Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 5.1e-285 983.8 521 100.0
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 6.3e-267 923.7 559 89.6
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 8.0e-246 853.6 565 82.3
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.3e-245 852.0 564 81.2
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 2.0e-212 742.7 475 83.4
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 9.2e-202 707.2 566 68.7
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 1.1e-197 693.7 566 68.4
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 1.9e-194 682.9 569 66.4
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 1.0e-192 677.2 559 66.9
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 1.5e-191 673.3 569 65.9
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.6e-190 669.8 569 66.4
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 8.1e-190 667.5 566 66.3
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 8.1e-190 667.5 565 65.5
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 2.6e-188 662.5 558 65.9
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 3.4e-188 662.1 591 61.8
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 1.7e-187 659.8 565 64.8
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 3.2e-186 655.6 568 64.1
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.2e-186 655.6 534 66.1
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 5.4e-186 654.8 568 64.3
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 9.3e-186 654.1 555 64.5
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 1.2e-185 653.7 563 64.5
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.0e-185 651.4 563 64.5
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 3.0e-184 649.0 559 64.4
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 3.0e-184 649.0 563 62.9
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 5.1e-184 648.3 585 61.5
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.7e-184 647.9 563 64.8
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 1.5e-183 646.7 562 62.3
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.5e-183 646.7 563 64.1
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.9e-183 646.4 568 62.9
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 3.3e-183 645.6 565 61.9
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 4.3e-183 645.2 563 62.5
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.3e-182 643.7 578 62.8
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.3e-182 643.7 563 62.7
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 1.6e-182 643.3 561 62.6
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.1e-181 640.6 564 63.1
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 1.8e-181 639.8 567 62.1
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 3.1e-181 639.0 558 62.9
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 3.1e-181 639.0 567 61.7
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 5.3e-181 638.3 564 62.4
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 6.9e-181 637.9 564 61.2
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 9.0e-181 637.5 562 63.0
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 2.0e-180 636.3 564 62.6
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 2.6e-180 636.0 567 61.4
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 5.8e-180 634.8 568 61.4
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 2.2e-179 632.9 565 63.7
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 2.2e-179 632.9 567 61.6
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 1.1e-178 630.6 566 62.4
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.1e-178 630.6 554 63.4
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.1e-178 630.6 569 62.4
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 3.2e-178 629.0 567 61.2
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 7.1e-178 627.9 572 61.2
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 7.1e-178 627.9 562 60.7
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.2e-177 627.1 557 63.2
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 2.1e-177 626.3 568 60.6
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 7.9e-177 624.4 564 61.0
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 2.3e-176 622.9 562 60.1
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 5.1e-176 621.7 558 62.0
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.9e-175 619.8 560 63.2
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 2.5e-175 619.4 564 61.3
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 4.8e-174 615.1 565 59.5
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.4e-173 613.6 564 60.8
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 3.1e-173 612.5 572 60.3
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 9.0e-173 610.9 567 59.3
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 2.0e-172 609.8 565 59.3
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 3.4e-172 609.0 572 60.1
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 7.6e-172 607.8 559 61.0
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 3.8e-171 605.5 565 59.3
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.1e-170 604.0 566 59.0
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 2.5e-170 602.8 562 60.1
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 3.2e-170 602.4 566 58.5
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 4.2e-170 602.1 567 58.6
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 3.5e-169 599.0 565 58.4
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.0e-168 597.4 562 59.1
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 1.8e-168 596.7 566 58.0
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 5.1e-168 595.1 562 59.3
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 1.5e-167 593.6 560 59.5
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 1.5e-167 593.6 559 58.9
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 2.8e-166 589.3 636 53.9
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.4e-165 587.0 559 58.5
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 4.1e-165 585.5 559 58.3
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 4.1e-165 585.5 528 60.6
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 3.1e-157 559.3 525 60.4
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 1.3e-155 553.9 573 54.3
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 2.9e-155 552.7 559 56.9
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 2.9e-155 552.7 559 56.9
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 1.2e-153 547.4 560 56.2
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 2.1e-153 546.6 565 55.4
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 2.7e-153 546.2 559 55.8
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 2.7e-153 546.2 559 55.8
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 7.9e-153 544.7 559 55.6
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 1.8e-152 543.5 564 54.8
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 3.0e-152 542.7 570 55.3
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 8.0e-145 518.1 520 57.1
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 1.4e-144 517.3 630 49.8
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 8.5e-139 498.0 308 87.0
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 4.8e-134 482.3 483 55.5
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 8.3e-126 454.9 445 59.8
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 1.6e-113 414.1 411 55.0
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.5e-111 407.5 406 57.4
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.9e-98 364.0 581 38.2
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 6.2e-97 359.0 556 40.6
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 2.5e-90 337.0 303 64.0
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 5.1e-83 312.8 585 35.7
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 1.5e-82 311.2 560 37.7
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 4.6e-76 289.7 589 34.8
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 3.6e-73 280.0 252 65.1
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 7.6e-71 272.3 236 63.6
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 9.9e-71 271.9 369 49.1
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 3.2e-69 266.9 225 62.7
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 4.6e-68 263.1 170 85.9
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 5.1e-59 233.0 230 54.8
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 6.3e-49 199.5 210 57.1
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 2.5e-42 177.6 151 62.3
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 2.5e-42 177.6 238 43.3
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 1.0e-38 165.6 593 26.3
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 3.3e-34 150.6 153 62.7
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.0e-22 110.2 69 72.5
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 1.8e-11 75.1 54 75.9
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 1.8e-08 65.1 57 54.4


User provided reference genes

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