05D005923 9.1e-34 148.7 303 36.3
Ciclev10006845m.g Citrus clementina HOM05D001447 ORTHO05D005923 1.6e-33 147.9 300 37.3
Psat3g114240 Pisum sativum HOM05D001447 ORTHO05D005923 1.3e-32 144.8 316 35.1
Sed0027916 Sechium edule HOM05D001447 ORTHO05D005923 1.5e-31 141.4 310 34.5
Aqoxy2G00276 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 1.9e-31 141.0 326 33.4
TAR623G1057 Trochodendron aralioides HOM05D001447 ORTHO05D005923 7.2e-31 139.0 223 39.0
ATR0681G241 Amborella trichopoda HOM05D001447 ORTHO05D005923 1.2e-30 138.3 328 34.1
DCAR_002089 Daucus carota HOM05D001447 ORTHO05D005923 4.4e-28 129.8 219 37.9
Lj5A793G14 Lonicera japonica HOM05D001447 ORTHO05D005923 4.8e-27 126.3 209 37.8
Lj2A623T26 Lonicera japonica HOM05D001447 ORTHO05D005923 1.1e-26 125.2 210 37.6
TAR623G0977 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.4e-26 124.0 220 38.6
HPP92_015725 Vanilla planifolia HOM05D001447 ORTHO05D005923 5.3e-26 122.9 300 31.0
HanXRQChr04g0117031 Helianthus annuus HOM05D001447 ORTHO05D005923 1.2e-25 121.7 245 36.7
QL01p018064 Quercus lobata HOM05D001447 ORTHO05D005923 1.0e-24 118.6 209 37.8
Ca_07826_v3 Cicer arietinum L. HOM05D001447 ORTHO05D005923 1.6e-22 111.3 233 35.2
SGA_v2.0_scaffold25G10748 Striga asiatica HOM05D001447 ORTHO05D005923 3.6e-22 110.2 204 33.3
Aqoxy2G00275 Aquilegia oxysepala HOM05D001447 ORTHO05D005923 2.3e-21 107.5 315 30.8
unitig_8.g3773 Utricularia gibba HOM05D001447 ORTHO05D005923 9.8e-20 102.1 105 46.7
SEGI_06958 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 1.8e-18 97.8 350 26.0
Os06g0245600 Oryza sativa ssp. japonica HOM05D001447 ORTHO05D005923 1.2e-17 95.1 244 28.7
TAR623G1702 Trochodendron aralioides HOM05D001447 ORTHO05D005923 3.5e-17 93.6 247 31.6
TAR622G0649 Trochodendron aralioides HOM05D000050 ORTHO05D000654 4.2e-15 86.7 297 26.6
CDE02G0596 Ceratophyllum demersum HOM05D001447 ORTHO05D005923 1.2e-14 85.1 140 32.9
BcaB01g01441 Brassica carinata HOM05D001447 ORTHO05D005923 2.8e-14 84.0 220 31.8
BolC4t26880H Brassica oleracea HOM05D001447 ORTHO05D005923 1.0e-13 82.0 239 29.7
Zm00001eb128570 Zea mays HOM05D001447 ORTHO05D005923 2.3e-13 80.9 336 30.1
QL01p018054 Quercus lobata HOM05D001447 ORTHO05D005923 3.0e-13 80.5 75 58.7
SHI27451 Sapria himalayana HOM05D001447 ORTHO05D000654 5.2e-13 79.7 220 29.5
Aa31LG7G13510 Aethionema arabicum HOM05D001447 ORTHO05D005923 1.5e-12 78.2 142 37.3
BcaB02g07197 Brassica carinata HOM05D001447 ORTHO05D005923 1.3e-11 75.1 126 38.9
VMungo1383G3216 Vigna mungo HOM05D001447 ORTHO05D010195 4.9e-11 73.2 129 36.4
SEGI_16617 Sequoiadendron giganteum HOM05D001447 ORTHO05D005923 8.3e-11 72.4 346 24.6
TAR623G0653 Trochodendron aralioides HOM05D001447 ORTHO05D005923 4.1e-10 70.1 55 67.3
VMungo1383G1695 Vigna mungo HOM05D001447 ORTHO05D005923 5.4e-10 69.7 106 39.6
Mapoly0019s0119 Marchantia polymorpha HOM05D001447 ORTHO05D005923 4.5e-09 66.6 323 26.3
BcaB06g26464 Brassica carinata HOM05D001447 ORTHO05D005923 1.0e-08 65.5 175 30.9
Thhalv10023995m.g Eutrema salsugineum HOM05D001447 ORTHO05D005923 2.3e-08 64.3 257 25.3
TAR623G0319 Trochodendron aralioides HOM05D001447 ORTHO05D005923 2.3e-08 64.3 203 29.1
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 3.3e-07 60.5 97 32.0
Solyc02g086227.1 Solanum lycopersicum HOM05D001447 ORTHO05D005923 5.6e-07 59.7 84 47.6


User provided reference genes

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