Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003649g0040 Nicotiana tabacum HOM05D003475 ORTHO05D004155 8.1e-185 650.2 314 100.0
Nitab4.5_0004930g0010 Nicotiana tabacum HOM05D003475 ORTHO05D004155 1.6e-156 556.2 328 86.3
Peaxi162Scf00929g00519 Petunia axillaris HOM05D003475 ORTHO05D004155 9.0e-152 540.4 307 85.0
Sopen04g019770 Solanum pennellii HOM05D003475 ORTHO05D004155 1.0e-147 526.9 324 81.5
Solyc04g049630.3 Solanum lycopersicum HOM05D003475 ORTHO05D004155 1.9e-146 522.7 324 80.9
CAN.G57.16 Capsicum annuum HOM05D003475 ORTHO05D004155 1.7e-142 509.6 369 71.3
Sc02g0006850 Simmondsia chinensis HOM05D003475 ORTHO05D004155 7.9e-132 474.2 330 70.9
QL02p006064 Quercus lobata HOM05D003475 ORTHO05D004155 1.0e-131 473.8 322 71.4
TWI56G0590 Tripterygium wilfordii HOM05D003475 ORTHO05D004155 1.0e-131 473.8 323 72.8
Dinv35989 Davidia involucrata HOM05D004345 ORTHO05D004155 2.0e-130 469.5 323 71.8
GSVIVG01009564001 Vitis vinifera HOM05D003475 ORTHO05D004155 2.6e-130 469.2 333 70.6
Prupe.1G441500 Prunus persica HOM05D003475 ORTHO05D004155 1.7e-129 466.5 324 70.4
Manes.18G034500 Manihot esculenta HOM05D003475 ORTHO05D004155 4.8e-129 464.9 323 71.2
Potri.002G128700 Populus trichocarpa HOM05D003475 ORTHO05D004155 8.2e-129 464.2 325 70.8
SGA_v2.0_scaffold217G42435 Striga asiatica HOM05D003475 ORTHO05D004155 8.2e-129 464.2 321 70.4
Thecc.08G013900 Theobroma cacao HOM05D003475 ORTHO05D004155 8.2e-129 464.2 325 70.8
arahy.Tifrunner.gnm1.ann1.W6GX7N Arachis hypogaea HOM05D003475 ORTHO05D004155 1.1e-128 463.8 322 71.7
MD15G1087800 Malus domestica HOM05D003475 ORTHO05D004155 3.1e-128 462.2 324 69.8
Actinidia15262 Actinidia chinensis HOM05D003475 ORTHO05D004155 5.3e-128 461.5 324 71.0
MSTRG.25109 Avicennia marina HOM05D003475 ORTHO05D004155 5.3e-128 461.5 321 71.7
Hma1.2p1_0260F.1_g104710 Hydrangea macrophylla HOM05D003475 ORTHO05D004155 5.3e-128 461.5 320 71.6
CSS0007643 Camellia sinensis var. sinensis HOM05D003475 ORTHO05D004155 9.1e-128 460.7 324 70.4
CiPaw.15G063700 Carya illinoinensis HOM05D003475 ORTHO05D004155 9.1e-128 460.7 321 70.4
Migut.C00608 Erythranthe guttata HOM05D003475 ORTHO05D004155 1.5e-127 459.9 324 69.8
RcHm_v2.0_Chr6g0307051 Rosa chinensis HOM05D003475 ORTHO05D004155 3.5e-127 458.8 321 70.1
Ciclev10003676m.g Citrus clementina HOM05D003475 ORTHO05D004155 5.9e-127 458.0 321 69.8
Atru.chr13.624 Acer truncatum HOM05D003475 ORTHO05D004155 7.7e-127 457.6 321 70.7
Cc10_g03890 Coffea canephora HOM05D003475 ORTHO05D004155 7.7e-127 457.6 321 71.3
