Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003598g0110 Nicotiana tabacum HOM05D002859 ORTHO05D003120 2.8e-48 194.9 94 100.0
Nitab4.5_0004387g0010 Nicotiana tabacum HOM05D002859 ORTHO05D003120 1.5e-33 146.0 75 92.0
Nitab4.5_0000079g0100 Nicotiana tabacum HOM05D002859 ORTHO05D003120 2.2e-29 132.1 63 98.4
Nitab4.5_0009853g0030 Nicotiana tabacum HOM05D002859 ORTHO05D003120 8.7e-26 120.2 66 89.4
PGSC0003DMG400001162 Solanum tuberosum HOM05D002859 ORTHO05D003120 1.1e-25 119.8 72 79.2
Nitab4.5_0001106g0150 Nicotiana tabacum HOM05D002859 ORTHO05D003120 7.4e-25 117.1 61 91.8
Solyc08g005060.3 Solanum lycopersicum HOM05D002859 ORTHO05D003120 1.3e-24 116.3 72 77.8
Sopen08g001080 Solanum pennellii HOM05D002859 ORTHO05D003120 2.1e-24 115.5 72 77.8
Lsat_1_v5_gn_4_132200 Lactuca sativa HOM05D002859 ORTHO05D003120 3.2e-20 101.7 89 58.4
Oeu028619.1 Olea europaea HOM05D002859 ORTHO05D003120 1.6e-19 99.4 53 84.9
Dinv22062 Davidia involucrata HOM05D002859 ORTHO05D003120 2.1e-19 99.0 68 66.2
Cc10_g16150 Coffea canephora HOM05D002859 ORTHO05D003120 2.7e-19 98.6 50 94.0
DCAR_014056 Daucus carota HOM05D002859 ORTHO05D003120 2.7e-19 98.6 58 81.0
TAR381G0145 Trochodendron aralioides HOM05D002859 ORTHO05D003120 4.6e-19 97.8 72 69.4
Ah.05g170490 Amaranthus hybridus HOM05D002859 ORTHO05D003120 7.9e-19 97.1 58 77.6
TPR.G25997 Trifolium pratense HOM05D002859 ORTHO05D003120 3.9e-18 94.7 87 57.5
CSS0033199 Camellia sinensis var. sinensis HOM05D002859 ORTHO05D003120 5.1e-18 94.4 67 71.6
VMungo1127G0800 Vigna mungo HOM05D002859 ORTHO05D003120 5.1e-18 94.4 68 64.7
Lj7C415G8 Lonicera japonica HOM05D002859 ORTHO05D003120 1.5e-17 92.8 50 84.0
Actinidia01539 Actinidia chinensis HOM05D002859 ORTHO05D003120 1.9e-17 92.4 53 79.2
MSTRG.25506 Avicennia marina HOM05D002859 ORTHO05D003120 1.9e-17 92.4 72 58.3
CARHR064600 Cardamine hirsuta HOM05D002859 ORTHO05D003120 1.9e-17 92.4 54 83.3
Rhsim12G0001500 Rhododendron simsii HOM05D002859 ORTHO05D003120 3.3e-17 91.7 50 84.0
Thhalv10019211m.g Eutrema salsugineum HOM05D002859 ORTHO05D003120 4.3e-17 91.3 54 81.5
Phvul.011G003500 Phaseolus vulgaris HOM05D002859 ORTHO05D003120 4.3e-17 91.3 53 77.4
Medtr4g035350 Medicago truncatula HOM05D002859 ORTHO05D003120 5.7e-17 90.9 87 54.0
Psat7g149800 Pisum sativum HOM05D002859 ORTHO05D003120 7.4e-17 90.5 61 67.2
Aa31LG4G9230 Aethionema arabicum HOM05D002859 ORTHO05D003120 9.7e-17 90.1 54 79.6
ECA232G0801 Erigeron canadensis HOM05D002859 ORTHO05D003120 9.7e-17 90.1 57 77.2
SalBow7G1103 Salvia bowleyana HOM05D002859 ORTHO05D003120 9.7e-17 90.1 79 58.2
Nn5g27200 Nelumbo nucifera HOM05D002859 ORTHO05D003120 1.3e-16 89.7 69 59.4
vmacro00921 Vaccinium macrocarpon HOM05D002859 ORTHO05D003120 1.3e-16 89.7 75 58.7
vmacro00954 Vaccinium macrocarpon HOM05D002859 ORTHO05D003120 1.3e-16 89.7 75 58.7
Ca_25698_v3 Cicer arietinum L. HOM05D002859 ORTHO05D003120 1.6e-16 89.4 51 78.4
COL.COLO4_25054 Corchorus olitorius HOM05D002859 ORTHO05D003120 1.6e-16 89.4 50 82.0
Cpa.g.sc249.14 Carica papaya HOM05D002859 ORTHO05D003120 2.2e-16 89.0 76 64.5
