Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003567g0090 Nicotiana tabacum HOM05D001221 ORTHO05D009285 5.4e-107 391.0 193 100.0
Nitab4.5_0000008g0890 Nicotiana tabacum HOM05D001221 ORTHO05D009285 2.4e-78 295.8 231 70.1
Nitab4.5_0011703g0010 Nicotiana tabacum HOM05D001221 ORTHO05D009285 1.2e-77 293.5 231 69.3
PGSC0003DMG400008495 Solanum tuberosum HOM05D001221 ORTHO05D009285 2.5e-72 275.8 230 65.7
Sopen09g007240 Solanum pennellii HOM05D001221 ORTHO05D009285 1.3e-71 273.5 230 65.7
CAN.G703.5 Capsicum annuum HOM05D001221 ORTHO05D009285 3.7e-71 271.9 230 64.8
CSS0000018 Camellia sinensis var. sinensis HOM05D001221 ORTHO05D009285 2.0e-56 223.0 230 52.2
CSS0034566 Camellia sinensis var. sinensis HOM05D001221 ORTHO05D009285 2.0e-56 223.0 230 52.2
MD04G1148400 Malus domestica HOM05D001221 ORTHO05D009285 3.1e-54 215.7 235 50.6
RcHm_v2.0_Chr3g0463601 Rosa chinensis HOM05D001221 ORTHO05D009285 4.1e-54 215.3 232 50.0
MD12G1162000 Malus domestica HOM05D001221 ORTHO05D009285 2.6e-53 212.6 235 50.6
Oeu030516.1 Olea europaea HOM05D001221 ORTHO05D009285 2.6e-53 212.6 235 50.2
FvH4_6g11860 Fragaria vesca HOM05D001221 ORTHO05D009285 4.5e-53 211.8 231 49.4
Dinv37071 Davidia involucrata HOM05D001221 ORTHO05D009285 5.9e-53 211.5 230 50.4
Lj2C77T2 Lonicera japonica HOM05D001221 ORTHO05D009285 5.9e-53 211.5 231 48.9
ClCG04G007050 Citrullus lanatus HOM05D001221 ORTHO05D009285 6.5e-52 208.0 232 49.6
FAN02G1926 Fragaria x ananassa HOM05D001221 ORTHO05D009285 6.5e-52 208.0 228 49.1
Actinidia29122 Actinidia chinensis HOM05D001221 ORTHO05D009285 1.1e-51 207.2 230 49.1
FAN14G4172 Fragaria x ananassa HOM05D001221 ORTHO05D009285 2.5e-51 206.1 228 48.7
FAN14G5805 Fragaria x ananassa HOM05D001221 ORTHO05D009285 2.5e-51 206.1 228 48.7
FAN05G4573 Fragaria x ananassa HOM05D001221 ORTHO05D009285 5.5e-51 204.9 228 48.2
Manes.09G103400 Manihot esculenta HOM05D001221 ORTHO05D009285 9.4e-51 204.1 231 47.2
TAR369G0855 Trochodendron aralioides HOM05D001221 ORTHO05D009285 1.2e-50 203.8 230 49.1
Haze_03252 Corylus avellana HOM05D001221 ORTHO05D009285 1.6e-50 203.4 231 49.8
Rhsim05G0207300 Rhododendron simsii HOM05D001221 ORTHO05D009285 1.6e-50 203.4 228 47.8
Cc00_g18180 Coffea canephora HOM05D001221 ORTHO05D009285 2.7e-50 202.6 230 50.0
MSTRG.19022 Avicennia marina HOM05D001221 ORTHO05D009285 6.1e-50 201.4 228 48.2
PGR042G0922 Punica granatum HOM05D001221 ORTHO05D009285 8.0e-50 201.1 230 49.6
Prupe.6G272700 Prunus persica HOM05D001221 ORTHO05D009285 1.0e-49 200.7 235 46.4
Ca_08338_v3 Cicer arietinum L. HOM05D001221 ORTHO05D009285 1.8e-49 199.9 235 48.1
Lalb_Chr07g0193891 Lupinus albus HOM05D001221 ORTHO05D009285 1.8e-49 199.9 231 48.1
Cfa010721 Carpinus fangiana HOM05D001221 ORTHO05D009285 2.3e-49 199.5 231 49.4
Potri.016G112900 Populus trichocarpa HOM05D001221 ORTHO05D009285 4.0e-49 198.7 219 49.3
TWI34G0521 Tripterygium wilfordii HOM05D001221 ORTHO05D009285 4.0e-49 198.7 231 48.9