TWI56G1470 Tripterygium wilfordii HOM05D003475 ORTHO05D004155 7.7e-127 457.6 323 69.0
COL.COLO4_26452 Corchorus olitorius HOM05D003475 ORTHO05D004155 1.0e-126 457.2 325 69.8
MD08G1107200 Malus domestica HOM05D003475 ORTHO05D004155 1.0e-126 457.2 324 68.5
PGR083G1228 Punica granatum HOM05D003475 ORTHO05D004155 1.0e-126 457.2 335 67.8
Glyma.08G315400 Glycine max HOM05D003475 ORTHO05D004155 1.7e-126 456.4 321 69.5
Phvul.006G042600 Phaseolus vulgaris HOM05D003475 ORTHO05D004155 2.9e-126 455.7 324 69.1
SalBow7G2172 Salvia bowleyana HOM05D003475 ORTHO05D004155 2.9e-126 455.7 321 69.5
Gohir.D06G014300 Gossypium hirsutum HOM05D003475 ORTHO05D004155 5.0e-126 454.9 325 69.8
Gorai.010G016900 Gossypium raimondii HOM05D003475 ORTHO05D004155 5.0e-126 454.9 325 69.8
Duzib116G0360 Durio zibethinus HOM05D003475 ORTHO05D004155 6.5e-126 454.5 324 70.4
FAN27G1383 Fragaria x ananassa HOM05D003475 ORTHO05D004155 6.5e-126 454.5 324 68.5
Eucgr.F00026 Eucalyptus grandis HOM05D003475 ORTHO05D004155 8.5e-126 454.1 335 67.5
FAN20G0705 Fragaria x ananassa HOM05D003475 ORTHO05D004155 1.1e-125 453.8 324 68.5
GSVIVG01009565001 Vitis vinifera HOM05D003475 ORTHO05D004155 1.1e-125 453.8 333 67.9
Oeu032239.1 Olea europaea HOM05D003475 ORTHO05D004155 1.5e-125 453.4 321 70.1
TPR.G16593 Trifolium pratense HOM05D003475 ORTHO05D004155 1.9e-125 453.0 320 69.7
ECA248G1217 Erigeron canadensis HOM05D003475 ORTHO05D004155 3.2e-125 452.2 324 68.5
VMungo0540G2323 Vigna mungo HOM05D003475 ORTHO05D004155 3.2e-125 452.2 323 70.0
AUR62040061 Chenopodium quinoa HOM05D003475 ORTHO05D004155 7.2e-125 451.1 327 70.0
EL10Ac1g01808 Beta vulgaris HOM05D003475 ORTHO05D004155 9.4e-125 450.7 318 69.8
Ca_05516_v3 Cicer arietinum L. HOM05D003475 ORTHO05D004155 9.4e-125 450.7 321 69.5
Cfa018505 Carpinus fangiana HOM05D003475 ORTHO05D004155 1.2e-124 450.3 308 71.1
TAR381G1600 Trochodendron aralioides HOM05D003475 ORTHO05D004155 1.2e-124 450.3 325 69.2
Ah.11g043410 Amaranthus hybridus HOM05D003475 ORTHO05D004155 1.6e-124 449.9 332 67.2
Gohir.A06G016100 Gossypium hirsutum HOM05D003475 ORTHO05D004155 1.6e-124 449.9 325 69.2
Haze_17571 Corylus avellana HOM05D003475 ORTHO05D004155 2.1e-124 449.5 315 70.2
FAN15G0079 Fragaria x ananassa HOM05D003475 ORTHO05D004155 6.1e-124 448.0 324 68.2
Medtr3g051310 Medicago truncatula HOM05D003475 ORTHO05D004155 6.1e-124 448.0 321 68.8
Lj6g0027326 Lotus japonicus HOM05D003475 ORTHO05D004155 8.0e-124 447.6 321 68.2
Sed0005929 Sechium edule HOM05D003475 ORTHO05D004155 1.0e-123 447.2 323 68.7
