Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003610g0010 Nicotiana tabacum HOM05D002916 ORTHO05D003152 1.8e-66 255.8 130 100.0
Nitab4.5_0009023g0020 Nicotiana tabacum HOM05D002916 ORTHO05D003152 1.1e-47 193.4 114 86.8
Atru.chr8.1530 Acer truncatum HOM05D002916 ORTHO05D003152 3.4e-20 102.1 161 42.2
Atru.chr8.1528 Acer truncatum HOM05D002916 ORTHO05D003152 2.9e-19 99.0 162 41.4
Medtr7g104680 Medicago truncatula HOM05D002916 ORTHO05D003152 4.2e-18 95.1 134 44.8
Oeu056929.1 Olea europaea HOM05D002916 ORTHO05D003152 2.3e-16 89.4 160 37.5
Peaxi162Scf00404g00102 Petunia axillaris HOM05D002916 ORTHO05D003152 3.0e-16 89.0 166 41.0
Ciclev10013433m.g Citrus clementina HOM05D002916 ORTHO05D003152 1.5e-15 86.7 167 36.5
TPR.G23310 Trifolium pratense HOM05D002916 ORTHO05D003152 2.5e-15 85.9 137 45.3
Oeu047865.1 Olea europaea HOM05D002916 ORTHO05D003152 4.3e-15 85.1 161 36.0
Rhsim03G0074900 Rhododendron simsii HOM05D002916 ORTHO05D003152 4.3e-15 85.1 165 35.8
Cpa.g.sc5.15 Carica papaya HOM05D002916 ORTHO05D003152 5.6e-15 84.7 171 39.2
Ciclev10012941m.g Citrus clementina HOM05D002916 ORTHO05D003152 1.3e-14 83.6 160 36.9
Duzib093G0112 Durio zibethinus HOM05D002916 ORTHO05D003152 2.8e-14 82.4 162 36.4
MD12G1036700 Malus domestica HOM05D002916 ORTHO05D003152 3.6e-14 82.0 166 38.6
RcHm_v2.0_Chr3g0473821 Rosa chinensis HOM05D002916 ORTHO05D003152 3.6e-14 82.0 162 36.4
FAN02G4366 Fragaria x ananassa HOM05D002916 ORTHO05D003152 4.8e-14 81.6 162 35.8
Prupe.7G109500 Prunus persica HOM05D002916 ORTHO05D003152 4.8e-14 81.6 162 36.4
VMungo1383G0514 Vigna mungo HOM05D002916 ORTHO05D003152 4.8e-14 81.6 166 37.3
Manes.09G055000 Manihot esculenta HOM05D002916 ORTHO05D003152 8.1e-14 80.9 159 36.5
Phvul.001G190500 Phaseolus vulgaris HOM05D002916 ORTHO05D003152 1.4e-13 80.1 165 38.2
Glyma.19G194943 Glycine max HOM05D002916 ORTHO05D003152 1.8e-13 79.7 163 36.2
Gohir.D01G195600 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.4e-13 79.3 164 36.0
Glyma.03G196300 Glycine max HOM05D002916 ORTHO05D003152 3.1e-13 79.0 158 35.4
Gorai.002G239800 Gossypium raimondii HOM05D002916 ORTHO05D003152 3.1e-13 79.0 164 36.0
Manes.08G025700 Manihot esculenta HOM05D002916 ORTHO05D003152 4.0e-13 78.6 163 36.2
Duzib128G0442 Durio zibethinus HOM05D002916 ORTHO05D003152 5.3e-13 78.2 161 35.4
Migut.L01781 Erythranthe guttata HOM05D002916 ORTHO05D003152 5.3e-13 78.2 167 35.9
FvH4_6g18810 Fragaria vesca HOM05D002916 ORTHO05D003152 5.3e-13 78.2 162 35.2
FAN14G1204 Fragaria x ananassa HOM05D002916 ORTHO05D003152 5.3e-13 78.2 162 35.2
Gohir.A01G206200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 5.3e-13 78.2 166 36.1
Actinidia05426 Actinidia chinensis HOM05D002916 ORTHO05D003152 1.2e-12 77.0 166 36.1