Medtr7g088170 Medicago truncatula HOM05D001221 ORTHO05D009285 6.8e-49 198.0 234 47.0
Thecc.10G136500 Theobroma cacao HOM05D001221 ORTHO05D009285 6.8e-49 198.0 227 48.5
Atru.chr8.2211 Acer truncatum HOM05D001221 ORTHO05D009285 2.0e-48 196.4 224 47.8
SGA_v2.0_scaffold85G26754 Striga asiatica HOM05D001221 ORTHO05D009285 2.0e-48 196.4 232 47.4
GSVIVG01033992001 Vitis vinifera HOM05D001221 ORTHO05D009285 9.7e-48 194.1 208 49.0
Phvul.002G155200 Phaseolus vulgaris HOM05D001221 ORTHO05D009285 1.3e-47 193.7 232 47.0
VMungo1215G0061 Vigna mungo HOM05D001221 ORTHO05D009285 1.7e-47 193.4 232 46.6
CiPaw.09G207400 Carya illinoinensis HOM05D001221 ORTHO05D009285 2.2e-47 193.0 230 47.0
Sabra16G0108600 Salix brachista HOM05D001221 ORTHO05D009285 2.2e-47 193.0 217 49.3
PSO384G2279 Papaver somniferum HOM05D001221 ORTHO05D009285 2.8e-47 192.6 240 45.4
Glyma.08G119100 Glycine max HOM05D001221 ORTHO05D009285 1.1e-46 190.7 226 47.3
COL.COLO4_02741 Corchorus olitorius HOM05D001221 ORTHO05D009285 1.4e-46 190.3 238 46.2
DCAR_028823 Daucus carota HOM05D001221 ORTHO05D009285 1.4e-46 190.3 226 46.5
MELO3C003302.2 Cucumis melo HOM05D001221 ORTHO05D009285 2.4e-46 189.5 227 46.7
unitig_27.g24844 Utricularia gibba HOM05D001221 ORTHO05D009285 2.4e-46 189.5 231 45.5
TWI60G0701 Tripterygium wilfordii HOM05D001221 ORTHO05D009285 5.3e-46 188.3 232 45.3
Migut.J00190 Erythranthe guttata HOM05D001221 ORTHO05D009285 7.0e-46 188.0 226 45.6
Sed0009696 Sechium edule HOM05D001221 ORTHO05D009285 1.2e-45 187.2 229 48.9
CDE04G2724 Ceratophyllum demersum HOM05D001986 ORTHO05D009285 1.6e-45 186.8 223 45.7
ECA247G4014 Erigeron canadensis HOM05D001221 ORTHO05D009285 1.6e-45 186.8 228 46.5
Lsat_1_v5_gn_9_35920 Lactuca sativa HOM05D001221 ORTHO05D009285 1.6e-45 186.8 231 45.5
CsaV3_4G026220 Cucumis sativus L. HOM05D001221 ORTHO05D009285 5.9e-45 184.9 232 45.7
Psat3g083200 Pisum sativum HOM05D001221 ORTHO05D009285 5.9e-45 184.9 233 45.5
Nn2g14026 Nelumbo nucifera HOM05D001221 ORTHO05D009285 1.0e-44 184.1 226 44.7
Ciclev10011651m.g Citrus clementina HOM05D001221 ORTHO05D009285 2.2e-44 183.0 229 44.5
Gohir.D06G183400 Gossypium hirsutum HOM05D001221 ORTHO05D009285 2.2e-44 183.0 235 44.3
Gorai.010G214400 Gossypium raimondii HOM05D001221 ORTHO05D009285 2.2e-44 183.0 235 44.3
Lj3g0014679 Lotus japonicus HOM05D001221 ORTHO05D009285 2.2e-44 183.0 231 45.0
Gohir.A06G173400 Gossypium hirsutum HOM05D001221 ORTHO05D009285 1.1e-43 180.6 235 43.8
AUR62041939 Chenopodium quinoa HOM05D001221 ORTHO05D009285 4.2e-43 178.7 236 44.9
EL10Ac6g14011 Beta vulgaris HOM05D001221 ORTHO05D009285 3.6e-42 175.6 232 44.4
SHI12823 Sapria himalayana HOM05D001221 ORTHO05D009285 3.6e-42 175.6 223 45.3
AUR62032469 Chenopodium quinoa HOM05D001221 ORTHO05D009285 4.0e-41 172.2 230 43.9
Aqoxy2G03089 Aquilegia oxysepala HOM05D001221 ORTHO05D009285 2.0e-40 169.9 231 42.0