AUR62022463 Chenopodium quinoa HOM05D003475 ORTHO05D004155 3.0e-123 445.7 327 69.4
MELO3C016731.2 Cucumis melo HOM05D003475 ORTHO05D004155 3.0e-123 445.7 321 68.5
CsaV3_4G034080 Cucumis sativus L. HOM05D003475 ORTHO05D004155 1.1e-122 443.7 321 68.5
CANSAT25G2609 Cannabis sativa HOM05D003475 ORTHO05D004155 1.5e-122 443.4 321 69.5
DCAR_008786 Daucus carota HOM05D003475 ORTHO05D004155 1.5e-122 443.4 323 69.3
Zm00001eb373080 Zea mays HOM05D003475 ORTHO05D004155 1.5e-122 443.4 320 69.4
Eucgr.L02208 Eucalyptus grandis HOM05D003475 ORTHO05D004155 2.0e-122 443.0 321 68.2
Lalb_Chr18g0049301 Lupinus albus HOM05D003475 ORTHO05D004155 2.0e-122 443.0 320 68.4
Glyma.18G098400 Glycine max HOM05D003475 ORTHO05D004155 2.6e-122 442.6 320 68.4
PSO675G3306 Papaver somniferum HOM05D003475 ORTHO05D004155 4.4e-122 441.8 321 67.6
Os06g0215300 Oryza sativa ssp. japonica HOM05D003475 ORTHO05D004155 1.3e-121 440.3 320 69.7
CSS0002070 Camellia sinensis var. sinensis HOM05D003475 ORTHO05D004155 1.7e-121 439.9 321 66.7
CSS0021204 Camellia sinensis var. sinensis HOM05D003475 ORTHO05D004155 1.7e-121 439.9 321 66.4
MBI02_g21206_MAGBIO Magnolia biondii HOM05D003475 ORTHO05D004155 1.7e-121 439.9 321 67.0
THA.LOC104821889 Tarenaya hassleriana HOM05D003475 ORTHO05D004155 2.8e-121 439.1 328 66.5
FvH4_2g34941 Fragaria vesca HOM05D003475 ORTHO05D004155 3.7e-121 438.7 320 67.8
Cc10_g03900 Coffea canephora HOM05D003475 ORTHO05D004155 6.3e-121 438.0 324 67.3
Eucgr.F00028 Eucalyptus grandis HOM05D003475 ORTHO05D004155 8.2e-121 437.6 335 65.7
PSO541G5638 Papaver somniferum HOM05D003475 ORTHO05D004155 1.1e-120 437.2 321 67.3
arahy.Tifrunner.gnm1.ann1.VT20D2 Arachis hypogaea HOM05D003475 ORTHO05D004155 1.8e-120 436.4 307 71.3
Eucgr.F00027 Eucalyptus grandis HOM05D003475 ORTHO05D004155 3.1e-120 435.6 335 65.7
Psat5g180320 Pisum sativum HOM05D003475 ORTHO05D004155 4.1e-120 435.3 324 67.9
Aqoxy6G01420 Aquilegia oxysepala HOM05D003475 ORTHO05D004155 1.2e-119 433.7 321 65.7
Hma1.2p1_1543F.1_g289760 Hydrangea macrophylla HOM05D003475 ORTHO05D004155 2.0e-119 433.0 322 66.1
FvH4_2g34950 Fragaria vesca HOM05D003475 ORTHO05D004155 5.9e-119 431.4 324 65.7
VMungo0540G0248 Vigna mungo HOM05D003475 ORTHO05D004155 5.9e-119 431.4 320 66.9
AT5G36210 Arabidopsis thaliana HOM05D003475 ORTHO05D004155 7.7e-119 431.0 320 66.2
A08p00170 Brassica napus HOM05D003475 ORTHO05D004155 7.7e-119 431.0 320 66.2
BraA08t32073Z Brassica rapa HOM05D003475 ORTHO05D004155 7.7e-119 431.0 320 66.2
Phvul.006G042700 Phaseolus vulgaris HOM05D003475 ORTHO05D004155 1.0e-118 430.6 320 66.2