Gohir.A04G062400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.6e-12 75.9 167 35.3
COL.COLO4_29727 Corchorus olitorius HOM05D002916 ORTHO05D003152 3.4e-12 75.5 165 36.4
FAN05G3486 Fragaria x ananassa HOM05D002916 ORTHO05D003152 5.8e-12 74.7 165 36.4
FAN05G4254 Fragaria x ananassa HOM05D002916 ORTHO05D003152 5.8e-12 74.7 165 36.4
Gorai.009G402300 Gossypium raimondii HOM05D002916 ORTHO05D003152 5.8e-12 74.7 162 35.8
PGSC0003DMG400008880 Solanum tuberosum HOM05D002916 ORTHO05D003152 5.8e-12 74.7 199 34.2
Aqoxy4G02773 Aquilegia oxysepala HOM05D002916 ORTHO05D003152 7.6e-12 74.3 157 33.1
C05p58000 Brassica napus HOM05D002916 ORTHO05D003152 7.6e-12 74.3 169 32.5
Glyma.10G072400 Glycine max HOM05D002916 ORTHO05D003152 7.6e-12 74.3 162 33.3
Gohir.D04G099400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 7.6e-12 74.3 167 34.7
Potri.006G213100 Populus trichocarpa HOM05D002916 ORTHO05D003152 9.9e-12 73.9 168 36.9
BcaNung06240 Brassica carinata HOM05D002916 ORTHO05D003152 1.3e-11 73.6 169 32.5
BolC5t34456H Brassica oleracea HOM05D002916 ORTHO05D003152 1.3e-11 73.6 168 33.3
AT5G03890 Arabidopsis thaliana HOM05D002916 ORTHO05D003152 1.7e-11 73.2 175 32.6
Carub.0006s0284 Capsella rubella HOM05D002916 ORTHO05D003152 1.7e-11 73.2 174 33.3
Dinv31688 Davidia involucrata HOM05D004140 ORTHO05D006116 1.7e-11 73.2 162 36.4
Eucgr.A02661 Eucalyptus grandis HOM05D002916 ORTHO05D003152 1.7e-11 73.2 134 39.6
Eucgr.K02033 Eucalyptus grandis HOM05D002916 ORTHO05D003152 1.7e-11 73.2 179 33.0
Glyma.13G153800 Glycine max HOM05D002916 ORTHO05D003152 1.7e-11 73.2 162 32.1
Nn2g14164 Nelumbo nucifera HOM05D002916 ORTHO05D003152 1.7e-11 73.2 159 36.5
QL05p034193 Quercus lobata HOM05D002916 ORTHO05D003152 1.7e-11 73.2 162 34.6
AL6G13470 Arabidopsis lyrata HOM05D002916 ORTHO05D003152 2.9e-11 72.4 175 31.4
Ca_09009_v3 Cicer arietinum L. HOM05D002916 ORTHO05D003152 2.9e-11 72.4 162 36.4
Gohir.D09G135200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 3.8e-11 72.0 164 31.1
Thecc.05G089800 Theobroma cacao HOM05D002916 ORTHO05D003152 3.8e-11 72.0 168 35.7
MSTRG.26638 Avicennia marina HOM05D002916 ORTHO05D003152 4.9e-11 71.6 166 32.5
BraA05t22688Z Brassica rapa HOM05D002916 ORTHO05D003152 4.9e-11 71.6 166 32.5
CiPaw.01G252200 Carya illinoinensis HOM05D002916 ORTHO05D003152 4.9e-11 71.6 160 36.2
A05p38970 Brassica napus HOM05D002916 ORTHO05D003152 8.4e-11 70.9 166 32.5
A10p32230 Brassica napus HOM05D002916 ORTHO05D003152 8.4e-11 70.9 174 32.2
BraA10t45266Z Brassica rapa HOM05D002916 ORTHO05D003152 8.4e-11 70.9 174 32.2
Haze_16634 Corylus avellana HOM05D002916 ORTHO05D003152 1.4e-10 70.1 166 37.3
Haze_16636 Corylus avellana HOM05D002916 ORTHO05D003152 1.4e-10 70.1 166 37.3
