Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003634g0020 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.2e-75 287.0 210 100.0
CAN.G1230.3 Capsicum annuum HOM05D007100 ORTHO05D008958 9.6e-65 250.8 214 84.1
PGSC0003DMG400020466 Solanum tuberosum HOM05D007100 ORTHO05D008958 1.5e-62 243.4 214 82.2
Sopen06g024470 Solanum pennellii HOM05D007100 ORTHO05D008958 2.6e-62 242.7 214 83.6
Solyc06g066000.3 Solanum lycopersicum HOM05D007100 ORTHO05D008958 4.4e-62 241.9 214 82.7
Sopen06g024480 Solanum pennellii HOM05D007100 ORTHO05D008958 4.4e-62 241.9 214 82.7
PGSC0003DMG400020484 Solanum tuberosum HOM05D007100 ORTHO05D008958 4.4e-62 241.9 214 82.7
Solyc06g065990.1 Solanum lycopersicum HOM05D007100 ORTHO05D008958 1.1e-57 227.3 167 80.2
Cc08_g00530 Coffea canephora HOM05D007100 ORTHO05D008958 1.3e-50 203.8 213 72.8
Cpa.g.sc217.8 Carica papaya HOM05D007100 ORTHO05D008958 1.6e-48 196.8 212 70.8
Potri.018G026500 Populus trichocarpa HOM05D007100 ORTHO05D008958 1.6e-48 196.8 212 72.2
Nitab4.5_0000109g0380 Nicotiana tabacum HOM05D007100 ORTHO05D008958 2.1e-48 196.4 149 96.6
Potri.006G255600 Populus trichocarpa HOM05D007100 ORTHO05D008958 2.1e-48 196.4 212 70.3
Oeu057296.2 Olea europaea HOM05D007100 ORTHO05D008958 8.1e-48 194.5 221 71.5
Duzib168G1945 Durio zibethinus HOM05D007100 ORTHO05D008958 1.8e-47 193.4 172 69.2
TAR625G1529 Trochodendron aralioides HOM05D007100 ORTHO05D008958 6.9e-47 191.4 215 73.5
Thecc.09G023500 Theobroma cacao HOM05D007100 ORTHO05D008958 1.2e-46 190.7 214 66.4
CSS0035808 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 5.8e-46 188.3 215 70.2
CsaV3_2G032160 Cucumis sativus L. HOM05D007100 ORTHO05D008958 1.7e-45 186.8 214 62.6
Lalb_Chr08g0244131 Lupinus albus HOM05D007100 ORTHO05D008958 1.7e-45 186.8 163 66.9
CSS0028708 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 2.9e-45 186.0 215 70.7
Sabra18G0029100 Salix brachista HOM05D007100 ORTHO05D008958 1.1e-44 184.1 212 59.9
COL.COLO4_18868 Corchorus olitorius HOM05D007100 ORTHO05D008958 1.9e-44 183.3 214 66.4
MD15G1126100 Malus domestica HOM05D007100 ORTHO05D008958 1.9e-44 183.3 210 68.1
Prupe.1G482000 Prunus persica HOM05D007100 ORTHO05D008958 1.9e-44 183.3 211 69.2
Lsat_1_v5_gn_6_21280 Lactuca sativa HOM05D007100 ORTHO05D008958 2.4e-44 183.0 211 67.8
Manes.03G013900 Manihot esculenta HOM05D007100 ORTHO05D008958 4.2e-44 182.2 211 67.8
Migut.A00035 Erythranthe guttata HOM05D007100 ORTHO05D008958 7.1e-44 181.4 212 67.0
MELO3C011269.2 Cucumis melo HOM05D007100 ORTHO05D008958 1.6e-43 180.3 214 62.1
SGA_v2.0_scaffold20G09112 Striga asiatica HOM05D007100 ORTHO05D008958 2.1e-43 179.9 214 67.8
ClCG08G013430 Citrullus lanatus HOM05D007100 ORTHO05D008958 2.7e-43 179.5 167 64.7
PSO210G6161 Papaver somniferum HOM05D007100 ORTHO05D008958 2.7e-43 179.5 216 64.4
Manes.16G122700 Manihot esculenta HOM05D007100 ORTHO05D008958 4.6e-43 178.7 213 64.3
RcHm_v2.0_Chr6g0297791 Rosa chinensis HOM05D007100 ORTHO05D008958 6.0e-43 178.3 210 68.1
CiPaw.03G162500 Carya illinoinensis HOM05D007100 ORTHO05D008958 7.9e-43 177.9 164 64.6
CARHR240140 Cardamine hirsuta HOM05D007100 ORTHO05D008958 2.3e-42 176.4 214 65.0
Lj1g0026662 Lotus japonicus HOM05D007100 ORTHO05D008958 3.0e-42 176.0 170 62.9
