Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003632g0030 Nicotiana tabacum HOM05D005210 ORTHO05D034847 6.4e-79 297.4 151 100.0
Lj6g0026306 Lotus japonicus HOM05D005210 ORTHO05D010080 2.5e-35 152.5 89 79.8
Peaxi162Scf01267g00005 Petunia axillaris HOM05D005210 ORTHO05D010080 6.3e-34 147.9 98 77.6
Medtr6g012880 Medicago truncatula HOM05D005210 ORTHO05D010080 4.1e-33 145.2 92 75.0
TPR.G22447 Trifolium pratense HOM05D005210 ORTHO05D010080 6.9e-33 144.4 90 74.4
GSVIVG01004978001 Vitis vinifera HOM05D005210 ORTHO05D010080 2.0e-32 142.9 76 89.5
TPR.G32363 Trifolium pratense HOM05D005210 ORTHO05D010080 2.6e-32 142.5 89 75.3
Cfa023010 Carpinus fangiana HOM05D005210 ORTHO05D010080 4.5e-32 141.7 89 78.7
Lsat_1_v5_gn_7_109460 Lactuca sativa HOM05D005210 ORTHO05D010080 2.9e-31 139.0 89 70.8
Nitab4.5_0001788g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 2.9e-31 139.0 89 77.5
RcHm_v2.0_Chr2g0148221 Rosa chinensis HOM05D005210 ORTHO05D010080 2.9e-31 139.0 85 78.8
Nitab4.5_0001761g0130 Nicotiana tabacum HOM05D005210 ORTHO05D010080 8.5e-31 137.5 89 76.4
Nitab4.5_0000299g0070 Nicotiana tabacum HOM05D005210 ORTHO05D010080 2.1e-29 132.9 114 61.4
Oeu020894.1 Olea europaea HOM05D005210 ORTHO05D010080 2.7e-29 132.5 89 68.5
Lalb_Chr02g0153671 Lupinus albus HOM05D005210 ORTHO05D010080 3.6e-29 132.1 89 71.9
Oeu061104.1 Olea europaea HOM05D000700 ORTHO05D010080 7.9e-29 131.0 89 68.5
Gohir.A10G199900 Gossypium hirsutum HOM05D005210 ORTHO05D010080 1.4e-28 130.2 116 56.0
Hma1.2p1_0038F.1_g024120 Hydrangea macrophylla HOM05D005210 ORTHO05D010080 1.8e-28 129.8 71 88.7
Gohir.A10G200000 Gossypium hirsutum HOM05D005210 ORTHO05D010080 3.0e-28 129.0 116 55.2
Gohir.D10G207900 Gossypium hirsutum HOM05D005210 ORTHO05D010080 3.0e-28 129.0 99 62.6
AUR62004733 Chenopodium quinoa HOM05D005210 ORTHO05D010080 8.8e-28 127.5 93 64.5
Gorai.011G233600 Gossypium raimondii HOM05D005210 ORTHO05D010080 8.8e-28 127.5 99 61.6
Ca_22167_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 1.5e-27 126.7 79 79.7
Ca_22168_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 1.5e-27 126.7 79 79.7
Ca_22173_v3 Cicer arietinum L. HOM05D005210 ORTHO05D010080 1.5e-27 126.7 79 79.7
MELO3C028549.2 Cucumis melo HOM05D005210 ORTHO05D010080 1.5e-27 126.7 90 72.2
VMungo0329G0007 Vigna mungo HOM05D005210 ORTHO05D010080 1.5e-27 126.7 89 70.8
Atru.chr1.3624 Acer truncatum HOM05D005210 ORTHO05D010080 2.6e-27 125.9 89 69.7
AUR62037526 Chenopodium quinoa HOM05D005210 ORTHO05D010080 3.3e-27 125.6 93 64.5
Ca_15051_v3 Cicer arietinum L. HOM05D001750 ORTHO05D010080 4.4e-27 125.2 79 78.5
Dinv06682 Davidia involucrata HOM05D005210 ORTHO05D010080 2.2e-26 122.9 89 69.7
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 6.3e-26 121.3 80 78.8
Actinidia34888 Actinidia chinensis HOM05D005210 ORTHO05D010080 1.4e-25 120.2 89 68.5
Ciclev10012798m.g Citrus clementina HOM05D005210 ORTHO05D010080 1.8e-25 119.8 89 66.3
CAN.G787.10 Capsicum annuum HOM05D005210 ORTHO05D010080 2.4e-25 119.4 123 52.0
Lalb_Chr03g0038991 Lupinus albus HOM05D005210 ORTHO05D010080 2.4e-25 119.4 78 76.9
MSTRG.20585 Avicennia marina HOM05D005210 ORTHO05D010080 5.3e-25 118.2 116 47.4
