Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.1e-46 189.5 91 100.0
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.3e-22 107.8 62 85.5
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.8e-21 104.4 57 89.5
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 2.0e-19 99.0 65 75.4
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 3.4e-19 98.2 60 76.7
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 5.9e-19 97.4 65 73.8
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 7.6e-19 97.1 65 73.8
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 4.2e-17 91.3 52 82.7
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 7.2e-17 90.5 52 76.9
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 7.2e-17 90.5 52 80.8
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 1.2e-16 89.7 52 78.8
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 2.7e-16 88.6 60 66.7
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 3.6e-16 88.2 52 75.0
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 3.6e-16 88.2 65 66.2
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 6.1e-16 87.4 65 66.2
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 7.9e-16 87.0 65 61.5
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 7.9e-16 87.0 52 71.2
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 7.9e-16 87.0 52 71.2
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 7.9e-16 87.0 52 75.0
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 7.9e-16 87.0 52 73.1
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 7.9e-16 87.0 52 76.9
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 7.9e-16 87.0 52 75.0
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 1.0e-15 86.7 52 76.9
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 1.0e-15 86.7 52 75.0
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 1.4e-15 86.3 52 76.9
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 1.4e-15 86.3 52 76.9
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 1.8e-15 85.9 50 80.0
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.8e-15 85.9 60 65.0
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 2.3e-15 85.5 51 76.5
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.0e-15 85.1 70 57.1
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 6.7e-15 84.0 52 71.2
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 6.7e-15 84.0 49 75.5
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 8.8e-15 83.6 60 65.0
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 8.8e-15 83.6 52 75.0
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 8.8e-15 83.6 60 63.3
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 1.5e-14 82.8 52 73.1
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 1.5e-14 82.8 60 61.7
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 1.5e-14 82.8 58 63.8
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 1.9e-14 82.4 65 63.1
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 1.9e-14 82.4 62 64.5
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 2.5e-14 82.0 52 67.3
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 2.5e-14 82.0 49 73.5
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 4.3e-14 81.3 65 61.5
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 4.3e-14 81.3 49 73.5
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 7.4e-14 80.5 61 60.7
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 7.4e-14 80.5 52 69.2
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 9.7e-14 80.1 60 61.7
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 2.2e-13 79.0 52 67.3
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 2.2e-13 79.0 52 65.4
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 2.8e-13 78.6 52 65.4
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 3.7e-13 78.2 52 67.3
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 4.8e-13 77.8 52 63.5
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.8e-13 77.8 74 55.4
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 1.1e-12 76.6 65 56.9
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 1.1e-12 76.6 65 56.9
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 1.1e-12 76.6 65 56.9
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 1.4e-12 76.3 38 92.1
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 1.8e-12 75.9 60 56.7
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 2.4e-12 75.5 51 66.7
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 2.4e-12 75.5 51 62.7
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 2.4e-12 75.5 60 56.7
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 3.1e-12 75.1 45 73.3
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 3.1e-12 75.1 60 56.7
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 3.1e-12 75.1 65 55.4
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 3.1e-12 75.1 65 55.4
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 3.1e-12 75.1 52 59.6
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.1e-12 75.1 38 89.5
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.1e-12 75.1 67 55.2
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 4.1e-12 74.7 60 56.7
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 4.1e-12 74.7 60 56.7
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 5.3e-12 74.3 60 58.3
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 5.3e-12 74.3 72 48.6
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 5.3e-12 74.3 60 55.0
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 6.9e-12 73.9 38 86.8
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 9.1e-12 73.6 60 55.0
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 9.1e-12 73.6 60 55.0
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 1.2e-11 73.2 60 56.7
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 1.2e-11 73.2 60 56.7
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 1.2e-11 73.2 60 56.7
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 1.2e-11 73.2 60 56.7
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 1.2e-11 73.2 60 56.7
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 1.2e-11 73.2 51 68.6
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 1.2e-11 73.2 52 61.5
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 1.2e-11 73.2 73 50.7
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 1.2e-11 73.2 59 59.3
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 1.5e-11 72.8 52 59.6
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 1.5e-11 72.8 60 53.3
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 2.0e-11 72.4 60 55.0
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 2.0e-11 72.4 60 55.0
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 2.0e-11 72.4 60 55.0
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 2.6e-11 72.0 60 55.0
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 2.6e-11 72.0 65 56.9
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 2.6e-11 72.0 60 55.0
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 3.4e-11 71.6 60 53.3
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 4.5e-11 71.2 62 51.6
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 5.9e-11 70.9 63 50.8
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 7.7e-11 70.5 52 61.5
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 7.7e-11 70.5 60 51.7
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 1.0e-10 70.1 60 55.0
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 1.3e-10 69.7 52 67.3
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 1.7e-10 69.3 60 51.7
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 2.2e-10 68.9 60 53.3
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 2.2e-10 68.9 50 62.0
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 2.9e-10 68.6 62 51.6
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 3.8e-10 68.2 66 53.0
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 5.0e-10 67.8 54 59.3
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 8.5e-10 67.0 60 50.0
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 1.1e-09 66.6 62 50.0
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 1.9e-09 65.9 66 51.5
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 5.5e-09 64.3 53 56.6
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 5.5e-09 64.3 66 48.5
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 1.2e-08 63.2 71 45.1
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 2.1e-08 62.4 58 46.6
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 6.1e-08 60.8 62 45.2
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 6.1e-08 60.8 62 45.2
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 6.1e-08 60.8 62 45.2
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 6.1e-08 60.8 62 45.2
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.0e-07 60.1 62 45.2
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 1.4e-07 59.7 51 54.9
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 3.0e-07 58.5 67 49.3
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 3.9e-07 58.2 53 54.7
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 1.5e-06 56.2 51 51.0
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 1.5e-06 56.2 39 61.5
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 5.7e-06 54.3 39 61.5


User provided reference genes

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