vmacro21559 Vaccinium macrocarpon HOM05D003475 ORTHO05D004155 1.7e-118 429.9 355 63.4
Actinidia27942 Actinidia chinensis HOM05D003475 ORTHO05D004155 2.2e-118 429.5 321 66.7
C03p93340 Brassica napus HOM05D003475 ORTHO05D004155 3.8e-118 428.7 320 65.9
BolC3t21632H Brassica oleracea HOM05D003475 ORTHO05D004155 3.8e-118 428.7 320 65.9
PSO675G3178 Papaver somniferum HOM05D003475 ORTHO05D004155 3.8e-118 428.7 323 65.6
CARHR216560 Cardamine hirsuta HOM05D003475 ORTHO05D004155 5.0e-118 428.3 320 65.9
FAN20G3001 Fragaria x ananassa HOM05D003475 ORTHO05D004155 6.5e-118 427.9 351 61.5
ClCG05G019590 Citrullus lanatus HOM05D003475 ORTHO05D004155 8.5e-118 427.6 306 69.6
HanXRQChr13g0399111 Helianthus annuus HOM05D003475 ORTHO05D004155 8.5e-118 427.6 321 64.8
CDE06G0513 Ceratophyllum demersum HOM05D003475 ORTHO05D004155 1.1e-117 427.2 321 65.7
Sp7g05960 Schrenkiella parvula HOM05D003475 ORTHO05D004155 1.1e-117 427.2 320 66.6
Carub.0007s3188 Capsella rubella HOM05D003475 ORTHO05D004155 1.9e-117 426.4 320 65.6
Rhsim06G0046300 Rhododendron simsii HOM05D003475 ORTHO05D004155 1.9e-117 426.4 379 60.2
AL7G45140 Arabidopsis lyrata HOM05D003475 ORTHO05D004155 3.2e-117 425.6 320 65.3
Lsat_1_v5_gn_6_33061 Lactuca sativa HOM05D003475 ORTHO05D004155 1.2e-116 423.7 312 67.9
Solyc10g050840.3 Solanum lycopersicum HOM05D003475 ORTHO05D004155 2.1e-116 422.9 321 65.7
Sopen10g022400 Solanum pennellii HOM05D003475 ORTHO05D004155 2.1e-116 422.9 321 65.7
Thhalv10003712m.g Eutrema salsugineum HOM05D003475 ORTHO05D004155 8.0e-116 421.0 320 64.7
Lsat_1_v5_gn_1_54780 Lactuca sativa HOM05D003475 ORTHO05D004155 8.0e-116 421.0 322 65.8
Os06g0215400 Oryza sativa ssp. japonica HOM05D003475 ORTHO05D004155 1.8e-115 419.9 334 64.4
SHI08311 Sapria himalayana HOM05D003475 ORTHO05D004155 2.3e-115 419.5 321 65.7
HPP92_004258 Vanilla planifolia HOM05D003475 ORTHO05D004155 6.8e-115 417.9 333 64.3
Aa31LG9G17910 Aethionema arabicum HOM05D003475 ORTHO05D004155 1.5e-114 416.8 359 59.6
PGSC0003DMG400008244 Solanum tuberosum HOM05D003475 ORTHO05D004155 2.6e-114 416.0 321 65.1
ATR0097G003 Amborella trichopoda HOM05D003475 ORTHO05D004155 7.5e-114 414.5 322 63.4
MELO3C016729.2 Cucumis melo HOM05D003475 ORTHO05D004155 2.2e-113 412.9 311 67.2
Peaxi162Scf00003g01723 Petunia axillaris HOM05D003475 ORTHO05D004155 6.3e-113 411.4 339 62.5
Sed0014453 Sechium edule HOM05D003475 ORTHO05D004155 1.4e-112 410.2 311 66.2
CsaV3_4G034070 Cucumis sativus L. HOM05D003475 ORTHO05D004155 1.8e-112 409.8 311 66.6