Lj1g0017693 Lotus japonicus HOM05D002916 ORTHO05D003152 1.4e-10 70.1 167 32.3
C09p73040 Brassica napus HOM05D002916 ORTHO05D003152 1.9e-10 69.7 174 32.2
Gohir.A07G134900 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.9e-10 69.7 164 29.9
DCAR_013390 Daucus carota HOM05D002916 ORTHO05D003152 2.4e-10 69.3 160 31.9
BolC9t60038H Brassica oleracea HOM05D002916 ORTHO05D003152 3.2e-10 68.9 175 32.0
Gorai.006G155100 Gossypium raimondii HOM05D002916 ORTHO05D003152 3.2e-10 68.9 164 30.5
THA.LOC104816397 Tarenaya hassleriana HOM05D002916 ORTHO05D003152 3.2e-10 68.9 182 33.0
Cfa001906 Carpinus fangiana HOM05D002916 ORTHO05D003152 4.2e-10 68.6 165 35.8
TWI53G0172 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 4.2e-10 68.6 164 31.7
MD14G1023400 Malus domestica HOM05D002916 ORTHO05D003152 5.4e-10 68.2 166 33.7
AUR62028520 Chenopodium quinoa HOM05D002916 ORTHO05D003152 7.1e-10 67.8 162 34.6
DCAR_013392 Daucus carota HOM05D002916 ORTHO05D003152 7.1e-10 67.8 166 30.1
Potri.016G079700 Populus trichocarpa HOM05D002916 ORTHO05D003152 7.1e-10 67.8 160 35.0
Ah.15g090860 Amaranthus hybridus HOM05D002916 ORTHO05D003152 1.2e-09 67.0 160 34.4
AT3G10120 Arabidopsis thaliana HOM05D002916 ORTHO05D003152 1.2e-09 67.0 180 30.0
Gohir.A05G000100 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.2e-09 67.0 162 29.6
Nn6g34891 Nelumbo nucifera HOM05D002916 ORTHO05D003152 1.2e-09 67.0 146 32.2
AUR62006186 Chenopodium quinoa HOM05D002916 ORTHO05D003152 1.6e-09 66.6 162 34.0
ECA236G4089 Erigeron canadensis HOM05D002916 ORTHO05D003152 1.6e-09 66.6 140 36.4
Lalb_Chr01g0018131 Lupinus albus HOM05D002916 ORTHO05D003152 1.6e-09 66.6 170 32.9
TWI74G0225 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 1.6e-09 66.6 165 30.3
Lsat_1_v5_gn_5_164861 Lactuca sativa HOM05D002916 ORTHO05D003152 2.1e-09 66.2 146 37.0
Sp3g08400 Schrenkiella parvula HOM05D002916 ORTHO05D003152 2.1e-09 66.2 180 32.2
Sed0018474 Sechium edule HOM05D002916 ORTHO05D003152 2.1e-09 66.2 166 31.3
Hma1.2p1_0084F.1_g043850 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 2.7e-09 65.9 145 34.5
Hma1.2p1_0820F.1_g223855 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 2.7e-09 65.9 145 34.5
Cc06_g05820 Coffea canephora HOM05D002916 ORTHO05D003152 4.6e-09 65.1 158 33.5
DCAR_013389 Daucus carota HOM05D002916 ORTHO05D003152 4.6e-09 65.1 162 34.0
Nitab4.5_0000794g0180 Nicotiana tabacum HOM05D002916 ORTHO05D003152 4.6e-09 65.1 127 35.4
CSS0010688 Camellia sinensis var. sinensis HOM05D002916 ORTHO05D003152 6.0e-09 64.7 109 41.3
CARHR209370 Cardamine hirsuta HOM05D002916 ORTHO05D003152 6.0e-09 64.7 176 29.0
Gohir.A11G003500 Gossypium hirsutum HOM05D002916 ORTHO05D003152 7.8e-09 64.3 156 29.5
BcaB04g21229 Brassica carinata HOM05D002916 ORTHO05D003152 1.3e-08 63.5 177 28.8