Thecc.08G165600 Theobroma cacao HOM05D002859 ORTHO05D003120 2.2e-16 89.0 57 73.7
TWI12G1452 Tripterygium wilfordii HOM05D002859 ORTHO05D003120 2.2e-16 89.0 50 78.0
AL2G30910 Arabidopsis lyrata HOM05D002859 ORTHO05D003120 2.8e-16 88.6 53 81.1
arahy.Tifrunner.gnm1.ann1.FCJ5UL Arachis hypogaea HOM05D002859 ORTHO05D003120 3.7e-16 88.2 85 55.3
Eucgr.F04091 Eucalyptus grandis HOM05D002859 ORTHO05D003120 3.7e-16 88.2 65 73.8
Manes.05G123347 Manihot esculenta HOM05D002859 ORTHO05D003120 3.7e-16 88.2 56 76.8
Potri.019G068500 Populus trichocarpa HOM05D002859 ORTHO05D003120 3.7e-16 88.2 62 67.7
Sabra19G0082000 Salix brachista HOM05D002859 ORTHO05D003120 3.7e-16 88.2 70 62.9
arahy.Tifrunner.gnm1.ann1.J0PFQP Arachis hypogaea HOM05D002859 ORTHO05D003120 4.8e-16 87.8 58 72.4
CDE02G3179 Ceratophyllum demersum HOM05D002859 ORTHO05D003120 6.3e-16 87.4 56 75.0
GSVIVG01037132001 Vitis vinifera HOM05D002859 ORTHO05D003120 8.2e-16 87.0 50 82.0
RcHm_v2.0_Chr6g0249441 Rosa chinensis HOM05D002859 ORTHO05D003120 1.1e-15 86.7 80 55.0
AT1G71310 Arabidopsis thaliana HOM05D002859 ORTHO05D003120 1.4e-15 86.3 53 79.2
Haze_14010 Corylus avellana HOM05D002859 ORTHO05D003120 1.4e-15 86.3 48 81.2
Migut.C01404 Erythranthe guttata HOM05D002859 ORTHO05D003120 1.4e-15 86.3 53 71.7
EL10Ac1g01291 Beta vulgaris HOM05D002859 ORTHO05D003120 1.8e-15 85.9 69 58.0
Carub.0002s1818 Capsella rubella HOM05D002859 ORTHO05D003120 1.8e-15 85.9 53 77.4
Ciclev10022444m.g Citrus clementina HOM05D002859 ORTHO05D003120 1.8e-15 85.9 50 84.0
FvH4_2g00170 Fragaria vesca HOM05D002859 ORTHO05D003120 1.8e-15 85.9 101 52.5
FAN16G3232 Fragaria x ananassa HOM05D002859 ORTHO05D003120 1.8e-15 85.9 102 49.0
FAN24G1423 Fragaria x ananassa HOM05D002859 ORTHO05D003120 1.8e-15 85.9 101 52.5
Atru.chr13.2591 Acer truncatum HOM05D002859 ORTHO05D003120 2.4e-15 85.5 56 71.4
BcaB03g15599 Brassica carinata HOM05D002859 ORTHO05D003120 2.4e-15 85.5 54 75.9
Duzib177G0860 Durio zibethinus HOM05D002859 ORTHO05D003120 2.4e-15 85.5 50 78.0
FAN21G0151 Fragaria x ananassa HOM05D002859 ORTHO05D003120 2.4e-15 85.5 99 49.5
FAN25G0127 Fragaria x ananassa HOM05D002859 ORTHO05D003120 2.4e-15 85.5 99 49.5
Gohir.A02G088200 Gossypium hirsutum HOM05D002859 ORTHO05D003120 2.4e-15 85.5 64 60.9
MBI06_g47881_MAGBIO Magnolia biondii HOM05D002859 ORTHO05D003120 2.4e-15 85.5 82 53.7
Sc05g0005770 Simmondsia chinensis HOM05D002859 ORTHO05D003120 3.1e-15 85.1 50 78.0
Zm00001eb366350 Zea mays HOM05D002859 ORTHO05D003120 4.1e-15 84.7 60 63.3
AUR62013398 Chenopodium quinoa HOM05D002859 ORTHO05D003120 5.3e-15 84.3 51 76.5
MD05G1000800 Malus domestica HOM05D002859 ORTHO05D003120 5.3e-15 84.3 79 57.0
BcaC08g45785 Brassica carinata HOM05D002859 ORTHO05D003120 6.9e-15 84.0 53 77.4
A07p30790 Brassica napus HOM05D002859 ORTHO05D003120 6.9e-15 84.0 53 77.4
C06p35690 Brassica napus HOM05D002859 ORTHO05D003120 6.9e-15 84.0 53 77.4
BolC6t38692H Brassica oleracea HOM05D002859 ORTHO05D003120 6.9e-15 84.0 53 77.4