FAN15G1851 Fragaria x ananassa HOM05D003475 ORTHO05D004155 1.8e-112 409.8 342 61.1
vmacro19485 Vaccinium macrocarpon HOM05D003475 ORTHO05D004155 5.4e-112 408.3 354 59.0
Lj9A359T75 Lonicera japonica HOM05D003475 ORTHO05D004155 9.1e-112 407.5 361 59.0
THA.LOC104823807 Tarenaya hassleriana HOM05D003475 ORTHO05D004155 9.1e-112 407.5 320 64.1
Prupe.1G441400 Prunus persica HOM05D003475 ORTHO05D004155 1.0e-110 404.1 309 65.4
Hund26615 Selenicereus undatus HOM05D003475 ORTHO05D004155 3.8e-110 402.1 330 62.4
PSO675G9051 Papaver somniferum HOM05D003475 ORTHO05D004155 3.2e-109 399.1 324 63.3
Nitab4.5_0000876g0160 Nicotiana tabacum HOM05D003475 ORTHO05D004155 6.1e-108 394.8 330 61.5
ECA233G1971 Erigeron canadensis HOM05D003475 ORTHO05D004155 1.8e-107 393.3 324 61.4
Nitab4.5_0002673g0070 Nicotiana tabacum HOM05D003475 ORTHO05D004155 3.4e-106 389.0 330 61.2
CAN.G1288.14 Capsicum annuum HOM05D003475 ORTHO05D004155 7.5e-106 387.9 318 61.6
Eucgr.L03025 Eucalyptus grandis HOM05D003475 ORTHO05D004155 7.5e-106 387.9 319 63.0
DCAR_003620 Daucus carota HOM05D003475 ORTHO05D004155 1.7e-105 386.7 335 59.4
Sabra02G0100800 Salix brachista HOM05D003475 ORTHO05D004155 1.1e-104 384.0 346 57.8
Eucgr.F00025 Eucalyptus grandis HOM05D003475 ORTHO05D004155 8.9e-99 364.4 321 60.1
Lj4C50T5 Lonicera japonica HOM05D003475 ORTHO05D004155 6.4e-97 358.2 260 68.8
FAN27G2115 Fragaria x ananassa HOM05D003475 ORTHO05D004155 4.0e-91 339.0 282 61.7
SMO361G0429 Selaginella moellendorffii HOM05D003475 ORTHO05D004155 4.0e-91 339.0 292 57.9
HanXRQChr11g0349621 Helianthus annuus HOM05D003475 ORTHO05D004155 1.7e-89 333.6 264 63.3
Mapoly0002s0297 Marchantia polymorpha HOM05D003475 ORTHO05D004155 6.4e-89 331.6 324 52.2
Pp3c1_10400 Physcomitrium patens HOM05D003475 ORTHO05D004155 4.1e-88 328.9 327 51.7
Cpa.g.c26337.1 Carica papaya HOM05D003475 ORTHO05D004155 7.8e-87 324.7 257 64.2
arahy.Tifrunner.gnm1.ann1.DEGU9R Arachis hypogaea HOM05D003475 ORTHO05D004155 1.2e-82 310.8 287 57.5
Nitab4.5_0003438g0010 Nicotiana tabacum HOM05D003475 ORTHO05D004155 2.6e-82 309.7 203 80.3
Dinv42129 Davidia involucrata HOM05D003475 ORTHO05D004155 1.4e-75 287.3 218 64.7
CBR_g23970 Chara braunii HOM05D003475 ORTHO05D004155 2.9e-73 279.6 352 47.4
HPP92_004236 Vanilla planifolia HOM05D003475 ORTHO05D004155 3.7e-73 279.3 236 64.0
Zm00001eb373040 Zea mays HOM05D003475 ORTHO05D004155 1.1e-72 277.7 218 63.3
MD08G1107000 Malus domestica HOM05D003475 ORTHO05D004155 6.0e-63 245.4 165 74.5
PRCOL_00005577 Prasinoderma coloniale HOM05D003475 ORTHO05D004155 3.1e-59 233.0 263 49.0