DCAR_013391 Daucus carota HOM05D002916 ORTHO05D003152 1.3e-08 63.5 157 29.9
Thhalv10021626m.g Eutrema salsugineum HOM05D002916 ORTHO05D003152 1.3e-08 63.5 182 29.7
AL3G21460 Arabidopsis lyrata HOM05D002916 ORTHO05D003152 1.7e-08 63.2 186 29.6
BcaNung05911 Brassica carinata HOM05D002916 ORTHO05D003152 1.7e-08 63.2 178 30.3
Solyc09g009810.1 Solanum lycopersicum HOM05D002916 ORTHO05D003152 1.7e-08 63.2 199 31.2
Sopen10g032840 Solanum pennellii HOM05D002916 ORTHO05D003152 1.7e-08 63.2 119 45.4
SEGI_19412 Sequoiadendron giganteum HOM05D002916 ORTHO05D003152 2.3e-08 62.8 171 31.6
BcaB01g05762 Brassica carinata HOM05D002916 ORTHO05D003152 3.9e-08 62.0 156 34.6
CARHR084600 Cardamine hirsuta HOM05D002916 ORTHO05D003152 3.9e-08 62.0 181 28.2
DCAR_007755 Daucus carota HOM05D002916 ORTHO05D003152 3.9e-08 62.0 153 34.0
Carub.0008s0814 Capsella rubella HOM05D002916 ORTHO05D003152 5.1e-08 61.6 185 28.6
A03p01480 Brassica napus HOM05D002916 ORTHO05D003152 1.1e-07 60.5 178 28.7
BraA03t09526Z Brassica rapa HOM05D002916 ORTHO05D003152 1.1e-07 60.5 178 28.7
BolC1t05420H Brassica oleracea HOM05D002916 ORTHO05D003152 1.5e-07 60.1 172 30.2
Migut.J01032 Erythranthe guttata HOM05D002916 ORTHO05D003152 1.5e-07 60.1 165 33.9
BcaC09g48115 Brassica carinata HOM05D002916 ORTHO05D003152 1.9e-07 59.7 172 29.7
DCAR_009166 Daucus carota HOM05D002916 ORTHO05D003152 1.9e-07 59.7 164 32.9
Sabra16G0087700 Salix brachista HOM05D002916 ORTHO05D003152 1.9e-07 59.7 162 30.2
C03p01810 Brassica napus HOM05D002916 ORTHO05D003152 2.5e-07 59.3 180 29.4
CANSAT64G0492 Cannabis sativa HOM05D002916 ORTHO05D003152 2.5e-07 59.3 193 31.1
Sabra16G0085600 Salix brachista HOM05D002916 ORTHO05D003152 2.5e-07 59.3 162 31.5
Actinidia31270 Actinidia chinensis HOM05D002916 ORTHO05D003152 3.3e-07 58.9 157 36.3
Thhalv10014801m.g Eutrema salsugineum HOM05D002916 ORTHO05D003152 3.3e-07 58.9 182 31.9
MELO3C024547.2 Cucumis melo HOM05D002916 ORTHO05D003152 4.3e-07 58.5 165 28.5
Zm00001eb197070 Zea mays HOM05D002916 ORTHO05D003152 4.3e-07 58.5 134 33.6
BcaC06g32092 Brassica carinata HOM05D002916 ORTHO05D003152 7.3e-07 57.8 172 31.4
CsaV3_6G040690 Cucumis sativus L. HOM05D002916 ORTHO05D003152 7.3e-07 57.8 165 27.9
PGR004G1189 Punica granatum HOM05D002916 ORTHO05D003152 9.6e-07 57.4 161 31.7
Gohir.A09G139400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.3e-06 57.0 118 32.2
Nitab4.5_0001712g0010 Nicotiana tabacum HOM05D002916 ORTHO05D003152 3.6e-06 55.5 130 40.8
Lsat_1_v5_gn_8_77181 Lactuca sativa HOM05D002916 ORTHO05D003152 6.2e-06 54.7 135 34.1
Sabra06G0164100 Salix brachista HOM05D002916 ORTHO05D003152 6.2e-06 54.7 137 35.0


User provided reference genes

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