BraA07t30716Z Brassica rapa HOM05D002859 ORTHO05D003120 6.9e-15 84.0 53 77.4
Gohir.D02G103500 Gossypium hirsutum HOM05D002859 ORTHO05D003120 6.9e-15 84.0 65 61.5
Gorai.005G117600 Gossypium raimondii HOM05D002859 ORTHO05D003120 6.9e-15 84.0 65 61.5
ATR1089G066 Amborella trichopoda HOM05D002859 ORTHO05D003120 1.2e-14 83.2 80 51.2
THA.LOC104809758 Tarenaya hassleriana HOM05D002859 ORTHO05D003120 1.2e-14 83.2 52 75.0
CiPaw.04G008400 Carya illinoinensis HOM05D002859 ORTHO05D003120 2.0e-14 82.4 75 58.7
Lj3g0004795 Lotus japonicus HOM05D002859 ORTHO05D003120 3.4e-14 81.6 56 66.1
PSO782G5460 Papaver somniferum HOM05D002859 ORTHO05D003120 3.4e-14 81.6 73 57.5
Sp5g26480 Schrenkiella parvula HOM05D002859 ORTHO05D003120 3.4e-14 81.6 53 75.5
Zm00001eb145940 Zea mays HOM05D002859 ORTHO05D003120 3.4e-14 81.6 80 52.5
QL09p001171 Quercus lobata HOM05D002859 ORTHO05D003120 4.5e-14 81.3 47 74.5
HanXRQChr09g0266881 Helianthus annuus HOM05D002859 ORTHO05D003120 5.9e-14 80.9 83 51.8
Lalb_Chr01g0000171 Lupinus albus HOM05D002859 ORTHO05D003120 5.9e-14 80.9 53 67.9
PSO063G7280 Papaver somniferum HOM05D002859 ORTHO05D003120 5.9e-14 80.9 76 53.9
Peaxi162Scf00078g01124 Petunia axillaris HOM05D002859 ORTHO05D003120 5.9e-14 80.9 117 42.7
CSS0035623 Camellia sinensis var. sinensis HOM05D002859 ORTHO05D003120 1.0e-13 80.1 59 71.2
Prupe.8G001500 Prunus persica HOM05D002859 ORTHO05D003120 1.0e-13 80.1 48 79.2
CSS0008431 Camellia sinensis var. sinensis HOM05D002859 ORTHO05D003120 2.2e-13 79.0 59 69.5
CSS0035791 Camellia sinensis var. sinensis HOM05D002859 ORTHO05D003120 2.2e-13 79.0 59 69.5
CANSAT54G1349 Cannabis sativa HOM05D002859 ORTHO05D003120 3.8e-13 78.2 48 79.2
Glyma.09G234000 Glycine max HOM05D002859 ORTHO05D003120 6.5e-13 77.4 63 58.7
HPP92_001196 Vanilla planifolia HOM05D002859 ORTHO05D003120 6.5e-13 77.4 83 50.6
Aqoxy6G00036 Aquilegia oxysepala HOM05D002859 ORTHO05D003120 9.4e-12 73.6 89 46.1
CSS0010716 Camellia sinensis var. sinensis HOM05D002859 ORTHO05D003120 1.2e-11 73.2 58 69.0
SGA_v2.0_scaffold118G32642 Striga asiatica HOM05D002859 ORTHO05D003120 1.2e-11 73.2 70 55.7
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 1.1e-07 60.1 68 41.2
SEGI_19966 Sequoiadendron giganteum HOM05D002859 ORTHO05D003120 1.4e-07 59.7 43 60.5
AagrBONN_evm.TU.Sc2ySwM_117.3205 Anthoceros agrestis HOM05D002859 ORTHO05D003120 2.4e-07 58.9 48 47.9
SMO358G0157 Selaginella moellendorffii HOM05D002859 ORTHO05D003120 4.1e-07 58.2 48 50.0
Pp3c1_32560 Physcomitrium patens HOM05D002859 ORTHO05D003120 6.9e-07 57.4 62 45.2
Mapoly0077s0052 Marchantia polymorpha HOM05D002859 ORTHO05D003120 2.6e-06 55.5 48 50.0
Psat1g053360 Pisum sativum HOM05D002859 ORTHO05D003120 3.4e-06 55.1 82 34.1
Potri.001G072300 Populus trichocarpa HOM05D002859 ORTHO05D003120 5.9e-06 54.3 48 54.2
SEGI_07111 Sequoiadendron giganteum HOM05D002859 ORTHO05D003120 5.9e-06 54.3 45 53.3
BcaC04g18597 Brassica carinata HOM05D002859 ORTHO05D003120 7.7e-06 53.9 86 37.2


User provided reference genes

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