THA.LOC104816213 Tarenaya hassleriana HOM05D001221 ORTHO05D009285 4.9e-39 165.2 224 43.3
Aa31LG3G1560 Aethionema arabicum HOM05D001221 ORTHO05D009285 9.1e-38 161.0 233 39.1
AL3G20060 Arabidopsis lyrata HOM05D001221 ORTHO05D009285 1.6e-37 160.2 223 41.7
Os03g0264700 Oryza sativa ssp. japonica HOM05D001221 ORTHO05D009285 2.0e-37 159.8 239 38.1
BolC5t34539H Brassica oleracea HOM05D001221 ORTHO05D009285 3.5e-37 159.1 226 41.6
AT3G09030 Arabidopsis thaliana HOM05D001221 ORTHO05D009285 4.5e-37 158.7 223 41.3
C05p58870 Brassica napus HOM05D001221 ORTHO05D009285 5.9e-37 158.3 228 41.2
CARHR083370 Cardamine hirsuta HOM05D001221 ORTHO05D009285 7.7e-37 157.9 223 41.7
BcaC05g29636 Brassica carinata HOM05D001221 ORTHO05D009285 1.7e-36 156.8 228 41.2
A05p39830 Brassica napus HOM05D001221 ORTHO05D009285 2.3e-36 156.4 223 40.4
BraA05t22767Z Brassica rapa HOM05D001221 ORTHO05D009285 3.8e-36 155.6 226 41.2
FAN14G0895 Fragaria x ananassa HOM05D001221 ORTHO05D009285 5.0e-36 155.2 193 45.1
Actinidia13771 Actinidia chinensis HOM05D001221 ORTHO05D009285 1.1e-35 154.1 146 52.7
Sp3g07450 Schrenkiella parvula HOM05D001221 ORTHO05D009285 1.5e-35 153.7 227 39.6
Zm00001eb398010 Zea mays HOM05D001221 ORTHO05D009285 1.9e-35 153.3 239 38.1
Carub.0003s0816 Capsella rubella HOM05D001221 ORTHO05D009285 2.5e-35 152.9 225 39.6
Thhalv10020689m.g Eutrema salsugineum HOM05D001221 ORTHO05D009285 1.6e-34 150.2 226 38.1
HPP92_012633 Vanilla planifolia HOM05D001221 ORTHO05D009285 4.9e-31 138.7 231 35.1
Cpa.g.sc106.33 Carica papaya HOM05D001221 ORTHO05D009285 1.3e-28 130.6 131 50.4
ATR0618G243 Amborella trichopoda HOM05D001221 ORTHO05D009285 1.7e-28 130.2 239 38.5
TPR.G23659 Trifolium pratense HOM05D001221 ORTHO05D009285 1.9e-27 126.7 234 36.3
VMungo1080G1832 Vigna mungo HOM05D001221 ORTHO05D009285 5.0e-20 102.1 114 45.6
Hma1.2p1_0244F.1_g101310 Hydrangea macrophylla HOM05D001221 ORTHO05D009285 5.8e-16 88.6 186 35.5
SEGI_02298 Sequoiadendron giganteum HOM05D001221 ORTHO05D009285 8.3e-15 84.7 232 26.7
SEGI_09103 Sequoiadendron giganteum HOM05D001221 ORTHO05D006671 1.0e-12 77.8 222 29.3
Pp3c8_10260 Physcomitrium patens HOM05D001221 ORTHO05D009285 2.5e-11 73.2 227 26.4
Mapoly0022s0093 Marchantia polymorpha HOM05D001221 ORTHO05D009285 1.4e-09 67.4 227 27.3
arahy.Tifrunner.gnm1.ann1.8M171Q Arachis hypogaea HOM05D001221 ORTHO05D009285 6.8e-09 65.1 60 58.3
arahy.Tifrunner.gnm1.ann1.V4YX5W Arachis hypogaea HOM05D001221 ORTHO05D009285 6.8e-09 65.1 60 58.3
BcaB07g31624 Brassica carinata HOM05D001221 ORTHO05D009285 6.8e-09 65.1 123 39.0
ECA247G4058 Erigeron canadensis HOM05D001221 ORTHO05D009285 1.7e-07 60.5 64 51.6
CDE06G2128 Ceratophyllum demersum HOM05D001221 ORTHO05D006671 4.1e-06 55.8 234 21.8
Sabra03G0091900 Salix brachista HOM05D001221 ORTHO05D006671 9.2e-06 54.7 233 24.0


User provided reference genes

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