Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003642g0020 Nicotiana tabacum HOM05D007842 ORTHO05D009661 1.5e-89 332.8 162 100.0
Peaxi162Scf00380g00818 Petunia axillaris HOM05D007842 ORTHO05D009661 2.6e-38 162.5 106 77.4
Solyc05g009650.4 Solanum lycopersicum HOM05D007842 ORTHO05D009661 5.1e-34 148.3 107 69.2
Sopen05g005460 Solanum pennellii HOM05D007842 ORTHO05D009661 2.6e-33 146.0 98 72.4
Hma1.2p1_0030F.1_g018270 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 2.2e-13 79.7 110 43.6
SGA_v2.0_scaffold124G33571 Striga asiatica HOM05D007842 ORTHO05D009661 2.9e-13 79.3 95 44.2
Actinidia14866 Actinidia chinensis HOM05D007842 ORTHO05D009661 1.2e-11 73.9 99 45.5
Oeu004600.1 Olea europaea HOM05D007842 ORTHO05D009661 2.1e-11 73.2 104 43.3
Thecc.02G358800 Theobroma cacao HOM05D007842 ORTHO05D009661 4.7e-11 72.0 117 39.3
QL01p044511 Quercus lobata HOM05D007842 ORTHO05D009661 6.1e-11 71.6 114 39.5
TWI31G1443 Tripterygium wilfordii HOM05D007842 ORTHO05D009661 6.1e-11 71.6 116 38.8
COL.COLO4_07888 Corchorus olitorius HOM05D007842 ORTHO05D009661 3.0e-10 69.3 107 39.3
MSTRG.13511 Avicennia marina HOM05D007842 ORTHO05D009661 5.2e-10 68.6 112 39.3
Hma1.2p1_0030F.1_g018290 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 5.2e-10 68.6 94 43.6
CiPaw.04G057000 Carya illinoinensis HOM05D007842 ORTHO05D009661 6.8e-10 68.2 107 39.3
Actinidia16632 Actinidia chinensis HOM05D007842 ORTHO05D009661 8.8e-10 67.8 99 42.4
Rhsim09G0110600 Rhododendron simsii HOM05D007842 ORTHO05D009661 2.6e-09 66.2 113 39.8
Cfa007650 Carpinus fangiana HOM05D007842 ORTHO05D009661 4.4e-09 65.5 94 38.3
SalBow8G3786 Salvia bowleyana HOM05D007842 ORTHO05D009661 5.7e-09 65.1 101 39.6
Potri.010G127900 Populus trichocarpa HOM05D007842 ORTHO05D009661 1.3e-08 63.9 117 35.9
SalBow8G5078 Salvia bowleyana HOM05D007842 ORTHO05D009661 1.3e-08 63.9 101 39.6
Migut.L01087 Erythranthe guttata HOM05D007842 ORTHO05D009661 1.7e-08 63.5 96 37.5
MSTRG.7679 Avicennia marina HOM05D007842 ORTHO05D009661 2.2e-08 63.2 105 41.9
Dinv21114 Davidia involucrata HOM05D007842 ORTHO05D009661 2.2e-08 63.2 99 40.4
Manes.06G070800 Manihot esculenta HOM05D007842 ORTHO05D009661 3.7e-08 62.4 115 36.5
Sabra10G0097200 Salix brachista HOM05D007842 ORTHO05D009661 3.7e-08 62.4 116 35.3
Glyma.10G276000 Glycine max HOM05D007842 ORTHO05D009661 1.1e-07 60.8 105 36.2
Medtr1g111300 Medicago truncatula HOM05D007842 ORTHO05D009661 1.1e-07 60.8 113 32.7
Gohir.A12G169100 Gossypium hirsutum HOM05D007842 ORTHO05D009661 2.4e-07 59.7 94 37.2
Actinidia04615 Actinidia chinensis HOM05D007842 ORTHO05D009661 3.1e-07 59.3 104 40.4
Actinidia38383 Actinidia chinensis HOM05D007842 ORTHO05D009661 3.1e-07 59.3 101 41.6
Lj2g0000320 Lotus japonicus HOM05D007842 ORTHO05D009661 4.1e-07 58.9 104 35.6
Potri.009G097500 Populus trichocarpa HOM05D007842 ORTHO05D009661 7.0e-07 58.2 97 36.1
DCAR_007231 Daucus carota HOM05D007842 ORTHO05D009661 9.2e-07 57.8 92 35.9
Oeu041893.1 Olea europaea HOM05D007842 ORTHO05D009661 1.2e-06 57.4 105 39.0
DCAR_023676 Daucus carota HOM05D007842 ORTHO05D009661 1.6e-06 57.0 94 39.4
VMungo0720G1629 Vigna mungo HOM05D007842 ORTHO05D009661 1.6e-06 57.0 109 34.9
Gohir.D12G172400 Gossypium hirsutum HOM05D007842 ORTHO05D009661 2.0e-06 56.6 95 36.8
Manes.14G099200 Manihot esculenta HOM05D007842 ORTHO05D009661 2.0e-06 56.6 101 37.6
CiPaw.03G089900 Carya illinoinensis HOM05D007842 ORTHO05D009661 4.5e-06 55.5 120 31.7
Glyma.20G113700 Glycine max HOM05D007842 ORTHO05D009661 4.5e-06 55.5 99 34.3
Lsat_1_v5_gn_4_18840 Lactuca sativa HOM05D007842 ORTHO05D009661 5.9e-06 55.1 92 39.1


User provided reference genes

Program Settings