PGSC0003DMG400020779 Solanum tuberosum HOM05D005210 ORTHO05D010080 1.2e-24 117.1 65 84.6
Nn1g09997 Nelumbo nucifera HOM05D005210 ORTHO05D010080 2.0e-24 116.3 89 65.2
Nn1g10098 Nelumbo nucifera HOM05D005210 ORTHO05D010080 2.0e-24 116.3 89 65.2
arahy.Tifrunner.gnm1.ann1.00SNP9 Arachis hypogaea HOM05D005210 ORTHO05D010080 1.0e-23 114.0 89 62.9
arahy.Tifrunner.gnm1.ann1.883WGW Arachis hypogaea HOM05D005210 ORTHO05D010080 1.0e-23 114.0 89 62.9
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 1.0e-23 114.0 89 62.9
Ah.03g133380 Amaranthus hybridus HOM05D005210 ORTHO05D010080 1.3e-23 113.6 93 57.0
Cpa.g.sc38.57 Carica papaya HOM05D005210 ORTHO05D010080 1.3e-23 113.6 89 62.9
SGA_v2.0_scaffold119G32726 Striga asiatica HOM05D005210 ORTHO05D010080 1.3e-23 113.6 118 46.6
ECA236G2402 Erigeron canadensis HOM05D005210 ORTHO05D010080 2.2e-23 112.8 90 55.6
DCAR_032434 Daucus carota HOM05D005210 ORTHO05D010080 1.4e-22 110.2 89 61.8
MBI04_g15069_MAGBIO Magnolia biondii HOM05D005210 ORTHO05D010080 1.4e-22 110.2 93 62.4
Potri.007G062102 Populus trichocarpa HOM05D005210 ORTHO05D010080 1.4e-22 110.2 86 69.8
PGR069G0003 Punica granatum HOM05D005210 ORTHO05D010080 2.5e-22 109.4 89 61.8
Migut.B01305 Erythranthe guttata HOM05D005210 ORTHO05D010080 5.5e-22 108.2 116 44.8
Aqoxy4G00327 Aquilegia oxysepala HOM05D005210 ORTHO05D010080 9.4e-22 107.5 91 57.1
SGA_v2.0_scaffold167G38415 Striga asiatica HOM05D005210 ORTHO05D010080 9.4e-22 107.5 118 44.9
SalBow8G1406 Salvia bowleyana HOM05D005210 ORTHO05D010080 1.0e-20 104.0 90 55.6
CANSAT78G1777 Cannabis sativa HOM05D005210 ORTHO05D010080 5.2e-20 101.7 90 57.8
SEGI_01777 Sequoiadendron giganteum HOM05D005210 ORTHO05D010080 5.2e-20 101.7 91 51.6
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 1.1e-19 100.5 63 81.0
CAN.G1109.4 Capsicum annuum HOM05D005210 ORTHO05D010080 2.0e-19 99.8 63 79.4
Ciclev10017151m.g Citrus clementina HOM05D005210 ORTHO05D010080 7.4e-19 97.8 84 61.9
Nitab4.5_0000172g0080 Nicotiana tabacum HOM05D001750 ORTHO05D001825 2.2e-18 96.3 90 58.9
CAN.G110.12 Capsicum annuum HOM05D005210 ORTHO05D010080 3.7e-18 95.5 63 76.2
RcHm_v2.0_MTg0498311 Rosa chinensis HOM05D005210 ORTHO05D010080 1.1e-17 94.0 64 73.4
Phvul.005G088636 Phaseolus vulgaris HOM05D005210 ORTHO05D010080 3.1e-17 92.4 89 55.1
unitig_750.g28447 Utricularia gibba HOM05D005210 ORTHO05D010080 4.1e-17 92.0 90 48.9
Nitab4.5_0006085g0020 Nicotiana tabacum HOM05D005210 ORTHO05D010080 4.5e-16 88.6 111 44.1
COL.COLO4_03970 Corchorus olitorius HOM05D044388 ORTHO05D034847 2.7e-13 79.3 48 83.3
COL.COLO4_04099 Corchorus olitorius HOM05D044388 ORTHO05D034847 2.7e-13 79.3 48 83.3
Peaxi162Scf01462g00001 Petunia axillaris HOM05D005210 ORTHO05D010080 8.8e-12 74.3 52 75.0
QL04p020150 Quercus lobata HOM05D005210 ORTHO05D010080 1.1e-09 67.4 59 61.0
Lalb_Chr03g0038471 Lupinus albus HOM05D005210 ORTHO05D010080 1.3e-07 60.5 33 78.8
Lalb_Chr17g0337341 Lupinus albus HOM05D005210 ORTHO05D010080 1.3e-07 60.5 33 78.8
Nitab4.5_0001152g0440 Nicotiana tabacum HOM05D005210 ORTHO05D010080 3.8e-07 58.9 33 75.8
Nitab4.5_0000593g0150 Nicotiana tabacum HOM05D005210 ORTHO05D010080 9.4e-06 54.3 60 53.3


User provided reference genes

Program Settings