FvH4_2g28951 Fragaria vesca HOM05D007100 ORTHO05D008958 3.9e-42 175.6 209 67.5
BcaC09g52005 Brassica carinata HOM05D007100 ORTHO05D008958 5.1e-42 175.3 217 62.7
TWI32G1182 Tripterygium wilfordii HOM05D007100 ORTHO05D008958 6.7e-42 174.9 212 67.0
Atru.chr7.2441 Acer truncatum HOM05D007100 ORTHO05D008958 8.7e-42 174.5 172 62.8
Ah.16g104500 Amaranthus hybridus HOM05D007100 ORTHO05D008958 8.7e-42 174.5 216 63.9
CANSAT25G0532 Cannabis sativa HOM05D007100 ORTHO05D008958 8.7e-42 174.5 175 62.3
FAN20G2791 Fragaria x ananassa HOM05D007100 ORTHO05D008958 1.5e-41 173.7 209 67.0
Aqoxy7G03649 Aquilegia oxysepala HOM05D007100 ORTHO05D008958 3.3e-41 172.6 213 71.4
AL7G19610 Arabidopsis lyrata HOM05D007100 ORTHO05D008958 4.3e-41 172.2 213 65.7
BolC1t00671H Brassica oleracea HOM05D007100 ORTHO05D008958 4.3e-41 172.2 216 62.0
BraA01t00579Z Brassica rapa HOM05D007100 ORTHO05D008958 7.4e-41 171.4 214 58.9
Cfa013136 Carpinus fangiana HOM05D007100 ORTHO05D008958 7.4e-41 171.4 159 65.4
PSO210G2345 Papaver somniferum HOM05D007100 ORTHO05D008958 7.4e-41 171.4 218 63.3
VMungo1309G2169 Vigna mungo HOM05D007100 ORTHO05D008958 7.4e-41 171.4 212 62.3
AT4G32260 Arabidopsis thaliana HOM05D007100 ORTHO05D008958 9.6e-41 171.0 217 66.4
Carub.0007s0834 Capsella rubella HOM05D007100 ORTHO05D008958 9.6e-41 171.0 213 65.3
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla HOM05D007100 ORTHO05D008958 9.6e-41 171.0 161 70.2
QL02p021503 Quercus lobata HOM05D007100 ORTHO05D008958 1.6e-40 170.2 162 61.7
Sed0021254 Sechium edule HOM05D007100 ORTHO05D008958 2.1e-40 169.9 163 62.6
Glyma.04G066000 Glycine max HOM05D007100 ORTHO05D008958 2.8e-40 169.5 212 66.5
AUR62031529 Chenopodium quinoa HOM05D007100 ORTHO05D008958 4.8e-40 168.7 219 61.2
HanXRQChr13g0403031 Helianthus annuus HOM05D007100 ORTHO05D008958 1.1e-39 167.5 160 63.8
PGR044G2669 Punica granatum HOM05D007100 ORTHO05D008958 3.1e-39 166.0 167 71.3
Duzib150G1121 Durio zibethinus HOM05D007100 ORTHO05D008958 5.3e-39 165.2 169 62.7
AUR62012407 Chenopodium quinoa HOM05D007100 ORTHO05D008958 6.9e-39 164.9 152 77.6
Thhalv10026214m.g Eutrema salsugineum HOM05D007100 ORTHO05D008958 1.5e-38 163.7 165 60.6
Sp7g29990 Schrenkiella parvula HOM05D007100 ORTHO05D008958 1.5e-38 163.7 167 60.5
Ah.10g035800 Amaranthus hybridus HOM05D007100 ORTHO05D008958 2.0e-38 163.3 218 61.5
Aa31LG2G17720 Aethionema arabicum HOM05D007100 ORTHO05D008958 2.6e-38 162.9 169 59.8
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 2.6e-38 162.9 170 59.4
ECA233G2559 Erigeron canadensis HOM05D007100 ORTHO05D008958 2.6e-38 162.9 157 67.5
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 3.4e-38 162.5 212 64.6
unitig_32.g11115 Utricularia gibba HOM05D007100 ORTHO05D008958 7.6e-38 161.4 212 61.8
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 1.0e-37 161.0 168 58.3
CDE02G1895 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 1.3e-37 160.6 215 65.6
CDE08G0375 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 1.7e-37 160.2 213 63.8
Eucgr.C02765 Eucalyptus grandis HOM05D007100 ORTHO05D008958 1.7e-37 160.2 179 58.1
Phvul.009G092366 Phaseolus vulgaris HOM05D007100 ORTHO05D008958 2.2e-37 159.8 165 60.0
