Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 6.5e-142 507.3 241 100.0
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 5.0e-110 401.4 288 70.8
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 8.9e-107 390.6 311 66.6
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 7.8e-103 377.5 311 62.1
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 1.7e-102 376.3 311 63.3
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 2.3e-102 375.9 311 63.3
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 3.0e-102 375.6 300 63.7
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 2.5e-101 372.5 288 65.6
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 2.5e-101 372.5 286 66.1
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 3.3e-101 372.1 291 64.9
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 5.6e-101 371.3 308 63.0
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 9.5e-101 370.5 310 61.9
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 1.2e-100 370.2 285 66.0
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 2.1e-100 369.4 336 57.4
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 2.8e-100 369.0 311 62.7
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 4.7e-100 368.2 281 64.4
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 6.2e-100 367.9 304 62.8
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 1.0e-99 367.1 306 61.8
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.0e-99 367.1 310 62.3
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 1.0e-99 367.1 310 62.3
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 1.4e-99 366.7 303 63.7
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 1.4e-99 366.7 303 62.7
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 1.4e-99 366.7 254 71.7
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 2.3e-99 365.9 311 61.4
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 3.1e-99 365.5 311 62.4
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 3.1e-99 365.5 303 62.0
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 4.0e-99 365.2 303 63.0
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 4.0e-99 365.2 306 62.4
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 5.2e-99 364.8 265 69.1
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 6.8e-99 364.4 306 61.1
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 6.8e-99 364.4 311 61.1
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 1.2e-98 363.6 303 62.4
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 2.0e-98 362.8 295 63.7
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 2.0e-98 362.8 306 62.1
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 2.0e-98 362.8 306 63.1
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 2.6e-98 362.5 295 63.1
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 2.6e-98 362.5 303 62.7
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 5.8e-98 361.3 306 61.8
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 7.5e-98 360.9 266 66.5
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.3e-97 360.1 311 62.1
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.7e-97 359.8 297 62.3
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 2.9e-97 359.0 300 61.3
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 6.4e-97 357.8 295 62.4
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 6.4e-97 357.8 303 61.1
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 1.1e-96 357.1 304 61.2
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.9e-96 356.3 303 62.7
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 3.2e-96 355.5 311 57.9
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 3.2e-96 355.5 311 57.9
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 3.2e-96 355.5 311 57.9
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 3.2e-96 355.5 306 58.8
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 7.0e-96 354.4 311 57.6
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 9.2e-96 354.0 258 67.1
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 1.2e-95 353.6 303 58.7
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 1.2e-95 353.6 303 60.1
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.6e-95 353.2 311 58.8
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 1.6e-95 353.2 306 60.8
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 2.7e-95 352.4 311 57.6
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 2.7e-95 352.4 317 59.0
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 2.7e-95 352.4 301 60.5
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 4.6e-95 351.7 303 61.4
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 6.0e-95 351.3 306 58.8
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 1.0e-94 350.5 306 58.8
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.0e-94 350.5 287 62.7
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 1.3e-94 350.1 276 63.4
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 1.3e-94 350.1 305 58.7
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 3.9e-94 348.6 164 98.8
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 5.0e-94 348.2 306 58.8
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 8.6e-94 347.4 297 60.9
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 1.1e-93 347.1 303 59.4
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 1.9e-93 346.3 303 60.7
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 5.6e-93 344.7 305 58.4
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 7.3e-93 344.4 311 59.2
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 1.6e-92 343.2 307 58.3
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 2.8e-92 342.4 303 58.7
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 5.8e-90 334.7 161 96.3
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 9.8e-90 334.0 358 52.0
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 7.1e-88 327.8 161 93.8
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 2.7e-87 325.9 406 48.0
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 4.3e-85 318.5 156 92.3
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 4.7e-84 315.1 305 54.4
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 6.2e-84 314.7 165 87.3
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 6.2e-84 314.7 164 86.6
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 5.2e-83 311.6 164 88.4
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 5.2e-83 311.6 164 86.6
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.5e-82 310.1 164 87.8
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 2.0e-82 309.7 164 86.0
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 4.4e-82 308.5 164 86.6
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.3e-81 307.0 163 84.7
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 1.7e-81 306.6 157 89.2
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 1.7e-81 306.6 156 88.5
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 2.9e-81 305.8 156 89.1
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 4.9e-81 305.1 156 87.8
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 1.1e-80 303.9 163 84.7
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 1.9e-80 303.1 157 87.9
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.4e-80 302.8 156 87.2
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 9.6e-77 290.8 159 82.4
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 3.6e-76 288.9 264 58.0
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 2.4e-72 276.2 173 76.3
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 2.8e-68 262.7 137 86.9
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 2.0e-66 256.5 302 44.4
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 2.1e-60 236.5 159 70.4
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 4.6e-55 218.8 128 76.6
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 2.8e-52 209.5 104 88.5
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.3e-49 200.7 105 83.8
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 7.6e-42 174.9 228 42.1
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 2.5e-32 143.3 179 48.0
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 7.9e-31 138.3 65 96.9
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 2.6e-26 123.2 62 91.9
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 2.0e-21 107.1 60 75.0
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 1.2e-18 97.8 51 90.2
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 2.0e-18 97.1 51 86.3
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 2.6e-18 96.7 51 88.2
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 5.9e-18 95.5 51 84.3
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 1.3e-17 94.4 51 84.3
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 2.9e-17 93.2 51 84.3
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 5.0e-17 92.4 51 78.4
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 8.5e-17 91.7 51 78.4
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 1.9e-16 90.5 49 77.6
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 5.5e-16 89.0 51 74.5
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 1.6e-15 87.4 66 66.7
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.8e-14 84.0 51 70.6
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 2.3e-14 83.6 49 73.5
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 2.3e-14 83.6 51 72.5
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 4.0e-14 82.8 46 80.4
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 5.2e-14 82.4 48 79.2
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 6.7e-14 82.0 51 70.6
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 7.5e-13 78.6 47 74.5
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 7.5e-13 78.6 49 73.5
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 6.3e-12 75.5 39 87.2
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.8e-11 73.9 50 72.0
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 1.6e-10 70.9 40 80.0
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 5.0e-09 65.9 46 69.6


User provided reference genes

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