Sc08g0000070 Simmondsia chinensis HOM05D003475 ORTHO05D004155 9.0e-59 231.5 186 60.2
Cre10.g423300 Chlamydomonas reinhardtii HOM05D003475 ORTHO05D004155 9.9e-58 228.0 341 40.5
arahy.Tifrunner.gnm1.ann1.HN34MD Arachis hypogaea HOM05D003475 ORTHO05D004155 1.2e-55 221.1 198 58.1
Nn5g30184 Nelumbo nucifera HOM05D003475 ORTHO05D004155 1.2e-55 221.1 145 69.0
ATR0097G016 Amborella trichopoda HOM05D003475 ORTHO05D004155 6.0e-55 218.8 221 51.6
Nitab4.5_0028870g0010 Nicotiana tabacum HOM05D003475 ORTHO05D004155 3.9e-54 216.1 109 93.6
Aqoxy6G01418 Aquilegia oxysepala HOM05D003475 ORTHO05D004155 2.6e-50 203.4 142 66.9
Zm00001eb260330 Zea mays HOM05D003475 ORTHO05D004155 4.5e-42 176.0 127 65.4
arahy.Tifrunner.gnm1.ann1.HRI1KU Arachis hypogaea HOM05D003475 ORTHO05D004155 3.2e-40 169.9 128 68.0
SEGI_16824 Sequoiadendron giganteum HOM05D003475 ORTHO05D004155 3.7e-36 156.4 126 59.5
HanXRQChr11g0349761 Helianthus annuus HOM05D003475 ORTHO05D004155 1.3e-30 137.9 72 90.3
Lj4A50T39 Lonicera japonica HOM05D003475 ORTHO05D004155 1.8e-27 127.5 84 76.2
SEGI_23875 Sequoiadendron giganteum HOM05D003475 ORTHO05D004155 6.9e-27 125.6 76 78.9
SEGI_38131 Sequoiadendron giganteum HOM05D003475 ORTHO05D004155 1.2e-26 124.8 73 80.8
HanXRQChr11g0349531 Helianthus annuus HOM05D003475 ORTHO05D004155 1.9e-24 117.5 72 79.2
SEGI_00299 Sequoiadendron giganteum HOM05D003475 ORTHO05D004155 2.5e-24 117.1 125 52.0
HanXRQChr12g0382841 Helianthus annuus HOM05D003475 ORTHO05D000562 1.1e-21 108.2 67 79.1
FvH4_1g22470 Fragaria vesca HOM05D003475 ORTHO05D035452 8.2e-20 102.1 129 44.2
Sc08g0000060 Simmondsia chinensis HOM05D003475 ORTHO05D004155 4.5e-18 96.3 89 57.3
GSVIVG01038759001 Vitis vinifera HOM05D003475 ORTHO05D004155 3.2e-16 90.1 73 64.4
MD08G1107100 Malus domestica HOM05D003475 ORTHO05D004155 7.9e-15 85.5 72 48.6
Pp3c20_7850 Physcomitrium patens HOM05D003475 ORTHO05D026663 9.7e-13 78.6 189 28.0
SMO361G0168 Selaginella moellendorffii HOM05D003475 ORTHO05D004155 2.2e-12 77.4 75 52.0
AagrBONN_evm.TU.Sc2ySwM_228.3095 Anthoceros agrestis HOM05D003475 ORTHO05D026663 1.4e-11 74.7 191 29.3
SMO226G0004 Selaginella moellendorffii HOM05D003475 ORTHO05D004155 1.4e-11 74.7 72 54.2
Mapoly0175s0001 Marchantia polymorpha HOM05D003475 ORTHO05D026663 3.5e-10 70.1 189 27.5
MD15G1087700 Malus domestica HOM05D003475 ORTHO05D004155 5.2e-06 56.2 34 73.5
MD16G1205600 Malus domestica HOM05D003117 ORTHO05D003612 8.8e-06 55.5 214 22.9


User provided reference genes

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