TPR.G3111 Trifolium pratense HOM05D007100 ORTHO05D008958 1.4e-36 157.1 176 59.7
Glyma.06G067400 Glycine max HOM05D007100 ORTHO05D008958 3.2e-36 156.0 212 65.1
Rhsim02G0202100 Rhododendron simsii HOM05D007100 ORTHO05D008958 3.2e-36 156.0 162 58.6
Nn2g12100 Nelumbo nucifera HOM05D007100 ORTHO05D008958 3.5e-35 152.5 209 63.6
MBI18_g07570_MAGBIO Magnolia biondii HOM05D007100 ORTHO05D008958 6.0e-35 151.8 123 69.9
Nitab4.5_0011986g0010 Nicotiana tabacum HOM05D007100 ORTHO05D008958 3.9e-34 149.1 121 97.5
ATR0800G074 Amborella trichopoda HOM05D007100 ORTHO05D008958 5.1e-34 148.7 137 62.0
Ca_15742_v3 Cicer arietinum L. HOM05D007100 ORTHO05D008958 8.7e-34 147.9 103 80.6
Ciclev10009435m.g Citrus clementina HOM05D007100 ORTHO05D008958 4.3e-33 145.6 216 46.8
EL10Ac2g04205 Beta vulgaris HOM05D007100 ORTHO05D008958 3.1e-31 139.4 221 57.0
Lj7A724T61 Lonicera japonica HOM05D007100 ORTHO05D008958 6.9e-31 138.3 144 57.6
Medtr3g106820 Medicago truncatula HOM05D007100 ORTHO05D008958 1.2e-30 137.5 165 55.2
Sc09g0008150 Simmondsia chinensis HOM05D007100 ORTHO05D008958 7.1e-28 128.3 92 75.0
HPP92_017087 Vanilla planifolia HOM05D007100 ORTHO05D008958 9.3e-28 127.9 162 51.2
Dinv08635 Davidia involucrata HOM05D007100 ORTHO05D008958 6.1e-27 125.2 121 69.4
Os03g0278900 Oryza sativa ssp. japonica HOM05D007100 ORTHO05D008958 2.5e-25 119.8 93 69.9
Zm00001eb397520 Zea mays HOM05D007100 ORTHO05D008958 5.7e-25 118.6 84 76.2
CiPaw.05G145000 Carya illinoinensis HOM05D007100 ORTHO05D008958 3.7e-24 115.9 76 82.9
SMO347G0047 Selaginella moellendorffii HOM05D007100 ORTHO05D008958 3.4e-22 109.4 88 64.8
Nitab4.5_0002042g0090 Nicotiana tabacum HOM05D007100 ORTHO05D008958 3.8e-21 105.9 99 96.0
SEGI_36293 Sequoiadendron giganteum HOM05D007100 ORTHO05D008958 5.0e-21 105.5 93 63.4
AagrBONN_evm.TU.Sc2ySwM_117.789 Anthoceros agrestis HOM05D007100 ORTHO05D008958 1.1e-20 104.4 109 53.2
Pp3c5_7810 Physcomitrium patens HOM05D007100 ORTHO05D008958 1.0e-18 97.8 124 46.8
Pp3c16_15270 Physcomitrium patens HOM05D007100 ORTHO05D008958 3.9e-18 95.9 105 51.4
Mapoly0061s0013 Marchantia polymorpha HOM05D007100 ORTHO05D008958 5.1e-18 95.5 101 53.5
Pp3c6_23221 Physcomitrium patens HOM05D007100 ORTHO05D008958 1.1e-17 94.4 108 49.1
Gohir.A07G028825 Gossypium hirsutum HOM05D007100 ORTHO05D008958 2.5e-17 93.2 99 80.8
Gohir.D07G032851 Gossypium hirsutum HOM05D007100 ORTHO05D008958 2.5e-17 93.2 99 71.7
Sabra06G0199900 Salix brachista HOM05D007100 ORTHO05D008958 4.3e-17 92.4 99 76.8
Cre11.g481450 Chlamydomonas reinhardtii HOM05D007100 ORTHO05D008958 1.8e-15 87.0 115 42.6
HPP92_017015 Vanilla planifolia HOM05D007100 ORTHO05D008958 5.3e-15 85.5 111 50.5
CBR_g39245 Chara braunii HOM05D007100 ORTHO05D008958 3.4e-14 82.8 85 51.8
RcHm_v2.0_Chr4g0429151 Rosa chinensis HOM05D007100 ORTHO05D008958 1.7e-13 80.5 60 68.3
PRCOL_00004936 Prasinoderma coloniale HOM05D007100 ORTHO05D008958 8.5e-13 78.2 85 43.5
MCO01G691 Micromonas commoda HOM05D007100 ORTHO05D008958 2.0e-09 67.0 83 50.6
ATR0743G144 Amborella trichopoda HOM05D007100 ORTHO05D008958 3.1e-07 59.7 99 46.5


User provided reference genes

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